BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007038
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   270   7e-70
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              263   8e-68
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...   250   4e-64
ref|XP_002512603.1| conserved hypothetical protein [Ricinus comm...   249   9e-64

>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
            gi|222854693|gb|EEE92240.1| f-box family protein [Populus
            trichocarpa]
          Length = 292

 Score =  270 bits (689), Expect = 7e-70
 Identities = 143/290 (49%), Positives = 180/290 (62%), Gaps = 18/290 (6%)
 Frame = -1

Query: 1071 LPEGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTSVSNLNLN 892
            LPEGC+ N+                    SA +SD +WE+FLP +Y+ I+ TS S + L+
Sbjct: 6    LPEGCIANVLAFTGPRDACRLSIVSSLFKSAGESDAVWERFLPRDYQSIIFTSDSYVLLS 65

Query: 891  DFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWEWKSQ 712
              ++KKELY RLC+ PII++ G KSF L K+SGKKC+ML A++L I WGDTP YW W S 
Sbjct: 66   SLSSKKELYLRLCEKPIIIDDGKKSFSLVKKSGKKCYMLSARDLMIVWGDTPTYWRWNSD 125

Query: 711  PDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEGSVQF 532
              SRF EVA L  VCWL I GKI+  MLSP T YAAYLVFK  + +YGLD    E  V  
Sbjct: 126  SSSRFGEVAELIGVCWLEICGKINATMLSPATLYAAYLVFKPKEGAYGLDYQPVEVGVGL 185

Query: 531  VLEGGNASGYRTVHLDYDSNRAPHR---------RHRRSSV---------TQYVGQLPNA 406
            V   G+ +G R V+LD    RA HR          H RS +         ++  GQ P  
Sbjct: 186  V---GSENGKRNVYLDSQRGRA-HRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPKE 241

Query: 405  RGDGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPKE 256
            RGDGW+EIELGEF+   GEDGE++M ++EVK+GDWK GL VEG+E+RPKE
Sbjct: 242  RGDGWLEIELGEFFCKEGEDGELEMRVQEVKSGDWKGGLTVEGIEIRPKE 291


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  263 bits (671), Expect = 8e-68
 Identities = 136/275 (49%), Positives = 181/275 (65%), Gaps = 1/275 (0%)
 Frame = -1

Query: 1080 FYALPEGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTSVSNL 901
            F +LPEGC+ ++                    SAA+SD +WE+FLP++YREI++ S  + 
Sbjct: 20   FSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESS 79

Query: 900  NLNDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWEW 721
            +   F++KKELYF LCD+P++++ G KSF LEKRSGKKC+ML ++EL I WGDTP YWEW
Sbjct: 80   SWRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEW 139

Query: 720  KSQPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEGS 541
             S P+SRF EVA L++VCW  I+GKI+T MLSP TNYAAYLVF     S+G ++   E S
Sbjct: 140  TSLPESRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLVFH-AGRSHGFEDVPVESS 198

Query: 540  VQFVLEGGNASGYRTVHL-DYDSNRAPHRRHRRSSVTQYVGQLPNARGDGWMEIELGEFY 364
            ++ V   GN +  R ++L  Y  N  P      SS+   +   P  R D W EIELGEF+
Sbjct: 199  IEIV---GNETTTRVIYLARYRKNEEP-----TSSIRSDL-PYPKKREDSWFEIELGEFF 249

Query: 363  NDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPK 259
             + GED E+++TL EVK G WK GLIVEG+E+RPK
Sbjct: 250  IEGGEDTELEITLMEVKAGHWKDGLIVEGIEIRPK 284


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  258 bits (658), Expect = 3e-66
 Identities = 138/301 (45%), Positives = 178/301 (59%), Gaps = 18/301 (5%)
 Frame = -1

Query: 1104 SRKMQEADFYALPEGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREI 925
            S + ++     LPE C+ N+                    +A +SD +WE+FLP +Y+ I
Sbjct: 5    SSREEDMSLDVLPEACIANVLSFTCPRDACRLSMVCSLFKAAEESDFVWERFLPRDYQSI 64

Query: 924  VSTS-VSNLNLNDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAW 748
            +S S  S++ L   ++KK LY  LC+ P+I+EGG KS  LEK+SGKKC+ML A++L I W
Sbjct: 65   ISKSDASSMLLASASSKKHLYLMLCEKPLIIEGGKKSISLEKKSGKKCYMLSARDLIIVW 124

Query: 747  GDTPQYWEWKSQPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYG 568
            GDTP YW+W S P SRF EVA L SVCWL I+GKI+  MLSP T Y AYLVF+ T   YG
Sbjct: 125  GDTPTYWKWNSDPSSRFGEVAELISVCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYG 184

