BLASTX nr result

ID: Coptis24_contig00007130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007130
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [V...   296   3e-78
ref|XP_002522015.1| conserved hypothetical protein [Ricinus comm...   285   1e-74
ref|NP_001242874.1| uncharacterized protein LOC100796154 [Glycin...   283   3e-74
gb|ACU17429.1| unknown [Glycine max]                                  276   4e-72
ref|XP_003590923.1| Ammonium transporter [Medicago truncatula] g...   273   2e-71

>ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [Vitis vinifera]
           gi|296085148|emb|CBI28643.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  296 bits (759), Expect = 3e-78
 Identities = 150/196 (76%), Positives = 169/196 (86%)
 Frame = -3

Query: 769 REAAEVKVIVTPGEVLGRSSNVIPGRGAYLSPQKRTVYASITGTRNFIPPTPNSTDQRPT 590
           +E  E + +VTPGEVLG+ S +  GRGAY  PQ  TVYAS+TG R+ IPP+P S+DQRPT
Sbjct: 2   QEREEAEELVTPGEVLGKGSQLKAGRGAYFLPQNGTVYASLTGRRSLIPPSPLSSDQRPT 61

Query: 589 VEVTGNKAHGAVPEAGSIVIARVVKVMPRMASADIMCVGAKSVREKFNGVIRQQDVRATE 410
           VEVTG+ AHGA+PE GSIVIARV KVM RMASADIMCVG KSVREKF G+IRQQDVRATE
Sbjct: 62  VEVTGHSAHGAIPEPGSIVIARVTKVMARMASADIMCVGPKSVREKFTGIIRQQDVRATE 121

Query: 409 IDKVEMHSSFRPGDVVKAQVLSLGDARAYYLSTAKDELGVVSAESTAGGTMVPISCTEMQ 230
           IDKV+MHSSFRPGD+V+A VLSLGDARAY+LSTAK+ELGVVSAES AG TMVP+S TEMQ
Sbjct: 122 IDKVDMHSSFRPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESAAGATMVPMSWTEMQ 181

Query: 229 CSLTGQIEKRKVAKSG 182
           C LTGQIE+RKVAK G
Sbjct: 182 CPLTGQIEQRKVAKVG 197


>ref|XP_002522015.1| conserved hypothetical protein [Ricinus communis]
           gi|223538819|gb|EEF40419.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 593

 Score =  285 bits (728), Expect = 1e-74
 Identities = 150/206 (72%), Positives = 173/206 (83%), Gaps = 4/206 (1%)
 Frame = -3

Query: 784 RMEVEREAAEVKVIVTPGEVLGRSSNVIPGRGAYLSPQKRT----VYASITGTRNFIPPT 617
           +ME E+E      +VTPGEVLG++S +  G+GAY++P + T    VY+S++G    + PT
Sbjct: 393 KMEGEKEE-----MVTPGEVLGKASELKAGKGAYVAPYRNTDIFYVYSSLSGFLRTLAPT 447

Query: 616 PNSTDQRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMASADIMCVGAKSVREKFNGVI 437
           P+S DQRPTVEVTG KA GAVPEAGS+VIARV KVM +MASADIMCVG KSVREKF G+I
Sbjct: 448 PDSPDQRPTVEVTGLKARGAVPEAGSVVIARVTKVMAKMASADIMCVGPKSVREKFTGLI 507

Query: 436 RQQDVRATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYLSTAKDELGVVSAESTAGGTM 257
           RQQDVRATEIDKV+MH SFRPGD+V+A VLSLGDARAYYLSTAK+ELGVVSAESTAGGTM
Sbjct: 508 RQQDVRATEIDKVDMHLSFRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESTAGGTM 567

Query: 256 VPISCTEMQCSLTGQIEKRKVAKSGN 179
           VPIS TEMQC LTGQIE+RKVAK GN
Sbjct: 568 VPISWTEMQCPLTGQIEQRKVAKLGN 593


>ref|NP_001242874.1| uncharacterized protein LOC100796154 [Glycine max]
           gi|255640712|gb|ACU20640.1| unknown [Glycine max]
          Length = 197

 Score =  283 bits (724), Expect = 3e-74
 Identities = 146/201 (72%), Positives = 169/201 (84%)
 Frame = -3

