BLASTX nr result

ID: Coptis24_contig00007080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007080
         (3250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328530.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-87
ref|NP_001131372.2| uncharacterized protein LOC100192697 [Zea ma...   144   7e-84
gb|ACG25627.1| hypothetical protein [Zea mays]                        142   4e-83
ref|XP_002463858.1| hypothetical protein SORBIDRAFT_01g007660 [S...   140   1e-82
ref|XP_003559312.1| PREDICTED: uncharacterized protein LOC100838...   140   2e-81

>ref|XP_002328530.1| predicted protein [Populus trichocarpa] gi|222838245|gb|EEE76610.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  155 bits (393), Expect(3) = 1e-87
 Identities = 75/129 (58%), Positives = 91/129 (70%)
 Frame = +3

Query: 2325 WFNDCHGWLYNVSLIVPSVFFLVYLALQAKKSFTKLFHGRSYIMITYYGLLWAVSLLNLA 2504
            W  +CHG+L+N  LI+ S+ F++YLA QAKKSF KL +GRS IMI YY  LW VSLLN A
Sbjct: 36   WLVECHGFLHNAILILTSLAFVIYLAFQAKKSFRKLSNGRSSIMIAYYCSLWLVSLLNFA 95

Query: 2505 WCAFQPWECTTGKEFSWNLLSLFTTSGMXXXXXXXXXXXXQGSYASGLDALTRTFVISGI 2684
            W  FQ WECT GKE SWN+LSLFTTSGM            QG+YASGL+ LT+ F +S +
Sbjct: 96   WSCFQAWECTPGKELSWNILSLFTTSGMLFLEVSLIAFLLQGNYASGLEDLTQPFGVSAL 155

Query: 2685 ILSVDILLK 2711
            I+ +DI LK
Sbjct: 156  IVGLDIFLK 164



 Score =  126 bits (317), Expect(3) = 1e-87
 Identities = 56/82 (68%), Positives = 70/82 (85%)
 Frame = +1

Query: 2770 VDILLKAIYVFGFGVPLFIDLDGVTNPVKWGLWVIHKLLLTAVYGIIFSMHHTKWRERLP 2949
            +DI LKA+Y+FGFG+PLFID    ++ +KW LWVIH+L+LTAVYG+I  M+H+KWRERLP
Sbjct: 159  LDIFLKAVYLFGFGIPLFIDSSDHSHRMKWSLWVIHRLVLTAVYGLIMFMYHSKWRERLP 218

Query: 2950 ARPAFYNYICMMFCLSATALFA 3015
            ARPAFYNYI +MF L+A ALFA
Sbjct: 219  ARPAFYNYIAIMFILNALALFA 240



 Score = 92.0 bits (227), Expect(3) = 1e-87
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = +3

Query: 3096 CVLVASGAGFGFWLYNFTTICYHAFYLPLIYVTFLADFFQEDDLHLENVYY 3248
            C L   GAGFG+WLY  T +CYHAFYLPL+YVTFLADFFQE+ L+LENVYY
Sbjct: 241  CALTGHGAGFGYWLYGITIVCYHAFYLPLLYVTFLADFFQEEGLNLENVYY 291


>ref|NP_001131372.2| uncharacterized protein LOC100192697 [Zea mays]
            gi|195623886|gb|ACG33773.1| hypothetical protein [Zea
            mays] gi|238908575|gb|ACF79758.2| unknown [Zea mays]
            gi|413933025|gb|AFW67576.1| hypothetical protein
            ZEAMMB73_442285 [Zea mays]
          Length = 303

 Score =  144 bits (362), Expect(3) = 7e-84
 Identities = 65/130 (50%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
 Frame = +3

Query: 2325 WFNDCHGWLYNVSLIVPSVFFLVYLALQAKKSFTKLFHGRSYIMIT-YYGLLWAVSLLNL 2501
            W ++CHG LYN++L++PS+ F+ +LA QA++SF +L +GRS++++  YY LLWAV++LNL
Sbjct: 34   WASECHGVLYNLALMLPSLAFVGFLAWQARRSFRRLSYGRSHVVVVAYYALLWAVAVLNL 93

Query: 2502 AWCAFQPWECTTGKEFSWNLLSLFTTSGMXXXXXXXXXXXXQGSYASGLDALTRTFVISG 2681
             WC  Q W+C   + FSWN+LSLFT SGM            QG+ ASG ++L RTFVISG
Sbjct: 94   LWCFLQAWQCMPDRAFSWNILSLFTKSGMLFLEVSLIAFLLQGNDASGFESLARTFVISG 153

