BLASTX nr result

ID: Coptis24_contig00007113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007113
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278936.2| PREDICTED: adenylate isopentenyltransferase ...   295   1e-77
emb|CBI32884.3| unnamed protein product [Vitis vinifera]              290   4e-76
emb|CCA29108.1| putative MYB transcription factor [Rosa hybrid c...   268   3e-69
gb|ADN05765.1| MYB transcription factor [Glycine max]                 243   8e-62
ref|XP_003554081.1| PREDICTED: myb family transcription factor A...   243   8e-62

>ref|XP_002278936.2| PREDICTED: adenylate isopentenyltransferase 7, mitochondrial-like
            [Vitis vinifera]
          Length = 422

 Score =  295 bits (756), Expect = 1e-77
 Identities = 164/293 (55%), Positives = 190/293 (64%), Gaps = 16/293 (5%)
 Frame = +2

Query: 227  LYNMYQARKFSTVGLVPHKAHSTEQHTNIGALVESPKHDSAPSGGNGKQRLRWTSELHDR 406
            L+NMY  +KFST  LVPHKA  +E    +GAL  S   +S P+GG+GKQRLRWTS+LHDR
Sbjct: 118  LFNMYHPKKFSTASLVPHKAQGSEPLATVGALGGSSVKNSNPTGGSGKQRLRWTSDLHDR 177

Query: 407  FVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPAXXXXXXXXX 586
            FVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA         
Sbjct: 178  FVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKKG 237

Query: 587  XXXXXXXMDSAPGIQINEALRMQMEVQKXXXXXXXXXXXXXXXXXAQGKYLQKIIEEQQK 766
                   MDSAPG+QINEALR+QMEVQK                 AQGKYLQKIIEEQQK
Sbjct: 238  SGDSGSSMDSAPGVQINEALRLQMEVQKRLHEQLEVQRQLQMRIEAQGKYLQKIIEEQQK 297

Query: 767  LGGVLKASESEQVTKDKQ--QQSPPPPNTIVDPQPPLKKQRVEDRM-------LEPIE-- 913
            LGG LKASE+  +  DKQ   QS P P+  +    P KKQ+V+D M       L+P +  
Sbjct: 298  LGGALKASEAVPLVDDKQNPSQSKPLPDASIGSSSPRKKQKVDDGMTHDCNPPLDPPKPD 357

Query: 914  -----SVGPSRTEKKSDFVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQR 1057
                  + P + + K  F+ +W+ D Y ND V F F +E EFK  +DG   QR
Sbjct: 358  HGCNPPLNPPKPDPKHGFIDRWDRDMYGNDGV-FGFNLEIEFKEQEDGGSEQR 409


>emb|CBI32884.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score =  290 bits (743), Expect = 4e-76
 Identities = 162/290 (55%), Positives = 187/290 (64%), Gaps = 16/290 (5%)
 Frame = +2

Query: 236  MYQARKFSTVGLVPHKAHSTEQHTNIGALVESPKHDSAPSGGNGKQRLRWTSELHDRFVD 415
            MY  +KFST  LVPHKA  +E    +GAL  S   +S P+GG+GKQRLRWTS+LHDRFVD
Sbjct: 1    MYHPKKFSTASLVPHKAQGSEPLATVGALGGSSVKNSNPTGGSGKQRLRWTSDLHDRFVD 60

Query: 416  AITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPAXXXXXXXXXXXX 595
            AITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA            
Sbjct: 61   AITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKKGSGD 120

Query: 596  XXXXMDSAPGIQINEALRMQMEVQKXXXXXXXXXXXXXXXXXAQGKYLQKIIEEQQKLGG 775
                MDSAPG+QINEALR+QMEVQK                 AQGKYLQKIIEEQQKLGG
Sbjct: 121  SGSSMDSAPGVQINEALRLQMEVQKRLHEQLEVQRQLQMRIEAQGKYLQKIIEEQQKLGG 180

Query: 776  VLKASESEQVTKDKQ--QQSPPPPNTIVDPQPPLKKQRVEDRM-------LEPIE----- 913
             LKASE+  +  DKQ   QS P P+  +    P KKQ+V+D M       L+P +     
Sbjct: 181  ALKASEAVPLVDDKQNPSQSKPLPDASIGSSSPRKKQKVDDGMTHDCNPPLDPPKPDHGC 240

Query: 914  --SVGPSRTEKKSDFVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQR 1057
               + P + + K  F+ +W+ D Y ND V F F +E EFK  +DG   QR
Sbjct: 241  NPPLNPPKPDPKHGFIDRWDRDMYGNDGV-FGFNLEIEFKEQEDGGSEQR 289


>emb|CCA29108.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 294

 Score =  268 bits (684), Expect = 3e-69
 Identities = 150/282 (53%), Positives = 183/282 (64%), Gaps = 8/282 (2%)
 Frame = +2

Query: 236  MYQARKFSTVGLVPHKAHSTEQHTNIGALVE-----SPKHDSAPSGGNGKQRLRWTSELH 400
            MY A+KFST  LVPHK  ++EQ  +  ++       S    ++ S GNGKQRLRWTS+LH
Sbjct: 1    MYHAKKFSTASLVPHKPQTSEQLASDSSVKNPTPCASASASASASAGNGKQRLRWTSDLH 60

