BLASTX nr result

ID: Coptis24_contig00007041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007041
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   101   4e-19
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-18
gb|AAS55772.2| hypothetical protein [Oryza sativa Japonica Group]      87   1e-14

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  101 bits (251), Expect = 4e-19
 Identities = 82/273 (30%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
 Frame = -3

Query: 1101 IIANGDDTFIWHDLWCTETPLLWDNNARQMLQLG--EEAKVSELISNGRWNDIVLSLPEC 928
            II +G  T +W D W   +PL      R +   G  + AKV+ LI N  W          
Sbjct: 1107 IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 1166

Query: 927  DLKTKILRTDIYDLMN-KDQVVWSLTHSGKFSARSAYIAXXXXXXXXXXXXXXWGKLVIP 751
                + + ++    M  KD++VW  + + +F  + A+                W K  +P
Sbjct: 1167 HPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVP 1226

Query: 750  KHSFCTWQLFSGSLSTQDRLVNKGIINHSKCILCGTAARENSKHLFFECSYTKRVWSGVK 571
            +HSF  W      L+TQD+L   GI   ++C LC     E+  HLFFECSYTK +W  V 
Sbjct: 1227 RHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLC-LRNNEDHNHLFFECSYTKAIWWDVC 1285

Query: 570  AKIGMGFRVADSNNEWHSILQTS-RNSSMEGDIRGAYICATVSAIWAERNTRIFQKKYRP 394
             +  +  R+    +EW      S    S     R     ATV  +W ERN RIF    R 
Sbjct: 1286 DRCDIP-RMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIFAGMSRT 1344

Query: 393  PHLVMVR---ILEDMKLYIQRVVKDIPDSTSVR 304
            P+LV+ +   I+ D KL + R V    ++T ++
Sbjct: 1345 PNLVLNQIECIIRD-KLDLMRNVVPTNENTRIQ 1376


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 82/273 (30%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
 Frame = -3

Query: 1101 IIANGDDTFIWHDLWCTETPLLWDNNARQMLQLG--EEAKVSELISNGRWNDIVLSLPEC 928
            II +G  T +W D W   +PL      R +   G  + AKV+ LI N  W          
Sbjct: 234  IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 293

Query: 927  DLKTKILRTDIYDLMN-KDQVVWSLTHSGKFSARSAYIAXXXXXXXXXXXXXXWGKLVIP 751
                + + ++    M  KD++VW  + + +FS + A+                W K  +P
Sbjct: 294  HPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVP 353

Query: 750  KHSFCTWQLFSGSLSTQDRLVNKGIINHSKCILCGTAARENSKHLFFECSYTKRVWSGVK 571
            +HSF  W      L+TQD+L   GI   ++C LC     E+  HLFFECSYTK +W  V 
Sbjct: 354  RHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLC-LRNNEDHNHLFFECSYTKAIWWDVC 412

Query: 570  AKIGMGFRVADSNNEWHSILQTS-RNSSMEGDIRGAYICATVSAIWAERNTRIFQKKYRP 394
             +  +  R+    +EW      S    S           ATV  +W ERN RIF    R 
Sbjct: 413  DRCDIP-RMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGMSRT 471

Query: 393  PHLVMVR---ILEDMKLYIQRVVKDIPDSTSVR 304
            P+LV+ +   I+ D KL + R V    ++T ++
Sbjct: 472  PNLVLNQIECIIRD-KLDLMRNVVPTNENTRIQ 503


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 76/248 (30%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
 Frame = -3

Query: 1101 IIANGDDTFIWHDLWCTETPLLWDNNARQMLQLG--EEAKVSELISNGRWNDIVLSLPEC 928
            II +G  T +W D W   +PL      R +   G  + AKV+ LI N  W          
Sbjct: 52   IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 111

Query: 927  DLKTKILRTDIYDLMN-KDQVVWSLTHSGKFSARSAYIAXXXXXXXXXXXXXXWGKLVIP 751
                + + ++    M  KD++VW  + + +FS + A+                W K  +P
Sbjct: 112  HPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVP 171

