BLASTX nr result

ID: Coptis24_contig00007071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007071
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY86036.1| pyruvate dehydrogenase, partial [Citrus x paradisi]    368   1e-99
ref|XP_003519292.1| PREDICTED: pyruvate dehydrogenase E1 compone...   367   2e-99
gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium h...   365   7e-99
dbj|BAC57468.1| pyruvate dehydrogenase E1alpha subunit [Beta vul...   365   7e-99
gb|AAW83831.1| E1 alpha subunit of pyruvate dehydrogenase [Petun...   363   5e-98

>gb|AAY86036.1| pyruvate dehydrogenase, partial [Citrus x paradisi]
          Length = 395

 Score =  368 bits (944), Expect = 1e-99
 Identities = 188/257 (73%), Positives = 199/257 (77%)
 Frame = +2

Query: 2   KYKKDGCVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPA 181
           KY KD  VTF LYGDGAANQGQLFEALN+AALWDLPAILVCENNHYGMGTAEWRAAKSP+
Sbjct: 188 KYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPS 247

Query: 182 YYKRGDYVPGLKVDGMDALXHLQDNEFTGSVIS*RTSSLLICI*LTMWKVKAICYQSVQR 361
           YYKRGDYVPGLKV                                               
Sbjct: 248 YYKRGDYVPGLKV----------------------------------------------- 260

Query: 362 MVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 541
             DGMDALAVKQACKFAKE+AL NGP+ILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE
Sbjct: 261 --DGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 318

Query: 542 RDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMPDPSELFTNVYVKGY 721
           RDPIERIRKLILAH+L+TEK+LKDIEK  RKEVDEAIAKAKESPMP+PSELFTNVYVKGY
Sbjct: 319 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDEAIAKAKESPMPEPSELFTNVYVKGY 378

Query: 722 GVESYGADRKELRATLP 772
           GVE +GADRKE+R+ LP
Sbjct: 379 GVEVFGADRKEVRSVLP 395


>ref|XP_003519292.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1,
           mitochondrial-like [Glycine max]
          Length = 396

 Score =  367 bits (942), Expect = 2e-99
 Identities = 184/257 (71%), Positives = 199/257 (77%)
 Frame = +2

Query: 2   KYKKDGCVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPA 181
           KY KD  VTF +YGDGAANQGQLFEALN+AALWDLPAILVCENNHYGMGTAEWRAAKSPA
Sbjct: 189 KYSKDESVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPA 248

Query: 182 YYKRGDYVPGLKVDGMDALXHLQDNEFTGSVIS*RTSSLLICI*LTMWKVKAICYQSVQR 361
           YYKRGDYVPGLKV                                               
Sbjct: 249 YYKRGDYVPGLKV----------------------------------------------- 261

Query: 362 MVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 541
             DGMD LAVKQACKFAKE+AL NGP+ILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE
Sbjct: 262 --DGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 319

Query: 542 RDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMPDPSELFTNVYVKGY 721
           RDPIER+RKL+L+H+++ EK+LKDIEK  RKEVDEAIAKAKESPMPDPS+LFTNVYVKGY
Sbjct: 320 RDPIERVRKLVLSHDIAAEKELKDIEKEVRKEVDEAIAKAKESPMPDPSDLFTNVYVKGY 379

Query: 722 GVESYGADRKELRATLP 772
           GVE++GADRKE+RATLP
Sbjct: 380 GVETFGADRKEVRATLP 396


>gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium hirsutum]
          Length = 394

 Score =  365 bits (938), Expect = 7e-99
 Identities = 186/257 (72%), Positives = 199/257 (77%)
 Frame = +2

Query: 2   KYKKDGCVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPA 181
           KY KD  VTF LYGDGAANQGQLFEALN++ALWDLPAILVCENNHYGMGTAEWRAAKSPA
Sbjct: 187 KYSKDETVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAAKSPA 246

Query: 182 YYKRGDYVPGLKVDGMDALXHLQDNEFTGSVIS*RTSSLLICI*LTMWKVKAICYQSVQR 361
           YYKRGDYVPGLKV                                               
Sbjct: 247 YYKRGDYVPGLKV----------------------------------------------- 259

Query: 362 MVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 541
             DGMDALAVKQACKFAKE+AL NGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE
Sbjct: 260 --DGMDALAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 317

Query: 542 RDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMPDPSELFTNVYVKGY 721
           RDPIERIRKLIL+H+L+TEK+LKD+EK  RKEVD+AIA+AKESPMP+PSELFTNVY KG 
Sbjct: 318 RDPIERIRKLILSHDLATEKELKDVEKEVRKEVDDAIAQAKESPMPEPSELFTNVYAKGL 377

Query: 722 GVESYGADRKELRATLP 772
           GVES+GADRKE+RATLP
Sbjct: 378 GVESFGADRKEVRATLP 394


>dbj|BAC57468.1| pyruvate dehydrogenase E1alpha subunit [Beta vulgaris]
          Length = 395

 Score =  365 bits (938), Expect = 7e-99
 Identities = 184/257 (71%), Positives = 196/257 (76%)
 Frame = +2

Query: 2   KYKKDGCVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPA 181
           KY K+ CV+F LYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSP+
Sbjct: 188 KYNKEDCVSFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPS 247

Query: 182 YYKRGDYVPGLKVDGMDALXHLQDNEFTGSVIS*RTSSLLICI*LTMWKVKAICYQSVQR 361
           YYKRGDYVPGLKV                                               
Sbjct: 248 YYKRGDYVPGLKV----------------------------------------------- 260

Query: 362 MVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 541
             DGMD LAVKQACKFAKEY L NGPIILEMDTYRYHGHSMSDPGSTYRTRDEISG+RQE
Sbjct: 261 --DGMDVLAVKQACKFAKEYVLKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGIRQE 318

Query: 542 RDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMPDPSELFTNVYVKGY 721
           RDPIER+RKL+LAH+++ EK+LKDIEK  RKEVDEAIAKAKESPMPD SELFTN+YVKGY
Sbjct: 319 RDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAIAKAKESPMPDTSELFTNIYVKGY 378

Query: 722 GVESYGADRKELRATLP 772
           GVES+GADRK LR TLP
Sbjct: 379 GVESFGADRKVLRTTLP 395


>gb|AAW83831.1| E1 alpha subunit of pyruvate dehydrogenase [Petunia x hybrida]
          Length = 390

 Score =  363 bits (931), Expect = 5e-98
 Identities = 187/257 (72%), Positives = 198/257 (77%)
 Frame = +2

Query: 2   KYKKDGCVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPA 181
           KY K+  VTF +YGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSP+
Sbjct: 183 KYSKEDHVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPS 242

Query: 182 YYKRGDYVPGLKVDGMDALXHLQDNEFTGSVIS*RTSSLLICI*LTMWKVKAICYQSVQR 361
           YYKRGDYVPGLKV                                               
Sbjct: 243 YYKRGDYVPGLKV----------------------------------------------- 255

Query: 362 MVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 541
             DGMDALAVKQACKFAKE+AL NGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE
Sbjct: 256 --DGMDALAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 313

Query: 542 RDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMPDPSELFTNVYVKGY 721
           RDPIERIRKLILAH+++TEK+LKDIEK  RK VDEAIAKAKES MPDPSELFTNVYVKG+
Sbjct: 314 RDPIERIRKLILAHDIATEKELKDIEKEKRKIVDEAIAKAKESAMPDPSELFTNVYVKGF 373

Query: 722 GVESYGADRKELRATLP 772
           GVE+ GADRKE+RATLP
Sbjct: 374 GVEACGADRKEVRATLP 390


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