BLASTX nr result

ID: Coptis24_contig00007103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007103
         (1616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]   153   1e-34
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-25
emb|CBI15337.3| unnamed protein product [Vitis vinifera]              117   9e-24
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-15
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    88   7e-15

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score =  153 bits (387), Expect = 1e-34
 Identities = 116/379 (30%), Positives = 186/379 (49%), Gaps = 8/379 (2%)
 Frame = +2

Query: 308  ELISDILSRLPMEDVLRFRSVSKEWYALTTDSAFIQMHLKRASC-LPRRIFLEAKTNVDL 484
            ++++DILS LP+ED+LR RSV K WY LT DS F ++  +R    +PR +F+    N   
Sbjct: 23   DIMADILSLLPIEDILRCRSVCKTWYGLTKDSYFFKLQFRRTFYHMPRLMFISKSEN--- 79

Query: 485  HEEDHGPIASLCLLETVNGMWRGKEIPVANMPGDHFFTLCSCNGLLCVTAKTCVDPLFIY 664
                     S+ LL+      + +EI +  + G +   + SCNGLLC+ ++   +P+ I 
Sbjct: 80   ---------SVFLLD--GKQCKAREIALPTVLGRNLIVMSSCNGLLCLASEESPNPVIIS 128

Query: 665  NPIRRECVELPETCIEVESSLISVGFGFDDTTXXXXXXXXXXXXSGDDPCTRGEIITLGE 844
            NPI R+ + LPE+     S +  VG G+D               S     TR EIITLGE
Sbjct: 129  NPITRKYIVLPESVNASYSFIQLVGLGYDPWNMKYKVVRSYIDNS---KFTRFEIITLGE 185

Query: 845  GSWRELELSGRVVSGFNEKPAFSDGAFHWVSEKE---SQSGCERILVLDIYDEKFQTIRI 1015
             SWR+L++  RVV G N +P + +GA +W+ +K+      GC  IL  D+ +EKF  I +
Sbjct: 186  ASWRQLDVPCRVVCGRNSRPIYCEGALYWILDKKFHYDGDGC--ILAFDLREEKFGMIAL 243

Query: 1016 PSSVIRAFKYP---SEARXXXXXXXXXXVEHELWERFCIWRIVRSSETRKDYKFYKSSHS 1186
            P ++      P   + +           V  +  +   IW+++R+ +     ++ +S   
Sbjct: 244  PPNIRMPTGNPGLYNGSLHLLNVAGCLTVIADECQFLHIWQVMRNRDRGFSVRYRRSDMH 303

Query: 1187 LNFSKAYRNDIFSIK-LQDMLIDNKFLFHVRFINLRGREQKKDHLSLYLPEKGEYQVVEV 1363
              +S      +FS   L D   D+  L   +F    G   ++D L  Y PE+ +Y    +
Sbjct: 304  CRWS------VFSQPVLLDWCKDSLLLSVSKF----GVYSERD-LVEYFPERKQYAGHHI 352

Query: 1364 LGAPTFFQPNLFIPSLVSP 1420
             G P +F+   F P+L+SP
Sbjct: 353  RGLPKWFRSCSFKPNLISP 371


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  122 bits (307), Expect = 2e-25
 Identities = 104/390 (26%), Positives = 170/390 (43%), Gaps = 12/390 (3%)
 Frame = +2

Query: 290  KASLLPELISDILSRLPMEDVLRFRSVSKEWYALTTDSAFIQMHLKRASCLPRRIFLEAK 469
            +A L PE+  ++L+RLP+E +LRFRSV K W  +     FI + L      P R  +++ 
Sbjct: 18   EAILPPEMFCEVLARLPVESILRFRSVCKSWCRMIQSPYFISLQLGVTKNKPCRFIVQS- 76

Query: 470  TNVDLHEEDHGPIASLCLLETVNGMWRGKEIPVANMPGDHFFTL------CSCNGLLCVT 631
                   +  G ++SL L++  +   R  ++          F L      C C+G LC+ 
Sbjct: 77   -------QREGDMSSLYLVDIEDLKAREIQLEKIKCRTRLKFKLPALGVRCFCDGFLCMA 129

