BLASTX nr result

ID: Coptis24_contig00007110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007110
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511938.1| Protein ABIL1, putative [Ricinus communis] g...   415   e-113
ref|XP_002320167.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002301384.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_002279419.1| PREDICTED: protein ABIL1 [Vitis vinifera]         397   e-108
emb|CAN69308.1| hypothetical protein VITISV_003083 [Vitis vinifera]   394   e-107

>ref|XP_002511938.1| Protein ABIL1, putative [Ricinus communis]
           gi|223549118|gb|EEF50607.1| Protein ABIL1, putative
           [Ricinus communis]
          Length = 307

 Score =  415 bits (1067), Expect = e-113
 Identities = 210/297 (70%), Positives = 240/297 (80%), Gaps = 1/297 (0%)
 Frame = +2

Query: 107 VEMQQLRTENPSMTFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 286
           +EM+Q + ENP MT+D+VSMERSKSF+KALQELKNLRPQLYSAAEYCEKSYL+SEQKQMV
Sbjct: 1   MEMEQSKPENPHMTYDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMV 60

Query: 287 LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 466
           LDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQT++VST ELKVSC+NQ+LLTC+TYT K
Sbjct: 61  LDNLKDYAVRALVNAVDHLGTVAYKLTDLIEQQTLDVSTMELKVSCINQQLLTCQTYTHK 120

Query: 467 EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 646
           EG+RQQQL   IPRHHKHYILPNS NKKVHFSP IQ +ARQ    A  RL P+G+PAS T
Sbjct: 121 EGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQTDARQIPFQARSRLQPSGSPASKT 180

Query: 647 LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKVSSPRLQ-SAGK 823
           LSWHLASETKSTL G  H+ T  +D +  G +SAVF L D E+   ++ S    Q S+G 
Sbjct: 181 LSWHLASETKSTLKGTSHALTSAEDTKHSGKSSAVFQLFDKEDGTQTRSSGAFTQLSSGA 240

Query: 824 GPSNAVLQTFGATRRDSLENSKPLTPFRSFDNPRRHGTVHVPVRSKSMLSVFFPKHK 994
             S A++QTFG  RR++L++SKPLT FRSFDNPRR   V  P RSKSMLS FF KHK
Sbjct: 241 PASGAIMQTFGVARREALDSSKPLTAFRSFDNPRRE-IVRAPARSKSMLSAFFVKHK 296


>ref|XP_002320167.1| predicted protein [Populus trichocarpa] gi|222860940|gb|EEE98482.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  402 bits (1034), Expect = e-110
 Identities = 209/299 (69%), Positives = 236/299 (78%), Gaps = 3/299 (1%)
 Frame = +2

Query: 107 VEMQQLRTENPSMTFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 286
           +E++Q R ENP+MTFD+VSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYL+SEQKQ V
Sbjct: 2   MELEQTRPENPAMTFDEVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLHSEQKQTV 61

Query: 287 LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 466
           LDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQ +EVST E+KVSC+NQ+ LTC+TYTDK
Sbjct: 62  LDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQALEVSTMEVKVSCMNQQYLTCQTYTDK 121

Query: 467 EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHP--AGTPAS 640
           EG+RQQQL   IPRHHKHY+L NS NKKVHFSPQIQ +ARQ    A  RL P  +G+PAS
Sbjct: 122 EGLRQQQLLAFIPRHHKHYVLQNSVNKKVHFSPQIQTDARQNHFQARSRLQPFASGSPAS 181

Query: 641 NTLSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKVSSPRLQSAG 820
            TLSWHLASETKSTL G  H  T  +D +T G  S VF LLD EE+  ++ S    Q + 
Sbjct: 182 KTLSWHLASETKSTLKGT-HVMTSNEDTKTSGKPSVVFQLLDKEESAKTRSSGAPAQLSS 240

Query: 821 KGP-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPRRHGTVHVPVRSKSMLSVFFPKHK 994
            GP + A++Q FG  RR+  + SKPLTPFRSFDNP RH  V  PVRSKSMLS FF K K
Sbjct: 241 GGPAAGAIMQKFGVPRRELSDGSKPLTPFRSFDNP-RHEIVRAPVRSKSMLSAFFVKQK 298


>ref|XP_002301384.1| predicted protein [Populus trichocarpa] gi|222843110|gb|EEE80657.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  402 bits (1033), Expect = e-109
 Identities = 207/300 (69%), Positives = 235/300 (78%), Gaps = 1/300 (0%)
 Frame = +2

Query: 107  VEMQQLRTENPSMTFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 286
            +E+ Q R ENP+MTFD+VSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYL+SEQKQ V
Sbjct: 1    MELDQTRPENPAMTFDEVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLHSEQKQTV 60

Query: 287  LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 466
            LDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQT +VST E+KVSCLNQ+ LTC+TYT K
Sbjct: 61   LDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTFDVSTMEVKVSCLNQQFLTCQTYTVK 120

Query: 467  EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 646
             G+RQQQL   IPRHHKHYILPNS NKKVHFSPQIQ +ARQ    A  RL  +G+PAS T
Sbjct: 121  GGLRQQQLLAFIPRHHKHYILPNSFNKKVHFSPQIQTDARQNHFQARSRLQLSGSPASKT 180