Query: 2682 IILSVDILLK 2711
             +++ D+LLK
Sbjct: 154  AVVAADVLLK 163



 Score =  121 bits (303), Expect(3) = 7e-84
 Identities = 52/80 (65%), Positives = 67/80 (83%)
 Frame = +1

Query: 2773 DILLKAIYVFGFGVPLFIDLDGVTNPVKWGLWVIHKLLLTAVYGIIFSMHHTKWRERLPA 2952
            D+LLK IYVFGFGVPLFID D  T+  KWGLW++HKL+LT VYG+I  MHH++WR+RLPA
Sbjct: 159  DVLLKTIYVFGFGVPLFIDTDQGTSG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPA 217

Query: 2953 RPAFYNYICMMFCLSATALF 3012
            +PA+YNY+C+M  L+  +LF
Sbjct: 218  KPAYYNYVCVMLLLNGISLF 237



 Score = 96.7 bits (239), Expect(3) = 7e-84
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +3

Query: 3096 CVLVASGAGFGFWLYNFTTICYHAFYLPLIYVTFLADFFQEDDLHLENVYY 3248
            C L+ASGAGFG WLYN TT+CYH+ YLPL+YVTFLADFFQE+D+ LENVYY
Sbjct: 239  CFLIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYY 289


>gb|ACG25627.1| hypothetical protein [Zea mays]
          Length = 303

 Score =  142 bits (359), Expect(3) = 4e-83
 Identities = 64/130 (49%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
 Frame = +3

Query: 2325 WFNDCHGWLYNVSLIVPSVFFLVYLALQAKKSFTKLFHGRSYIMIT-YYGLLWAVSLLNL 2501
            W ++CHG LYN++L++PS+ F+ +LA QA++SF +L +GRS++++  YY LLWAV++LNL
Sbjct: 34   WASECHGVLYNLALMLPSLAFVGFLAWQARRSFRRLSYGRSHVVVVAYYALLWAVAVLNL 93

Query: 2502 AWCAFQPWECTTGKEFSWNLLSLFTTSGMXXXXXXXXXXXXQGSYASGLDALTRTFVISG 2681
             WC  Q W+C   + FSWN+LSLFT SGM            QG+ ASG ++L RTFV+SG
Sbjct: 94   LWCFLQAWQCMPDRAFSWNVLSLFTKSGMLFLEVSLIAFLLQGNDASGFESLARTFVLSG 153

Query: 2682 IILSVDILLK 2711
             +++ D+LLK
Sbjct: 154  AVVAADVLLK 163



 Score =  121 bits (303), Expect(3) = 4e-83
 Identities = 52/80 (65%), Positives = 67/80 (83%)
 Frame = +1

Query: 2773 DILLKAIYVFGFGVPLFIDLDGVTNPVKWGLWVIHKLLLTAVYGIIFSMHHTKWRERLPA 2952
            D+LLK IYVFGFGVPLFID D  T+  KWGLW++HKL+LT VYG+I  MHH++WR+RLPA
Sbjct: 159  DVLLKTIYVFGFGVPLFIDTDQGTSG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPA 217

Query: 2953 RPAFYNYICMMFCLSATALF 3012
            +PA+YNY+C+M  L+  +LF
Sbjct: 218  KPAYYNYVCVMLLLNGISLF 237



 Score = 95.5 bits (236), Expect(3) = 4e-83
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = +3

Query: 3096 CVLVASGAGFGFWLYNFTTICYHAFYLPLIYVTFLADFFQEDDLHLENVYY 3248
            C ++ASGAGFG WLYN TT+CYH+ YLPL+YVTFLADFFQE+D+ LENVYY
Sbjct: 239  CFVIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYY 289


>ref|XP_002463858.1| hypothetical protein SORBIDRAFT_01g007660 [Sorghum bicolor]
            gi|241917712|gb|EER90856.1| hypothetical protein
            SORBIDRAFT_01g007660 [Sorghum bicolor]
          Length = 303

 Score =  140 bits (353), Expect(3) = 1e-82
 Identities = 63/130 (48%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
 Frame = +3