Query: 632  AKTCVDPLFIYNPIRRECVELPETCIEVESSLISVGFGFDDTTXXXXXXXXXXXXSGDDP 811
            ++  +DP+ I NPI +E V LP +  +       + FGFD ++            S +  
Sbjct: 130  SEKRLDPVCICNPITKESVILPLSRSKAHLVRHKLAFGFDQSS-GKYKVIRDYRTSSNKH 188

Query: 812  CTRGEIITLGEGSWRELELSGRVVSGFNEKPAFSDGAFHWVSEKESQSGCERILVLDIYD 991
             ++ +IITLGE SWR+L     + +   +   F +G+ HW+ + ++    E IL  D+  
Sbjct: 189  LSKFQIITLGESSWRQLNPPQNLCTSDWDAAVFWNGSLHWIIDDKTID--EPILAFDLSS 246

Query: 992  EKFQTIRIPSSVIRAFKYPSEARXXXXXXXXXXVEHELWERFCIWRIVR------SSETR 1153
            E F TI      +    Y  +            VEH       IW +        S+  R
Sbjct: 247  ETFYTIPFHRLCLSHECYELQV----LGASLTIVEHNS-HMIKIWEVAGNKVKGFSANCR 301

Query: 1154 KDYKFYKSSHSLNFSKAYRNDIFSIKLQDMLIDNKFLFHVRFINLRGREQKKDHLSLYLP 1333
            +++  Y   +   F K              L    F+  V FI+   +  KKD  + ++P
Sbjct: 302  EEHDTYVCWNKYLFYKTI----------SQLSHKSFMLQVCFID--NKNVKKDWFTRFVP 349

Query: 1334 EKGEYQVVEVLGAPTFFQPNLFIPSLVSPH 1423
            EK +Y   ++LG P  F  + F PS VSP+
Sbjct: 350  EKAQYFHQDILGLPEHFNTDHFKPSFVSPN 379


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  117 bits (293), Expect = 9e-24
 Identities = 115/397 (28%), Positives = 172/397 (43%), Gaps = 6/397 (1%)
 Frame = +2

Query: 248  DGEYTTCVCTGDVKKASLLPELISDILSRLPMEDVLRFRSVSKEWYALTTDSAFIQMHLK 427
            DG  +T    G V    LLPELIS+ILSRLP+E +LR RSV K W ++     FI +  +
Sbjct: 139  DGRASTTKKDGPVN--DLLPELISEILSRLPIELILRCRSVCKTWNSVIQSPLFINLQAR 196

Query: 428  RASCLPRRIFLE----AKTNVDLHEEDHGPIASLCLLETVNGMWRGKEIPVANMPGDHFF 595
            ++   P R+ L+      T   +H        SL LL+T     + + I   +       
Sbjct: 197  KSHNQPSRVILKPIFGGVTATTMH--------SLFLLDTEER--KSRRIHDKSWRFSGLQ 246

Query: 596  TLCSCNGLLCVTAKTCVDPLFIYNPIRRECVELPETCIEVESSLI--SVGFGFDDTTXXX 769
             + SCNGLLC+T+ + + P++I NPI RE V LP    E   SL+   VG GFD +    
Sbjct: 247  IMSSCNGLLCITSDSELGPVYISNPITREFVILPSP--ETGFSLLRHQVGLGFDSSNGKY 304

Query: 770  XXXXXXXXXSGDDPCTRGEIITLGEGSWRELELSGRVVSGFNEKPAFSDGAFHWVSEKES 949
                     S      + E I LGE SWR L +   +         F +GA HW  +K  
Sbjct: 305  IVVRAYTDKS-KSQVNKFEAIMLGENSWRSLTVPDIIAECTINGSVFWNGALHWKIKK-- 361

Query: 950  QSGCERILVLDIYDEKFQTIRIPSSVIRAFKYPSEARXXXXXXXXXXVEHELWERFCIWR 1129
            + G E +L  D+   KF   R P S       P +            V+     +  IWR
Sbjct: 362  KPGRECMLSFDVSSGKFAVTRFPVSA----DVPDDFEMVELDGHLSLVQ-VYDTQMKIWR 416

Query: 1130 IVRSSETRKDYKFYKSSHSLNFSKAYRNDIFSIKLQDMLIDNKFLFHVRFINLRGREQKK 1309
             V   +       Y+  + +N      N  F+ ++    ID  +L  V      G   ++
Sbjct: 417  -VTGEKIEGLSVCYEDMYCMN---VRWNSSFNCEIIRGYIDEGYLLQVNTHRGPGGAWRR 472