Query: 750  KHSFCTWQLFSGSLSTQDRLVNKGIINHSKCILCGTAARENSKHLFFECSYTKRVWSGVK 571
            +HSF  W +    L+TQD+L   GI   ++C LC     E+  HLFFECSYTK +W  V 
Sbjct: 172  RHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLC-LRNNEDHNHLFFECSYTKAIWWDVC 230

Query: 570  AKIGMGFRVADSNNEWHSILQTS-RNSSMEGDIRGAYICATVSAIWAERNTRIFQKKYRP 394
             +  +  R+    +EW      S    S     R     ATV  +W ERN RIF    R 
Sbjct: 231  DRCDIP-RMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIFAGLSRT 289

Query: 393  PHLVMVRI 370
             +LV  +I
Sbjct: 290  SNLVFNQI 297


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 75/248 (30%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
 Frame = -3

Query: 1101 IIANGDDTFIWHDLWCTETPLLWDNNARQMLQLG--EEAKVSELISNGRWNDIVLSLPEC 928
            II +G  T +W D W   +PL      R +   G  + AKV+ LI N  W          
Sbjct: 767  IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 826

Query: 927  DLKTKILRTDIYDLMN-KDQVVWSLTHSGKFSARSAYIAXXXXXXXXXXXXXXWGKLVIP 751
                + + ++    M  KD+++W  + + +FS + A+                W K  +P
Sbjct: 827  HPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVP 886

Query: 750  KHSFCTWQLFSGSLSTQDRLVNKGIINHSKCILCGTAARENSKHLFFECSYTKRVWSGVK 571
            +HSF  W +    L+TQD+L   GI   ++C LC     E+  HLFFECSYTK +W  V 
Sbjct: 887  RHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLC-LRNNEDHNHLFFECSYTKAIWWDVC 945

Query: 570  AKIGMGFRVADSNNEWHSILQTS-RNSSMEGDIRGAYICATVSAIWAERNTRIFQKKYRP 394
             +  +  R+    +EW      S    S     R     ATV  +W ERN RIF    R 
Sbjct: 946  DRCDIP-RMTKGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERNARIFAGLSRT 1004

Query: 393  PHLVMVRI 370
             +LV  +I
Sbjct: 1005 SNLVFNQI 1012


>gb|AAS55772.2| hypothetical protein [Oryza sativa Japonica Group]
          Length = 493

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 11/268 (4%)
 Frame = -3

Query: 1098 IANGDDTFIWHDLWCTETPL------LWDNNARQMLQLGEEAKVSELISNGRWNDIVLSL 937
            + NG+ +  WHD W   +PL      L+    R+   + +E + +  +   R  +    +
Sbjct: 228  LGNGNKSKFWHDRWLNGSPLKELYPSLYQLATRKNRSVAQEIQGNHWLKQMRRMNTTTQV 287

Query: 936  PECDLKT-KILRTDIYDLMNKDQVVWSLTHSGKFSARSAYIAXXXXXXXXXXXXXXWGKL 760
             E  L   +I + ++ + ++ D + W  T +G +SA SAY                W   
Sbjct: 288  REFILLWHQIQQVELQEGID-DAIAWRWTPNGSYSANSAYRIQFVGGIQDNRSDFFWKAK 346

Query: 759  VIPKHSFCTWQLFSGSLSTQDRLVNKGIINHSKCILCGTAARENSKHLFFECSYTKRVWS 580
            V  K  F  W +    + T D+L  +G  N   C LCG    E + HL  EC++ K+VW 
Sbjct: 347  VENKCKFFGWLMIHRKILTADKLQLRGWDNSHICPLCGVEP-ETATHLLMECAFAKQVWR 405

Query: 579  GVKAKIGMGFRVADSNN----EWHSILQTSRNSSMEGDIRGAYICATVSAIWAERNTRIF 412
             +  K G+   VA + +     W S  +         +  G +IC T   IW +RN RIF
Sbjct: 406  QIWLKAGLHMPVASTFDGDMLRWWSTCRREMAKEQRRNFDGLFIC-TAWGIWLQRNARIF 464

Query: 411  QKKYRPPHLVMVRILEDMKLYIQRVVKD 328
               Y     V+  I+   K Y+   V D
Sbjct: 465  NGTYSTVMQVVDSIIAMCKAYVGAHVLD 492


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