Query: 647  LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKVSSPRLQSAGKG 826
            LSWHL SETKSTL G  H+ T  +D +  G +SAVF LLD EE+  ++ S    Q + +G
Sbjct: 181  LSWHLVSETKSTLKGTLHAMTSNEDAKASGKSSAVFQLLDEEESRKTRSSGGLAQLSSRG 240

Query: 827  P-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPRRHGTVHVPVRSKSMLSVFFPKHKNKR 1003
            P + A++ TF   RR+ L+ SKPLT FRSFDNP RH  V  PVRSKSMLS FF K K  +
Sbjct: 241  PAAGAIMPTFDVPRRELLDTSKPLTAFRSFDNP-RHEIVRAPVRSKSMLSAFFVKQKTPK 299


>ref|XP_002279419.1| PREDICTED: protein ABIL1 [Vitis vinifera]
          Length = 302

 Score =  397 bits (1019), Expect = e-108
 Identities = 203/302 (67%), Positives = 234/302 (77%), Gaps = 3/302 (0%)
 Frame = +2

Query: 107  VEMQQLRTENPSMTFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 286
            +E+Q+ R E+P+MTFD+VSMERSKSF+KALQELKNLRPQLYSAAEYCEKSYL+SEQKQMV
Sbjct: 1    MELQESRAEHPAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMV 60

Query: 287  LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 466
            LDNLKDYAVRALVNAVDHLGTVAYKLTDL +QQT++VST ELKVSC+NQ+LLTC+TY DK
Sbjct: 61   LDNLKDYAVRALVNAVDHLGTVAYKLTDLLDQQTLDVSTMELKVSCVNQKLLTCQTYMDK 120

Query: 467  EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 646
            EG+RQQQL   IPRHHKHYILPNS NKKVHFS Q+Q +A Q  I A PR++P G   S T
Sbjct: 121  EGIRQQQLLAFIPRHHKHYILPNSVNKKVHFSLQVQRDASQNHIQARPRIYPTGNATSKT 180

Query: 647  LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKVSSPRLQSAGKG 826
            LSWHLASETKSTL G+ ++F  T++P T G TS VFHLLD EE + +    P       G
Sbjct: 181  LSWHLASETKSTLKGSANAFLSTNEPETSGKTSRVFHLLDSEETIRTS-GGPAGGGPSSG 239

Query: 827  P-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPRRH--GTVHVPVRSKSMLSVFFPKHKN 997
            P S+AV Q+ G   RDS E +KP+ PFRSFDN  R      H   RSKS+LS FF K K 
Sbjct: 240  PASSAVTQSLGVVWRDSSEGTKPVMPFRSFDNRNRRPMALAHPAARSKSVLSAFFAKQKT 299

Query: 998  KR 1003
             R
Sbjct: 300  PR 301


>emb|CAN69308.1| hypothetical protein VITISV_003083 [Vitis vinifera]
          Length = 302

 Score =  394 bits (1011), Expect = e-107
 Identities = 201/302 (66%), Positives = 232/302 (76%), Gaps = 3/302 (0%)
 Frame = +2

Query: 107  VEMQQLRTENPSMTFDQVSMERSKSFIKALQELKNLRPQLYSAAEYCEKSYLNSEQKQMV 286
            +E+Q+ R E+P+MTFD+VSMERSKSF+KALQELKNLRPQLYSAAEYCEKSYL+SEQKQMV
Sbjct: 1    MELQESRXEHPAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMV 60

Query: 287  LDNLKDYAVRALVNAVDHLGTVAYKLTDLFEQQTVEVSTTELKVSCLNQRLLTCETYTDK 466
            LDNLKDYAVRALVNAVDHLGTVAYKLTDL +QQT++VST ELKVSC+NQ+LLTC+TY DK
Sbjct: 61   LDNLKDYAVRALVNAVDHLGTVAYKLTDLLDQQTLDVSTMELKVSCVNQKLLTCQTYMDK 120

Query: 467  EGMRQQQLFTIIPRHHKHYILPNSSNKKVHFSPQIQMEARQKLILAGPRLHPAGTPASNT 646
            EG+RQQQL   IPRHHKHYILPNS NKKVHFS Q+Q +A Q    A PR++P G   S T
Sbjct: 121  EGIRQQQLLAFIPRHHKHYILPNSVNKKVHFSXQVQRDASQNXXQARPRIYPTGNATSKT 180

Query: 647  LSWHLASETKSTLNGNQHSFTQTDDPRTMGTTSAVFHLLDGEEAVPSKVSSPRLQSAGKG 826
            LSWHLASETKSTL G+ ++F  T++P T G TS VFHLLD EE + +    P       G
Sbjct: 181  LSWHLASETKSTLKGSANAFLSTNEPETSGKTSRVFHLLDSEEXIRTS-GGPAGGGPSSG 239

Query: 827  P-SNAVLQTFGATRRDSLENSKPLTPFRSFDNPRRH--GTVHVPVRSKSMLSVFFPKHKN 997
            P S+AV Q+ G   RD  E +KP+ PFRSFDN  R      H   RSKS+LS FF K K 
Sbjct: 240  PASSAVTQSLGVVWRDXSEGTKPVMPFRSFDNRNRRPMALAHPAARSKSVLSAFFAKQKT 299

Query: 998  KR 1003
             R
Sbjct: 300  PR 301


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