Query: 2325 WFNDCHGWLYNVSLIVPSVFFLVYLALQAKKSFTKLFHGRSYIMIT-YYGLLWAVSLLNL 2501
            W ++CHG LY++++++PS+ F+ +LA QA++SF +L +GRS++++  YY LLWAV++LNL
Sbjct: 34   WASECHGVLYSLAVMLPSLAFVGFLAWQARRSFRRLSYGRSHVVVVAYYALLWAVAVLNL 93

Query: 2502 AWCAFQPWECTTGKEFSWNLLSLFTTSGMXXXXXXXXXXXXQGSYASGLDALTRTFVISG 2681
             WC  Q W+C   + FSWN+LSLFT SGM            QG+ ASG ++L RTFVISG
Sbjct: 94   LWCFLQAWQCMPDRAFSWNVLSLFTKSGMLFLEISLIAFLLQGNDASGFESLARTFVISG 153

Query: 2682 IILSVDILLK 2711
             +++ D+LLK
Sbjct: 154  AVVAADVLLK 163



 Score =  120 bits (302), Expect(3) = 1e-82
 Identities = 52/80 (65%), Positives = 66/80 (82%)
 Frame = +1

Query: 2773 DILLKAIYVFGFGVPLFIDLDGVTNPVKWGLWVIHKLLLTAVYGIIFSMHHTKWRERLPA 2952
            D+LLK IYVFGFGVPLFID+D  T   KWGLW++HKL+LT VYG+I  MHH++WR+RLPA
Sbjct: 159  DVLLKTIYVFGFGVPLFIDVDQGTGG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPA 217

Query: 2953 RPAFYNYICMMFCLSATALF 3012
            +PA+YNY+C M  L+  +LF
Sbjct: 218  KPAYYNYVCAMLLLNGLSLF 237



 Score = 96.7 bits (239), Expect(3) = 1e-82
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +3

Query: 3096 CVLVASGAGFGFWLYNFTTICYHAFYLPLIYVTFLADFFQEDDLHLENVYY 3248
            C L+ASGAGFG WLYN TT+CYH+ YLPL+YVTFLADFFQE+D+ LENVYY
Sbjct: 239  CFLIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYY 289


>ref|XP_003559312.1| PREDICTED: uncharacterized protein LOC100838035 [Brachypodium
            distachyon]
          Length = 307

 Score =  140 bits (353), Expect(3) = 2e-81
 Identities = 64/133 (48%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
 Frame = +3

Query: 2316 TKRWFNDCHGWLYNVSLIVPSVFFLVYLALQAKKSFTKLFHGRSYIMIT-YYGLLWAVSL 2492
            T  W + CHG LY++++++PS+ F+ +LA QA++SF +L +GRS++++  YY LLWAV++
Sbjct: 35   TMWWVSGCHGTLYSLAVMLPSLAFVGFLAWQARRSFRRLSYGRSHVVVVAYYALLWAVAV 94

Query: 2493 LNLAWCAFQPWECTTGKEFSWNLLSLFTTSGMXXXXXXXXXXXXQGSYASGLDALTRTFV 2672
            LNL WC  Q W+C   + FSWN+LSLFT SGM            QG+ ASG ++L RTFV
Sbjct: 95   LNLLWCFLQVWQCMPDRAFSWNVLSLFTKSGMLFLEVSLIAFLLQGNEASGFESLARTFV 154

Query: 2673 ISGIILSVDILLK 2711
            ISG +++ D+LLK
Sbjct: 155  ISGAVVTADVLLK 167



 Score =  118 bits (295), Expect(3) = 2e-81
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 2773 DILLKAIYVFGFGVPLFIDLDGVTNPVKWGLWVIHKLLLTAVYGIIFSMHHTKWRERLPA 2952
            D+LLK IYVFGFGVPLFID D  T   KWGLW++HKL+LT VYG+I  MHH++WR+RLPA
Sbjct: 163  DVLLKTIYVFGFGVPLFIDADQGTGG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPA 221

Query: 2953 RPAFYNYICMMFCLSATALF 3012
            +PA+Y+Y+C M  L+  +LF
Sbjct: 222  KPAYYHYVCAMLVLNGLSLF 241



 Score = 95.1 bits (235), Expect(3) = 2e-81
 Identities = 40/51 (78%), Positives = 45/51 (88%)
 Frame = +3

Query: 3096 CVLVASGAGFGFWLYNFTTICYHAFYLPLIYVTFLADFFQEDDLHLENVYY 3248
            C LVA GAGFG WLYN TT+CYH+ YLPL+YVTFLADFFQE+D+ LENVYY
Sbjct: 243  CFLVACGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYY 293


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