Query: 567  LDNPTTEGSVQFVLEGGNASGYRTVHLDYDSNRAP--HRRHRR---------------SS 439
            LD    E  V  V   G+  G R V+LD +  R    H   RR                 
Sbjct: 185  LDYQPVEVGVGLV---GSECGMRNVYLDSERGRRQQYHFVSRRIGLFNRCRIVGMPASEP 241

Query: 438  VTQYVGQLPNARGDGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPK 259
              +  GQ P  R DGW+EIELGEF+   GED E++M+++EVK GDWK GLIVEG+E+RPK
Sbjct: 242  ARENNGQYPKKREDGWLEIELGEFFCKEGEDRELEMSVQEVKGGDWKGGLIVEGIEIRPK 301

Query: 258  E 256
            E
Sbjct: 302  E 302


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
            gi|223546849|gb|EEF48346.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 301

 Score =  250 bits (639), Expect = 4e-64
 Identities = 130/293 (44%), Positives = 172/293 (58%), Gaps = 21/293 (7%)
 Frame = -1

Query: 1074 ALPEGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTSVSNLNL 895
            +LPEGC+ ++                     AA+SD +WEKFLP +Y  I+S S  +  L
Sbjct: 14   SLPEGCIADVVSFTGPFDACRLSTVSSTFRDAANSDTVWEKFLPQDYHSIISRSSDSFLL 73

Query: 894  NDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWEWKS 715
            + F++KK+LYF LCD+PI+++ G KSF LEK SGKKC+ML A++L I W DTP YW W  
Sbjct: 74   DRFSSKKQLYFSLCDNPILIDDGKKSFALEKWSGKKCYMLSARDLKIVWSDTPTYWRWIC 133

Query: 714  QPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEGSVQ 535
             PDSRF EVA L SVCWL I  +I+  MLSP+T Y AY VFK T  +YG +    E  V 
Sbjct: 134  LPDSRFPEVAELISVCWLEISARINISMLSPSTLYTAYFVFKSTTGAYGFEYQPAEAVVG 193

Query: 534  FVLEGGNASGYRTVHLDYDSNRAPHRRHRRSSVTQYVGQL-------------------- 415
             V   G+ +    V+LD +      RR R   V + +G L                    
Sbjct: 194  LV---GSETCKHNVYLDAERG----RRRRSQIVRRRIGLLNRGRIFGLQASLRNGESDCK 246

Query: 414  -PNARGDGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPK 259
             P  RGDGW+EIELGEF+  +GEDGE+++++ EVK G WK GL V+G+E+RPK
Sbjct: 247  YPKERGDGWLEIELGEFFKKKGEDGELELSVLEVKGGHWKGGLAVQGIEIRPK 299


>ref|XP_002512603.1| conserved hypothetical protein [Ricinus communis]
            gi|223548564|gb|EEF50055.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 315

 Score =  249 bits (636), Expect = 9e-64
 Identities = 130/293 (44%), Positives = 173/293 (59%), Gaps = 18/293 (6%)
 Frame = -1

Query: 1083 DFYALPEGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTSVSN 904
            D Y LPEGCV N+                    SA++SD +WE FLP++Y  I+S+S S+
Sbjct: 13   DLYELPEGCVANVLSFTGPADVGRLSMVSFTFKSASESDAVWESFLPNDYHSIISSSSSS 72

Query: 903  LNLNDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWE 724
              L+  ++KK+LY RLCD PI+++ G KSF L+K SGKKC+ML A++L I WGDTP+YW 
Sbjct: 73   FLLSSSSSKKDLYLRLCDSPILIDDGKKSFSLDKLSGKKCYMLSARDLMIVWGDTPRYWR 132

Query: 723  WKSQPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEG 544
            W S+  SRF EVA L  VCWL I GKI  +MLSP T YAAY V+K T  +YG D+   E 
Sbjct: 133  WTSELKSRFEEVAELIGVCWLEICGKISARMLSPETLYAAYFVYKTTAGAYGFDHQPVEV 192

Query: 543  SVQFVLEGGNASGYRTVHLDYDSNRAPHRR----------HRRSSVTQYV--------GQ 418
            +V      G     R+V+LD +  R    +          H R+   Q          G 
Sbjct: 193  TVGL---AGTEGCKRSVYLDAERERQQRYQIVIRRIGLFSHSRALGLQAPVPTRENNDGM 249

Query: 417  LPNARGDGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPK 259
             P  R DGW+EIELG F+N   +DG+++M + EV  GDWK GLIV+G+++RPK
Sbjct: 250  HPQEREDGWLEIELGTFFNKEDDDGDLEMKVLEVNGGDWKGGLIVQGIDIRPK 302