BLASTX nr result
ID: Coptis24_contig00007120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007120
(1213 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera] 120 9e-25
emb|CBI35491.3| unnamed protein product [Vitis vinifera] 120 9e-25
emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera] 113 8e-23
ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis] gi... 112 2e-22
ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|2... 112 2e-22
>ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]
Length = 218
Score = 120 bits (300), Expect = 9e-25
Identities = 71/154 (46%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Frame = -1
Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPSPINQASGALSPAARYASIEKTKMPS 572
PVIIYT+SPK+IHT S+FM+LVQRLTG S+S S SGA+SPAAR+ASIEKTK+ +
Sbjct: 49 PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSA 108
Query: 571 EGDKPRYYSMD---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSF 401
E +K + ++E +++G VER+ D S
Sbjct: 109 EEEKKKKMQSSGDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSL 168
Query: 400 NFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAP 299
N HD SP GNKNY EG ++MPSP STFLS P
Sbjct: 169 NIFHDFSPAVHGNKNYIEG-SFMPSP-STFLSTP 200
Score = 58.9 bits (141), Expect = 2e-06
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -2
Query: 987 SPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
SPRREL GPRP PLKVRKDSHKI+KPP+ P
Sbjct: 11 SPRRELLGPRPTPLKVRKDSHKIRKPPVVP 40
>emb|CBI35491.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 120 bits (300), Expect = 9e-25
Identities = 71/154 (46%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Frame = -1
Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPSPINQASGALSPAARYASIEKTKMPS 572
PVIIYT+SPK+IHT S+FM+LVQRLTG S+S S SGA+SPAAR+ASIEKTK+ +
Sbjct: 61 PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSA 120
Query: 571 EGDKPRYYSMD---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSF 401
E +K + ++E +++G VER+ D S
Sbjct: 121 EEEKKKKMQSSGDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSL 180
Query: 400 NFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAP 299
N HD SP GNKNY EG ++MPSP STFLS P
Sbjct: 181 NIFHDFSPAVHGNKNYIEG-SFMPSP-STFLSTP 212
>emb|CAN66427.1| hypothetical protein VITISV_029011 [Vitis vinifera]
Length = 252
Score = 113 bits (283), Expect = 8e-23
Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Frame = -1
Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPSPINQASGALSPAARYASIEKTKMPS 572
PVIIYT+SPK+IHT S+FM+LVQRLTG S+S S SGA+SPAAR+ASIEKTK+ +
Sbjct: 49 PVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPLDSGAVSPAARFASIEKTKVSA 108
Query: 571 EGDKPRYYSMD---SILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXXXXXXSDHNSF 401
E +K + ++E +++G VER+ D S
Sbjct: 109 EEEKKKKMQSSGDVDVVEGIEIGGGVERSGWFPGILSPGPSSLPAISPNFFSPGFDPYSL 168
Query: 400 NFLHDLSPMFQGNKNYFEGATYMPSPN 320
N HD SP GNKNY EG ++MPSP+
Sbjct: 169 NIFHDFSPAVHGNKNYIEG-SFMPSPS 194
Score = 58.9 bits (141), Expect = 2e-06
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -2
Query: 987 SPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
SPRREL GPRP PLKVRKDSHKI+KPP+ P
Sbjct: 11 SPRRELLGPRPTPLKVRKDSHKIRKPPVVP 40
>ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis]
gi|223534513|gb|EEF36212.1| Protein MKS1, putative
[Ricinus communis]
Length = 254
Score = 112 bits (279), Expect = 2e-22
Identities = 76/179 (42%), Positives = 98/179 (54%), Gaps = 24/179 (13%)
Frame = -1
Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGP--------------STSIP------SPINQA 632
PVIIYT+SPKVIHTN SDFM+LVQRLTG STS P +P N
Sbjct: 61 PVIIYTVSPKVIHTNPSDFMNLVQRLTGSTSSSSSSSSSSAACSTSNPTSYSSSNPFNDY 120
Query: 631 SGALSPAARYASIEKTKMPSEGDKPRYYSMDSI--LEELDLGPNVERT-XXXXXXXXXXX 461
SGA+SPAAR+A+IEK K P+E K + + E +++ +ER+
Sbjct: 121 SGAISPAARFATIEKAKSPNENMKQQVQPSGDVGFFEGIEMSQVMERSGNLFHGILSPAP 180
Query: 460 XXXXXXXXXXXXXXSDHNSFNFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAPI-ASP 287
SD N +FLHDLSP GN+++ EG T+MPSP++TFLS + ASP
Sbjct: 181 SSLPPISPNFFSPPSDPNMMSFLHDLSPALHGNRSFLEG-TFMPSPSTTFLSPRLTASP 238
Score = 63.5 bits (153), Expect = 1e-07
Identities = 30/38 (78%), Positives = 32/38 (84%), Gaps = 3/38 (7%)
Frame = -2
Query: 1002 PYDKP---SPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
PYD P SPR+ELQGPRP LKVRKDSHKIKKPP+AP
Sbjct: 3 PYDFPVTRSPRKELQGPRPPALKVRKDSHKIKKPPVAP 40
>ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|222843914|gb|EEE81461.1|
predicted protein [Populus trichocarpa]
Length = 263
Score = 112 bits (279), Expect = 2e-22
Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Frame = -1
Query: 751 PVIIYTLSPKVIHTNASDFMSLVQRLTGPSTSIPS--PINQASGALSPAARYASIEKTKM 578
PVIIYT+SPKVIHTN +DFM+LVQRLTG S++ S P N GA+SPAAR+A+IEK
Sbjct: 89 PVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSTSTSSNPFNDDCGAISPAARFATIEKANS 148
Query: 577 PSEGDKPR-----------YYSMDSILEELDLGPNVERTXXXXXXXXXXXXXXXXXXXXX 431
P + K + +D ++E LGP +
Sbjct: 149 PKDQQKQQQLGGDLGYVEGIMEIDRVMERPSLGPGI-----------LSPGPASLPPIPP 197
Query: 430 XXXXSDHNSFNFLHDLSPMFQGNKNYFEGATYMPSPNSTFLSAPIASP 287
D NS +F HDLSP+ GN+N+ EG ++MPSP STF+ I SP
Sbjct: 198 NFFSPDQNSVSFFHDLSPILHGNRNFIEG-SFMPSP-STFVWPRINSP 243
Score = 60.8 bits (146), Expect = 7e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = -2
Query: 1032 TDLKMDWPETPYDKPSPRRELQGPRPAPLKVRKDSHKIKKPPIAP 898
T MD + P + SPR+ELQGPRP LK+RKDSHKI+KPP+AP
Sbjct: 28 TGFSMDSSDFPISR-SPRKELQGPRPPALKIRKDSHKIRKPPVAP 71