BLASTX nr result

ID: Coptis24_contig00007037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007037
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145759.1| PREDICTED: alpha-L-fucosidase 1-like [Cucumi...   562   e-166
ref|XP_004160066.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-fuco...   561   e-165
ref|XP_002313533.1| predicted protein [Populus trichocarpa] gi|2...   544   e-161
ref|XP_002523703.1| alpha-l-fucosidase, putative [Ricinus commun...   526   e-155
ref|NP_180377.2| alpha-L-fucosidase 1 [Arabidopsis thaliana] gi|...   525   e-153

>ref|XP_004145759.1| PREDICTED: alpha-L-fucosidase 1-like [Cucumis sativus]
          Length = 534

 Score =  562 bits (1449), Expect(2) = e-166
 Identities = 257/303 (84%), Positives = 278/303 (91%)
 Frame = -2

Query: 1100 ASQLSWQLGNMALFLHFGTNTFTNSEWGTGHVDPSVFNPTKLDAHQWVQVAKQAGFSRVI 921
            ASQ+ WQLGNMALFLHFG NTFT+SEWGTGHV PSVFNP  LDA QWV+VAK AGFSR+I
Sbjct: 63   ASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVHPSVFNPINLDAAQWVRVAKDAGFSRII 122

Query: 920  LTAKHHDGFCLWPSLYTDYSVKSSPWKNGTGDIVAELASAARKAGIGLGLYLSPWDRHET 741
            LTAKHHDGFCLWPS YT+YSV SSPW+NG GD+V ELA AA++AG+GLGLYLSPWDRHE+
Sbjct: 123  LTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRHES 182

Query: 740  CYGKTLEYNEFYMGQMTELLTRYGDIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA 561
            CYGKTLEYNEFY+GQMTELLTRYG+IKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA
Sbjct: 183  CYGKTLEYNEFYLGQMTELLTRYGEIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA 242

Query: 560  VIFSDGGPDTRWAGDETGFAGSTCWSLFNSSSSLIGHTDSKYSGEGDPHGHDWVPAECDV 381
            VIFSD GPD RW GDE G A  TCWSLFNSSS+ IG TDS+YSGEGDP+GHDW+PAECDV
Sbjct: 243  VIFSDAGPDCRWIGDEAGVAKPTCWSLFNSSSAKIGGTDSRYSGEGDPYGHDWIPAECDV 302

Query: 380  SIRPGWFWHASELPKSAIILLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFTKL 201
            SIRPGWFWH SE+PKSA  LLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFT +
Sbjct: 303  SIRPGWFWHPSEVPKSARTLLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFTMI 362

Query: 200  RET 192
            R++
Sbjct: 363  RDS 365



 Score = 51.6 bits (122), Expect(2) = e-166
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = -1

Query: 132 FTKLRETIFSTNLARNAVVTASSTRGGITNSWFAPSNVLEKGIY 1
           FT +R++IFS NLA NA+V  SSTRG   +  F P+NVL++GIY
Sbjct: 359 FTMIRDSIFSYNLAENALVDGSSTRGDDEDVRFTPANVLKEGIY 402


>ref|XP_004160066.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-fucosidase 1-like [Cucumis
            sativus]
          Length = 534

 Score =  561 bits (1446), Expect(2) = e-165
 Identities = 256/303 (84%), Positives = 278/303 (91%)
 Frame = -2

Query: 1100 ASQLSWQLGNMALFLHFGTNTFTNSEWGTGHVDPSVFNPTKLDAHQWVQVAKQAGFSRVI 921
            ASQ+ WQLGNMALFLHFG NTFT+SEWGTGHV PSVFNP  LDA QWV+VAK AGFSR+I
Sbjct: 63   ASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVHPSVFNPINLDAAQWVRVAKDAGFSRII 122

Query: 920  LTAKHHDGFCLWPSLYTDYSVKSSPWKNGTGDIVAELASAARKAGIGLGLYLSPWDRHET 741
            LTAKHHDGFCLWPS YT+YSV SSPW+NG GD++ ELA AA++AG+GLGLYLSPWDRHE+
Sbjct: 123  LTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVLGELAKAAKEAGLGLGLYLSPWDRHES 182

Query: 740  CYGKTLEYNEFYMGQMTELLTRYGDIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA 561
            CYGKTLEYNEFY+GQMTELLTRYG+IKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA
Sbjct: 183  CYGKTLEYNEFYLGQMTELLTRYGEIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA 242

Query: 560  VIFSDGGPDTRWAGDETGFAGSTCWSLFNSSSSLIGHTDSKYSGEGDPHGHDWVPAECDV 381
            VIFSD GPD RW GDE G A  TCWSLFNSSS+ IG TDS+YSGEGDP+GHDW+PAECDV
Sbjct: 243  VIFSDAGPDCRWIGDEAGVAKPTCWSLFNSSSAKIGGTDSRYSGEGDPYGHDWIPAECDV 302

Query: 380  SIRPGWFWHASELPKSAIILLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFTKL 201
            SIRPGWFWH SE+PKSA  LLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFT +
Sbjct: 303  SIRPGWFWHPSEVPKSARTLLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFTMI 362

