BLASTX nr result

ID: Coptis24_contig00007120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007120
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]     120   9e-25
emb|CBI35491.3| unnamed protein product [Vitis vinifera]              120   9e-25
emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera]   113   8e-23
ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis] gi...   112   2e-22
ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-22

>ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]
          Length = 218

 Score =  120 bits (300), Expect = 9e-25
 Identities = 71/154 (46%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = -1

Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPSPINQASGALSPAARYASIEKTKMPS 572
           PVIIYT+SPK+IHT  S+FM+LVQRLTG S+S  S     SGA+SPAAR+ASIEKTK+ +
Sbjct: 49  PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSA 108

Query: 571 EGDKPRYYSMD---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSF 401
           E +K +         ++E +++G  VER+                          D  S 
Sbjct: 109 EEEKKKKMQSSGDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSL 168

Query: 400 NFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAP 299
           N  HD SP   GNKNY EG ++MPSP STFLS P
Sbjct: 169 NIFHDFSPAVHGNKNYIEG-SFMPSP-STFLSTP 200



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -2

Query: 987 SPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
           SPRREL GPRP PLKVRKDSHKI+KPP+ P
Sbjct: 11  SPRRELLGPRPTPLKVRKDSHKIRKPPVVP 40


>emb|CBI35491.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  120 bits (300), Expect = 9e-25
 Identities = 71/154 (46%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = -1

Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPSPINQASGALSPAARYASIEKTKMPS 572
           PVIIYT+SPK+IHT  S+FM+LVQRLTG S+S  S     SGA+SPAAR+ASIEKTK+ +
Sbjct: 61  PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSA 120

Query: 571 EGDKPRYYSMD---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSF 401
           E +K +         ++E +++G  VER+                          D  S 
Sbjct: 121 EEEKKKKMQSSGDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSL 180

Query: 400 NFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAP 299
           N  HD SP   GNKNY EG ++MPSP STFLS P
Sbjct: 181 NIFHDFSPAVHGNKNYIEG-SFMPSP-STFLSTP 212


>emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera]
          Length = 252

 Score =  113 bits (283), Expect = 8e-23
 Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
 Frame = -1

Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPSPINQASGALSPAARYASIEKTKMPS 572
           PVIIYT+SPK+IHT  S+FM+LVQRLTG S+S  S     SGA+SPAAR+ASIEKTK+ +
Sbjct: 49  PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSA 108

Query: 571 EGDKPRYYSMD---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSF 401
           E +K +         ++E +++G  VER+                          D  S 
Sbjct: 109 EEEKKKKMQSSGDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSL 168

Query: 400 NFLHDLSPMFQGNKNYFEGATYMPSPN 320
           N  HD SP   GNKNY EG ++MPSP+
Sbjct: 169 NIFHDFSPAVHGNKNYIEG-SFMPSPS 194



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -2

Query: 987 SPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
           SPRREL GPRP PLKVRKDSHKI+KPP+ P
Sbjct: 11  SPRRELLGPRPTPLKVRKDSHKIRKPPVVP 40


>ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis]
           gi|223534513|gb|EEF36212.1| Protein MKS1, putative
           [Ricinus communis]
          Length = 254

 Score =  112 bits (279), Expect = 2e-22
 Identities = 76/179 (42%), Positives = 98/179 (54%), Gaps = 24/179 (13%)
 Frame = -1

Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGP--------------STSIP------SPINQA 632
           PVIIYT+SPKVIHTN SDFM+LVQRLTG               STS P      +P N  
Sbjct: 61  PVIIYTVSPKVIHTNPSDFMNLVQRLTGSTSSSSSSSSSSAACSTSNPTSYSSSNPFNDY 120

Query: 631 SGALSPAARYASIEKTKMPSEGDKPRYYSMDSI--LEELDLGPNVERT-XXXXXXXXXXX 461
           SGA+SPAAR+A+IEK K P+E  K +      +   E +++   +ER+            
Sbjct: 121 SGAISPAARFATIEKAKSPNENMKQQVQPSGDVGFFEGIEMSQVMERSGNLFHGILSPAP 180

Query: 460 XXXXXXXXXXXXXXSDHNSFNFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAPI-ASP 287
                         SD N  +FLHDLSP   GN+++ EG T+MPSP++TFLS  + ASP
Sbjct: 181 SSLPPISPNFFSPPSDPNMMSFLHDLSPALHGNRSFLEG-TFMPSPSTTFLSPRLTASP 238



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 30/38 (78%), Positives = 32/38 (84%), Gaps = 3/38 (7%)
 Frame = -2

Query: 1002 PYDKP---SPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
            PYD P   SPR+ELQGPRP  LKVRKDSHKIKKPP+AP
Sbjct: 3    PYDFPVTRSPRKELQGPRPPALKVRKDSHKIKKPPVAP 40


>ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|222843914|gb|EEE81461.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  112 bits (279), Expect = 2e-22
 Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
 Frame = -1

Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPS--PINQASGALSPAARYASIEKTKM 578
           PVIIYT+SPKVIHTN +DFM+LVQRLTG S++  S  P N   GA+SPAAR+A+IEK   
Sbjct: 89  PVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSTSTSSNPFNDDCGAISPAARFATIEKANS 148

Query: 577 PSEGDKPR-----------YYSMDSILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXX 431
           P +  K +              +D ++E   LGP +                        
Sbjct: 149 PKDQQKQQQLGGDLGYVEGIMEIDRVMERPSLGPGI-----------LSPGPASLPPIPP 197

Query: 430 XXXXSDHNSFNFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAPIASP 287
                D NS +F HDLSP+  GN+N+ EG ++MPSP STF+   I SP
Sbjct: 198 NFFSPDQNSVSFFHDLSPILHGNRNFIEG-SFMPSP-STFVWPRINSP 243



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -2

Query: 1032 TDLKMDWPETPYDKPSPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
            T   MD  + P  + SPR+ELQGPRP  LK+RKDSHKI+KPP+AP
Sbjct: 28   TGFSMDSSDFPISR-SPRKELQGPRPPALKIRKDSHKIRKPPVAP 71


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