Query: 781 MEVEREAAEVKVIVTPGEVLGRSSNVIPGRGAYLSPQKRTVYASITGTRNFIPPTPNSTD 602
           ME E+EA    V+VTPGEVLGR+S+V  GRGAY +    TVYAS+TG R+ +PP P+S+D
Sbjct: 1   MEEEKEA----VMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSD 56

Query: 601 QRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMASADIMCVGAKSVREKFNGVIRQQDV 422
            RPTVEVTG+KAHG VP+ GS+VIARV KVM R ASADIMCVG KSVR KF G+IRQQDV
Sbjct: 57  LRPTVEVTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVRGKFTGIIRQQDV 116

Query: 421 RATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYLSTAKDELGVVSAESTAGGTMVPISC 242
           RATEIDKV+MH SF PGD+V+A VLSLGDARAY+LSTAK+ELGVVSAES AG TMVP+S 
Sbjct: 117 RATEIDKVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSW 176

Query: 241 TEMQCSLTGQIEKRKVAKSGN 179
           TEMQC LTGQIE+RKVAK+ +
Sbjct: 177 TEMQCPLTGQIEQRKVAKAAS 197


>gb|ACU17429.1| unknown [Glycine max]
          Length = 189

 Score =  276 bits (706), Expect = 4e-72
 Identities = 142/193 (73%), Positives = 163/193 (84%)
 Frame = -3

Query: 781 MEVEREAAEVKVIVTPGEVLGRSSNVIPGRGAYLSPQKRTVYASITGTRNFIPPTPNSTD 602
           ME E+EA    V+VTPGEVLGR+S+V  GRGAY +    TVYAS+TG R+ +PP P+S+D
Sbjct: 1   MEEEKEA----VMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSD 56

Query: 601 QRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMASADIMCVGAKSVREKFNGVIRQQDV 422
            RPTVEVTG+KAHG VP+ GS+VIARV KVM R ASADIMCVG KSVREKF G+IRQQDV
Sbjct: 57  LRPTVEVTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDV 116

Query: 421 RATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYLSTAKDELGVVSAESTAGGTMVPISC 242
           RATEIDKV+MH SF PGD+V+A VLSLGDARAY+LSTAK+ELGVVSAES AG TMVP+S 
Sbjct: 117 RATEIDKVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSW 176

Query: 241 TEMQCSLTGQIEK 203
           TEMQC LTGQIE+
Sbjct: 177 TEMQCPLTGQIEQ 189


>ref|XP_003590923.1| Ammonium transporter [Medicago truncatula]
           gi|355479971|gb|AES61174.1| Ammonium transporter
           [Medicago truncatula]
          Length = 1109

 Score =  273 bits (699), Expect = 2e-71
 Identities = 141/198 (71%), Positives = 163/198 (82%)
 Frame = -3

Query: 781 MEVEREAAEVKVIVTPGEVLGRSSNVIPGRGAYLSPQKRTVYASITGTRNFIPPTPNSTD 602
           ME ER+      +VTPGEV+G++ +V  GRG Y S    TVYAS+TG R+ IPP  +S D
Sbjct: 1   MEAERD------MVTPGEVIGKTHDVKAGRGTYTSTHNNTVYASLTGFRHTIPPASDSPD 54

Query: 601 QRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMASADIMCVGAKSVREKFNGVIRQQDV 422
           QRP VEVTG+KAHG VPE GS+VI RV KVM ++A ADIMCVG KSVREKF GVIRQQDV
Sbjct: 55  QRPIVEVTGHKAHGPVPEPGSVVIVRVTKVMTKIAEADIMCVGQKSVREKFTGVIRQQDV 114

Query: 421 RATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYLSTAKDELGVVSAESTAGGTMVPISC 242
           RATEIDKV+MH SFRPGD+VKA VLSLG+ARAY+L+TAK+ELGVVSAESTAG T+VPIS 
Sbjct: 115 RATEIDKVDMHLSFRPGDIVKALVLSLGNARAYFLTTAKNELGVVSAESTAGATLVPISW 174

Query: 241 TEMQCSLTGQIEKRKVAK 188
           TEMQC L+GQIE+RKVAK
Sbjct: 175 TEMQCPLSGQIEQRKVAK 192


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