Query: 401  DRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPAXXXXXXX 580
            DRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA       
Sbjct: 61   DRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEK 120

Query: 581  XXXXXXXXXMDSAPGIQINEALRMQMEVQKXXXXXXXXXXXXXXXXXAQGKYLQKIIEEQ 760
                      DS+PG+QINEALRMQMEVQK                 AQGKYLQKIIEEQ
Sbjct: 121  KGSGDSLSCSDSSPGVQINEALRMQMEVQKRLHEQLEVQRQLQMRIEAQGKYLQKIIEEQ 180

Query: 761  QKLGGVLKASESEQVTKDKQQQS--PPPPNTIVDPQPPLKKQRVEDRM-LEPIESVGPSR 931
            QKLGGVLK S++   ++DKQ+ S    P +       P KK R++D +  +   S  P +
Sbjct: 181  QKLGGVLKGSDALPSSEDKQKLSHLETPGDASTGLSSPRKKHRMDDGLPSDCTTSDLPPK 240

Query: 932  TEKKSDFVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQR 1057
             ++K++FVGQW+ D Y +D  GF F ++ E K  + G  +Q+
Sbjct: 241  GDQKNEFVGQWDRDMYPSD-GGFGFNLQTELKEAEGGGATQK 281


>gb|ADN05765.1| MYB transcription factor [Glycine max]
          Length = 272

 Score =  243 bits (620), Expect = 8e-62
 Identities = 144/280 (51%), Positives = 169/280 (60%), Gaps = 7/280 (2%)
 Frame = +2

Query: 236  MYQARKFSTVGLVPHKAHS-TEQHTNIGALVESPKHDSAPSGGNGKQRLRWTSELHDRFV 412
            MY  +KFS   +VPHK+    EQ  N G L  S    +APSGG+GKQRLRWTS+LHDRFV
Sbjct: 1    MYHTKKFSPASMVPHKSQGGAEQLANAGVLGGSAVKTAAPSGGSGKQRLRWTSDLHDRFV 60

Query: 413  DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA--XXXXXXXXX 586
            DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA           
Sbjct: 61   DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDPKDEKRM 120

Query: 587  XXXXXXXMDSAPGIQINEALRMQMEVQKXXXXXXXXXXXXXXXXXAQGKYLQKIIEEQQK 766
                    DS+ G+ IN+ALRMQMEVQK                 AQGKYLQKIIEEQQK
Sbjct: 121  SGDSISGADSSSGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQK 180

Query: 767  LGGVLKASESEQVTKDK----QQQSPPPPNTIVDPQPPLKKQRVEDRMLEPIESVGPSRT 934
            LG  L  SE+  ++ DK    Q ++    + +     PLKKQR++D   E       +  
Sbjct: 181  LGSTLTTSETLPLSHDKQNYPQSEASGSSDALASTVSPLKKQRIDDGSKEGF----TASQ 236

Query: 935  EKKSDFVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQ 1054
             +K+D VGQ + + Y +   GFD     E K  +D E  Q
Sbjct: 237  VRKNDNVGQLDPNLYDDAGFGFDL----ETKKDEDNESGQ 272


>ref|XP_003554081.1| PREDICTED: myb family transcription factor APL-like [Glycine max]
          Length = 272

 Score =  243 bits (620), Expect = 8e-62
 Identities = 144/280 (51%), Positives = 169/280 (60%), Gaps = 7/280 (2%)
 Frame = +2

Query: 236  MYQARKFSTVGLVPHKAHS-TEQHTNIGALVESPKHDSAPSGGNGKQRLRWTSELHDRFV 412
            MY  +KFS   +VPHK+    EQ  N G L  S    +APSGG+GKQRLRWTS+LHDRFV
Sbjct: 1    MYHTKKFSPASMVPHKSQGGAEQLANAGVLGGSAVKTAAPSGGSGKQRLRWTSDLHDRFV 60

Query: 413  DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA--XXXXXXXXX 586
            DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA           
Sbjct: 61   DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDPKDEKRM 120

Query: 587  XXXXXXXMDSAPGIQINEALRMQMEVQKXXXXXXXXXXXXXXXXXAQGKYLQKIIEEQQK 766
                    DS+ G+ IN+ALRMQMEVQK                 AQGKYLQKIIEEQQK
Sbjct: 121  SGDSISGADSSSGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQK 180

Query: 767  LGGVLKASESEQVTKDK----QQQSPPPPNTIVDPQPPLKKQRVEDRMLEPIESVGPSRT 934
            LG  L  SE+  ++ DK    Q ++    + +     PLKKQR++D   E       +  
Sbjct: 181  LGSTLTTSETLPLSHDKQNHPQSEASGSSDALASTVSPLKKQRIDDGSKEGF----TASQ 236

Query: 935  EKKSDFVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQ 1054
             +K+D VGQ + + Y +   GFD     E K  +D E  Q
Sbjct: 237  VRKNDNVGQLDPNLYDDAGFGFDL----ETKKDEDNESGQ 272


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