Query: 200  RET 192
            R++
Sbjct: 363  RDS 365



 Score = 48.9 bits (115), Expect(2) = e-165
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = -1

Query: 132 FTKLRETIFSTNLARNAVVTASSTRGGITNSWFAPSNVLEKGI 4
           FT +R++IFS NLA NA+V  SSTRG   +  F P+NVL++GI
Sbjct: 359 FTMIRDSIFSYNLAENALVDGSSTRGDDEDVRFTPANVLKEGI 401


>ref|XP_002313533.1| predicted protein [Populus trichocarpa] gi|222849941|gb|EEE87488.1|
            predicted protein [Populus trichocarpa]
          Length = 457

 Score =  544 bits (1402), Expect(2) = e-161
 Identities = 249/303 (82%), Positives = 274/303 (90%)
 Frame = -2

Query: 1100 ASQLSWQLGNMALFLHFGTNTFTNSEWGTGHVDPSVFNPTKLDAHQWVQVAKQAGFSRVI 921
            ASQ  WQL +MALF HFGTNTFT+SEWGTG VDPSVFNPT+L+  QWVQVAK +GF+RVI
Sbjct: 16   ASQFQWQLSSMALFFHFGTNTFTDSEWGTGQVDPSVFNPTRLNTTQWVQVAKDSGFNRVI 75

Query: 920  LTAKHHDGFCLWPSLYTDYSVKSSPWKNGTGDIVAELASAARKAGIGLGLYLSPWDRHET 741
            LTAKHHDGFCLWPS YTDYSVKS+ W+NG+GD+V EL+ AA++AG+ LGLYLSPWDRHE 
Sbjct: 76   LTAKHHDGFCLWPSEYTDYSVKSTSWRNGSGDVVKELSLAAKEAGVDLGLYLSPWDRHEG 135

Query: 740  CYGKTLEYNEFYMGQMTELLTRYGDIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA 561
            CYGKTLEYNEFY+GQMTELLTRYG+IKEVWLDGAKGEGEKDMEYFFDSWFSLIHQ QPGA
Sbjct: 136  CYGKTLEYNEFYLGQMTELLTRYGEIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQHQPGA 195

Query: 560  VIFSDGGPDTRWAGDETGFAGSTCWSLFNSSSSLIGHTDSKYSGEGDPHGHDWVPAECDV 381
            +IFSD GPDTRW GDE G AGSTCWSLFN SS+ IG+TD  YS  GDP GHDWVPAECDV
Sbjct: 196  IIFSDAGPDTRWIGDEAGVAGSTCWSLFNRSSAQIGNTDPIYSQGGDPSGHDWVPAECDV 255

Query: 380  SIRPGWFWHASELPKSAIILLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFTKL 201
            SIRPGWFWHASE+PKSAI LLDIYYKS GRNCLLLLNVPPNSSGLISDED+QVL+EF++L
Sbjct: 256  SIRPGWFWHASEVPKSAIKLLDIYYKSVGRNCLLLLNVPPNSSGLISDEDIQVLKEFSEL 315

Query: 200  RET 192
            R +
Sbjct: 316  RRS 318



 Score = 53.1 bits (126), Expect(2) = e-161
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = -1

Query: 132 FTKLRETIFSTNLARNAVVTASSTRGGITNSWFAPSNVLEKGIY 1
           F++LR +IFS NLA NA++ ASSTRG I +S F P N+ ++GIY
Sbjct: 312 FSELRRSIFSDNLAGNAILNASSTRGSIGDSRFDPYNIFKEGIY 355


>ref|XP_002523703.1| alpha-l-fucosidase, putative [Ricinus communis]
            gi|223537007|gb|EEF38643.1| alpha-l-fucosidase, putative
            [Ricinus communis]
          Length = 562

 Score =  526 bits (1356), Expect(2) = e-155
 Identities = 243/303 (80%), Positives = 265/303 (87%)
 Frame = -2

Query: 1100 ASQLSWQLGNMALFLHFGTNTFTNSEWGTGHVDPSVFNPTKLDAHQWVQVAKQAGFSRVI 921
            A QL WQL +MALFLHFGTNTFT+SEWG+G  DPS+FNPT+ +A QWVQVAK +GFSR+I
Sbjct: 65   APQLQWQLTSMALFLHFGTNTFTDSEWGSGRADPSIFNPTQFNAAQWVQVAKDSGFSRLI 124

Query: 920  LTAKHHDGFCLWPSLYTDYSVKSSPWKNGTGDIVAELASAARKAGIGLGLYLSPWDRHET 741
            LTAKHHDGFCLWPS YTDYSVKSS W+NGTGD+V ELA AA++AGI LG YLSPWDRHE 
Sbjct: 125  LTAKHHDGFCLWPSNYTDYSVKSSSWRNGTGDVVKELALAAKEAGIDLGFYLSPWDRHEA 184

Query: 740  CYGKTLEYNEFYMGQMTELLTRYGDIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA 561
             YGK+LEYNE+YMGQMTELLTRYG+IKEVWLDGAKGEGEKDMEYFFD WF LI QLQPGA
Sbjct: 185  SYGKSLEYNEYYMGQMTELLTRYGEIKEVWLDGAKGEGEKDMEYFFDRWFGLIRQLQPGA 244