Query: 1310 DHLSLYLPEKGEYQVVEVLGAPTFFQPNLFIPSLVSP 1420
             +L+ Y P+  ++  + +   P  F+   F P+L+SP
Sbjct: 473  -YLTQYFPKMEQFLSLIIPSIPICFKTISFRPTLISP 508


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
            predicted protein [Populus trichocarpa]
          Length = 364

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 12/247 (4%)
 Frame = +2

Query: 296  SLLPE-LISDILSRLPMEDVLRFRSVSKEWYALTTDSAFIQMHLKRA----SCLPRRIFL 460
            S LP+ +I DIL+ LP++ ++RF+ V K W  L +D  F+++HLKRA    +   +R+ +
Sbjct: 2    SKLPQDIIVDILTYLPVKSLVRFKCVCKPWQLLISDPRFVKLHLKRAIEGNNINRQRLLV 61

Query: 461  EAK---TNVDLHEEDHGP-IASLCLLETVNGMWRGKEIPVANMPGDHFFTLCSCNGLLCV 628
             A+   ++VD      G  I ++  L   +   R +    A++ G       SC+GL+C+
Sbjct: 62   AAEPLYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRG-------SCDGLVCI 114

Query: 629  TAKTCVDPLFIYNPIRRECVELPETCIEVESSLISVGFGFDDT-TXXXXXXXXXXXXSGD 805
                 V  +F++NP  RE  +LP+    V+      G G+D T              +G 
Sbjct: 115  RNGGDVHDMFLWNPSTRESKKLPKPSSSVQKHGFLTGLGYDSTIDDYKLVIACLTTANGS 174

Query: 806  DPCTRGEIITLGEGSWRELELSGRVVSGFNEKPAFSDGAFHWVSEKE--SQSGCERILVL 979
                  E+ TL   SWR ++     ++       F +GA HW+ ++E  +    + I  L
Sbjct: 175  HQIMAPEVFTLKTNSWRRIQGIHSGITLEGGAGVFWNGALHWLGKQETGADHDVDVIFSL 234

Query: 980  DIYDEKF 1000
            D+  EKF
Sbjct: 235  DVAQEKF 241


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
            gi|223534840|gb|EEF36529.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 371

 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 31/318 (9%)
 Frame = +2

Query: 308  ELISDILSRLPMEDVLRFRSVSKEWYALTTDSAFIQMHLKRA----------SCLPRRIF 457
            E++ +IL RLP++ +L++R V + W++L T+S+FI  H+  +          + + ++  
Sbjct: 8    EILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYALVKQKSV 67

Query: 458  LEAKTNVDLHEEDHGPIASLCLLETVNGMWRGKEIPVANMPGDHFFTLCSCNGLLCVTAK 637
             + K    L+ +D        + + ++  ++G+          +   + SCNGL+C++  
Sbjct: 68   PDCKERFILYIDDDSGDEPFRVYQELDFPFKGER---------YLEIISSCNGLVCLSDS 118

Query: 638  TCVDPLFIYNPIRRECVELPETCIEVESSLISVGFGFDDTTXXXXXXXXXXXXSGDDPCT 817
                  +++NP+ R+C+    T +  +SS I VGFGF+                  +P  
Sbjct: 119  QYA-RFYLWNPVIRKCL----TILSSDSSFI-VGFGFEYKKNDYKVVKIMHHPEKMNPVL 172

Query: 818  RGEIITLGEGSWRELELSGRVVSGF---NEKPAFSDGAFHWVSEKESQSGCERILVL--- 979
              +I  L   +WR + +  R +  F   + K A+S+G FHW++    + G    L L   
Sbjct: 173  IVKIYDLSTSAWRSITVENRTLLNFCFGDRKRAYSNGVFHWLARAPGKEGSPDKLTLASF 232

Query: 980  DIYDEKFQTIRIPSSVIRAFKYPSEARXXXXXXXXXXVEHELW------------ERFCI 1123
            D+ DE F+ +  P  + +  +  +             ++H  W            E  CI
Sbjct: 233  DLGDEVFREMMFPDDLAQVNE--NHLSLVVYGESLALLQHLSWKSDDFSWSLGYYESCCI 290

Query: 1124 WRIVRSSETR---KDYKF 1168
            W + +  E R   K Y F
Sbjct: 291  WVLKKHGEGRSWSKQYTF 308


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