BLASTX nr result

ID: Coptis24_contig00007044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007044
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS52645.1| GEM-like 1 [Vitis vinifera]                            347   4e-93
gb|ACU23491.1| unknown [Glycine max]                                  346   6e-93
ref|XP_003526540.1| PREDICTED: GEM-like protein 1-like [Glycine ...   344   2e-92
ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]            344   2e-92
ref|XP_003602953.1| GLABRA2 expression modulator [Medicago trunc...   338   1e-90

>gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  347 bits (889), Expect = 4e-93
 Identities = 178/261 (68%), Positives = 199/261 (76%), Gaps = 32/261 (12%)
 Frame = -3

Query: 946 SSDYAPYPKLNSEDTTPP--------IFGSDP-----NKPGPVSES-------------- 848
           S+DYAPYPKL+  D  PP        I    P     N   P+SES              
Sbjct: 21  SADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPAPIARNSAT 80

Query: 847 -----NNPYITASPAPSSSVKITVDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAP 683
                +NPYI++SPAP+SS+K  +DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT P
Sbjct: 81  TMPVESNPYISSSPAPASSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGP 140

Query: 682 SVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLS 503
           S  DAA+GRIAQ TKVLAEGGY+KIFQQTFETVPEEQL KSYACYLSTSAGPVMGILYLS
Sbjct: 141 SFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLS 200

Query: 502 TAKLAFSSDSPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHE 323
           T KLAF SDSPLSYK G++TEWSYYKVVIPLHQ KA+NTS SK NPAEKY+QIISVDNHE
Sbjct: 201 TEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHE 260

Query: 322 FWYMGFVNYDNAVNSLQEALQ 260
           FW+MGFV+YD+AV +LQ ALQ
Sbjct: 261 FWFMGFVHYDSAVKNLQGALQ 281


>gb|ACU23491.1| unknown [Glycine max]
          Length = 269

 Score =  346 bits (887), Expect = 6e-93
 Identities = 167/238 (70%), Positives = 194/238 (81%), Gaps = 8/238 (3%)
 Frame = -3

Query: 949 HSSDYAPYPKLNSEDTTPPIFGSDPNKPGPVSES--------NNPYITASPAPSSSVKIT 794
           HS DYAPYPKL+  D  PP    +     P+SE         +NPY+T +PA +SS K T
Sbjct: 30  HSGDYAPYPKLDPTDVAPPQQPLNTESRAPISEDAATTMPKDSNPYVTPAPATASSTKTT 89

Query: 793 VDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAPSVTDAAMGRIAQSTKVLAEGGYD 614
           +DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT PS  DAA+GRIAQ TKVLAEGGY+
Sbjct: 90  LDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYE 149

Query: 613 KIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLSTAKLAFSSDSPLSYKEGDKTEWS 434
           KIF+QTFETVPEEQLLK+YACYLSTSAGPVMG+LYLSTAKLAF SD+PLSY+ GD+T+WS
Sbjct: 150 KIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQVGDQTQWS 209

Query: 433 YYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHEFWYMGFVNYDNAVNSLQEALQ 260
           YYKVVIPLHQ +A+N S SK N +EKYIQIISVDNHEFW+MGFV+YD+AV ++Q ALQ
Sbjct: 210 YYKVVIPLHQLRAVNASTSKTNQSEKYIQIISVDNHEFWFMGFVHYDSAVKNIQGALQ 267


>ref|XP_003526540.1| PREDICTED: GEM-like protein 1-like [Glycine max]
          Length = 269

 Score =  344 bits (883), Expect = 2e-92
 Identities = 166/238 (69%), Positives = 193/238 (81%), Gaps = 8/238 (3%)
 Frame = -3

Query: 949 HSSDYAPYPKLNSEDTTPPIFGSDPNKPGPVSES--------NNPYITASPAPSSSVKIT 794
           HS DYAPYPKL+  D  PP    +     P+SE         +NPY+T +P  +SS K T
Sbjct: 30  HSGDYAPYPKLDPTDVAPPQQPLNTESRAPISEDAATTMPKDSNPYVTPAPVTASSTKTT 89