Query: 560  VIFSDGGPDTRWAGDETGFAGSTCWSLFNSSSSLIGHTDSKYSGEGDPHGHDWVPAECDV 381
            VIFSD GPDTRW GDE G AGSTCWSLFN S+  IG  D KYS  GDP GHDWVPAECDV
Sbjct: 245  VIFSDAGPDTRWIGDENGAAGSTCWSLFNRSAVKIGGADPKYSQRGDPSGHDWVPAECDV 304

Query: 380  SIRPGWFWHASELPKSAIILLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFTKL 201
            SIRPGWFWHASE PKSA+ LL+IYY SAGRNCLLLLNVPPN+SGLIS ED+QVLQEF +L
Sbjct: 305  SIRPGWFWHASETPKSAMKLLEIYYNSAGRNCLLLLNVPPNASGLISAEDIQVLQEFAQL 364

Query: 200  RET 192
            R +
Sbjct: 365  RRS 367



 Score = 51.6 bits (122), Expect(2) = e-155
 Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
 Frame = -1

Query: 132 FTKLRETIFSTNLARN--AVVTASSTRGGITNSWFAPSNVLEKGIY 1
           F +LR +IFS N+A+N  A+++ASSTRGG  NS F P NVL++GIY
Sbjct: 361 FAQLRRSIFSYNIAKNKIALLSASSTRGGNGNSQFDPYNVLKEGIY 406


>ref|NP_180377.2| alpha-L-fucosidase 1 [Arabidopsis thaliana]
            gi|332278183|sp|Q8GW72.2|FUCO1_ARATH RecName:
            Full=Alpha-L-fucosidase 1; AltName:
            Full=Alpha-1,3/4-fucosidase; Short=AtFUC1; AltName:
            Full=Alpha-L-fucoside fucohydrolase; Flags: Precursor
            gi|330252985|gb|AEC08079.1| alpha-L-fucosidase 1
            [Arabidopsis thaliana]
          Length = 506

 Score =  525 bits (1351), Expect(2) = e-153
 Identities = 235/303 (77%), Positives = 269/303 (88%)
 Frame = -2

Query: 1100 ASQLSWQLGNMALFLHFGTNTFTNSEWGTGHVDPSVFNPTKLDAHQWVQVAKQAGFSRVI 921
            + QL WQLG+MA+FLHFG NTFT+SEWGTG  +PS+FNPT L+A QWVQ+AK +GFSRVI
Sbjct: 40   SQQLQWQLGSMAMFLHFGPNTFTDSEWGTGKANPSIFNPTHLNASQWVQIAKDSGFSRVI 99

Query: 920  LTAKHHDGFCLWPSLYTDYSVKSSPWKNGTGDIVAELASAARKAGIGLGLYLSPWDRHET 741
            LTAKHHDGFCLWPS YTDYSVKSS W+NG GD+VAELASAA++AGIGLGLYLSPWDRHE 
Sbjct: 100  LTAKHHDGFCLWPSEYTDYSVKSSQWRNGAGDVVAELASAAKEAGIGLGLYLSPWDRHEQ 159

Query: 740  CYGKTLEYNEFYMGQMTELLTRYGDIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQLQPGA 561
            CYGKTLEYNEFY+ QMTELLT+YG+IKEVWLDGAKG+GEKDMEYFFD+WFSLIHQLQP A
Sbjct: 160  CYGKTLEYNEFYLSQMTELLTKYGEIKEVWLDGAKGDGEKDMEYFFDTWFSLIHQLQPKA 219

Query: 560  VIFSDGGPDTRWAGDETGFAGSTCWSLFNSSSSLIGHTDSKYSGEGDPHGHDWVPAECDV 381
            VIFSD GPD RW GDE G AGSTCWSLFN +++ IG T+  YS EGD +G DWVPAECDV
Sbjct: 220  VIFSDAGPDVRWIGDEAGLAGSTCWSLFNRTNAKIGDTEPSYSQEGDGYGQDWVPAECDV 279

Query: 380  SIRPGWFWHASELPKSAIILLDIYYKSAGRNCLLLLNVPPNSSGLISDEDVQVLQEFTKL 201
            SIRPGWFWHASE PK A+ LLDIYY S GRNCL LLNVPPNSSGLIS++D++VL+EF+++
Sbjct: 280  SIRPGWFWHASESPKPAVQLLDIYYNSVGRNCLFLLNVPPNSSGLISEQDIKVLEEFSEM 339

Query: 200  RET 192
            + +
Sbjct: 340  KNS 342



 Score = 43.9 bits (102), Expect(2) = e-153
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -1

Query: 132 FTKLRETIFSTNLARNAVVTASSTRGGITNSWFAPSNVLEKGI 4
           F++++ +IFS NLAR A V +SS RG   +S F P NVLE+G+
Sbjct: 336 FSEMKNSIFSNNLARKAFVNSSSIRGD-QSSQFGPKNVLEEGL 377


Top