Query: 793 VDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAPSVTDAAMGRIAQSTKVLAEGGYD 614
           +DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT PS  DAA+GRIAQ TKVLAEGGY+
Sbjct: 90  LDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYE 149

Query: 613 KIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLSTAKLAFSSDSPLSYKEGDKTEWS 434
           KIF+QTFETVPEEQLLK+YACYLSTSAGPVMG+LYLSTAKLAF SD+PLSY+ GD+T+WS
Sbjct: 150 KIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQVGDQTQWS 209

Query: 433 YYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHEFWYMGFVNYDNAVNSLQEALQ 260
           YYKVVIPLHQ +A+N S SK N +EKYIQIISVDNHEFW+MGFV+YD+AV ++Q ALQ
Sbjct: 210 YYKVVIPLHQLRAVNASTSKTNQSEKYIQIISVDNHEFWFMGFVHYDSAVKNIQGALQ 267


>ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  344 bits (883), Expect = 2e-92
 Identities = 177/261 (67%), Positives = 198/261 (75%), Gaps = 32/261 (12%)
 Frame = -3

Query: 946 SSDYAPYPKLNSEDTTPP--------IFGSDP-----NKPGPVSES-------------- 848
           S+DYAPYPKL+  D  PP        I    P     N   P+SES              
Sbjct: 21  SADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPAPIARNSAT 80

Query: 847 -----NNPYITASPAPSSSVKITVDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAP 683
                +NPYI++SPAP+SS+K  +DSVKD LG+WGKK  EATKKA DLAGN+WQHLK  P
Sbjct: 81  TMPVESNPYISSSPAPASSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGP 140

Query: 682 SVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLS 503
           S  DAA+GRIAQ TKVLAEGGY+KIFQQTFETVPEEQL KSYACYLSTSAGPVMGILYLS
Sbjct: 141 SFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLS 200

Query: 502 TAKLAFSSDSPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHE 323
           T KLAF SDSPLSYK G++TEWSYYKVVIPLHQ KA+NTS SK NPAEKY+QIISVDNHE
Sbjct: 201 TEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHE 260

Query: 322 FWYMGFVNYDNAVNSLQEALQ 260
           FW+MGFV+YD+AV +LQ ALQ
Sbjct: 261 FWFMGFVHYDSAVKNLQGALQ 281


>ref|XP_003602953.1| GLABRA2 expression modulator [Medicago truncatula]
           gi|355492001|gb|AES73204.1| GLABRA2 expression modulator
           [Medicago truncatula]
          Length = 258

 Score =  338 bits (867), Expect = 1e-90
 Identities = 167/246 (67%), Positives = 195/246 (79%), Gaps = 14/246 (5%)
 Frame = -3

Query: 949 HSSDYAPYPKLNSEDTTPPIFGSDPNKPGPVSESN-------------NPYITASPAPS- 812
           H+ DYAPYPKL+  D  PP        P PV+  +             NPY++ +P P+ 
Sbjct: 21  HTPDYAPYPKLDPNDVAPP--------PPPVATESRATDAATTMPAESNPYVSPAPVPAP 72

Query: 811 SSVKITVDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAPSVTDAAMGRIAQSTKVL 632
           +S K T+DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT PS  DAA+GRIAQ TKVL
Sbjct: 73  TSAKNTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVL 132

Query: 631 AEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLSTAKLAFSSDSPLSYKEG 452
           AEGGY+KIF+QTFETVPEEQLLK+YACYLSTSAGPVMG+LYLSTAKLAF SD+PLSY+ G
Sbjct: 133 AEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTG 192

Query: 451 DKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHEFWYMGFVNYDNAVNSLQ 272
           D+T+WSYYKVVIPLHQ +A+N S SKANP EK+IQIISVDNHEFW+MGFV YD+AV  +Q
Sbjct: 193 DQTQWSYYKVVIPLHQLRAVNPSTSKANPTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQ 252

Query: 271 EALQTR 254
           EALQ+R
Sbjct: 253 EALQSR 258


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