BLASTX nr result
ID: Coptis24_contig00007036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007036 (1487 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera... 367 4e-99 ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi... 363 5e-98 ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max] 355 2e-95 ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|2... 353 5e-95 ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin... 352 2e-94 >ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera] gi|297743215|emb|CBI36082.3| unnamed protein product [Vitis vinifera] Length = 317 Score = 367 bits (942), Expect = 4e-99 Identities = 198/315 (62%), Positives = 229/315 (72%), Gaps = 16/315 (5%) Frame = -1 Query: 1316 FFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LVD 1143 FFQDLA+P+S+ RGKFTS GQAAAVSALW +NF G+D PPPP++TLEDR DFSPE ++D Sbjct: 17 FFQDLASPVSSRRGKFTSSGQAAAVSALWHDNFAGSDLPPPPMYTLEDRSDFSPESGILD 76 Query: 1142 YP-------DFKTPV------LATPLKSRFDAXXXXXXXXSGGPNVKESAGWWGSGNGNE 1002 YP D +TPV TP+K + +A S WW Sbjct: 77 YPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTS-----------SASLSWWSPAKSGG 125 Query: 1001 STEERGGKGSPVNGVVNSASLITLPPVREVVRPDVQRSSFPVGDLDEEEWVTVYGFSPGD 822 EE+G KGSPV GVV +LITLPP REV RP++QR+ P G+LDEEEWVTVYGFSPGD Sbjct: 126 DQEEKG-KGSPVEGVVQPGALITLPPPREVARPEMQRNCLPAGNLDEEEWVTVYGFSPGD 184 Query: 821 TNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVGVKLLD 642 TNLVLREFEKCG ILKHVPGPR ANW+HILYQ+R DA KALSK+GMQINGVLIVGVK LD Sbjct: 185 TNLVLREFEKCGVILKHVPGPRDANWIHILYQNRSDAQKALSKNGMQINGVLIVGVKPLD 244 Query: 641 PFQRQALSEAPNGNQGFMTL-PPASSRTTELIPSKLSPRPYHLXXXXXXXQHSAGVIASP 465 P QRQAL+E N NQGFMTL PPASSR+ E P ++SPRPY+L + S+G IASP Sbjct: 245 PMQRQALNERLN-NQGFMTLPPPASSRSLESNPLRVSPRPYYL-QNGSNARQSSGAIASP 302 Query: 464 AKSVVSKIVDLMFGI 420 AKSVVSKI+DLMFG+ Sbjct: 303 AKSVVSKIMDLMFGV 317 >ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis] gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative [Ricinus communis] Length = 332 Score = 363 bits (933), Expect = 5e-98 Identities = 197/317 (62%), Positives = 227/317 (71%), Gaps = 18/317 (5%) Frame = -1 Query: 1316 FFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LVD 1143 F+QDLA+P+S +GKF +PGQAAAVSALWRENFGG+D PPPP++TLEDR DFSPE + D Sbjct: 18 FYQDLASPVSARKGKFATPGQAAAVSALWRENFGGSDLPPPPMYTLEDRSDFSPESGIPD 77 Query: 1142 YP-------DFKTP------VLATPLKSRFDAXXXXXXXXSGGPNVKESAG--WWGSGNG 1008 YP D ++P P KS+ DA G N + SA WW Sbjct: 78 YPVSPEVKSDPRSPRQISGREFMIPSKSKSDASTSFALMN-GHQNQQGSASSTWWSPAKA 136 Query: 1007 NESTEERGGKGSPVNGVVNSASLITLPPVREVVRPDVQRSSFPVGDLDEEEWVTVYGFSP 828 + S +E GKGSPV GVV +LI LPP+REV RP++QR++ P G DEEEWVTVYGFSP Sbjct: 137 SSSEQEDKGKGSPVEGVVQPGALIILPPLREVARPEMQRNNLPTGKFDEEEWVTVYGFSP 196 Query: 827 GDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVGVKL 648 GDTNLVLREFEKCG ILKHVPGPR ANWMHILYQSR DA KALSK+GMQINGVLIVGVK Sbjct: 197 GDTNLVLREFEKCGVILKHVPGPRDANWMHILYQSRSDAQKALSKNGMQINGVLIVGVKP 256 Query: 647 LDPFQRQALSEAPNGNQGFMTL-PPASSRTTELIPSKLSPRPYHLXXXXXXXQHSAGVIA 471 +DP QRQAL+E N NQGFMTL PP+SSR++EL S RPYH+ + S G IA Sbjct: 257 VDPMQRQALNERLN-NQGFMTLPPPSSSRSSELKTLGASSRPYHIQNGSSSARQSGGSIA 315 Query: 470 SPAKSVVSKIVDLMFGI 420 SPAKSVVSKI D+MFGI Sbjct: 316 SPAKSVVSKIFDVMFGI 332 >ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max] Length = 331 Score = 355 bits (910), Expect = 2e-95 Identities = 191/317 (60%), Positives = 226/317 (71%), Gaps = 18/317 (5%) Frame = -1 Query: 1316 FFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LVD 1143 FFQDLA+P+S RGKF+SPGQAAAVS+LWRENFG +D PPPPVFTLEDR DFSPE ++D Sbjct: 17 FFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVFTLEDRSDFSPESGILD 76 Query: 1142 YP-------DFKTPV------LATPLKSRFDAXXXXXXXXSGGPNVKESAG--WWGSGNG 1008 Y D +TP+ +TPLKS+ +A N + S G WW Sbjct: 77 YQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGVQ-QNQQGSPGLSWWSPTTA 135 Query: 1007 NESTEE-RGGKGSPVNGVVNSASLITLPPVREVVRPDVQRSSFPVGDLDEEEWVTVYGFS 831 E+ G+ SPV GVV +LITLPP EV RP+VQR+S P G+L+EEEWVTVYGFS Sbjct: 136 KSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFS 195 Query: 830 PGDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVGVK 651 PGDTN+VLREFEKCG ILKHVPGPR ANW+HILYQ+R DAHKAL+K+GMQINGVLIVGVK Sbjct: 196 PGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAHKALNKNGMQINGVLIVGVK 255 Query: 650 LLDPFQRQALSEAPNGNQGFMTLPPASSRTTELIPSKLSPRPYHLXXXXXXXQHSAGVIA 471 LLDP QRQAL+E NQGFM LP AS+R +E+ K RPY+L + + G IA Sbjct: 256 LLDPMQRQALNERLK-NQGFMPLPLASARNSEVSTLKAPSRPYYLQNGNSTARQTGGTIA 314 Query: 470 SPAKSVVSKIVDLMFGI 420 SP KS+VSKI+DLMFG+ Sbjct: 315 SPTKSLVSKIMDLMFGV 331 >ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|222846990|gb|EEE84537.1| predicted protein [Populus trichocarpa] Length = 329 Score = 353 bits (907), Expect = 5e-95 Identities = 188/317 (59%), Positives = 222/317 (70%), Gaps = 18/317 (5%) Frame = -1 Query: 1316 FFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LVD 1143 FFQDLA+P+S +GKF++P QAAAVSALWR+NFGG+D PPPP +TLEDR + SPE + D Sbjct: 14 FFQDLASPVSAGKGKFSTPAQAAAVSALWRDNFGGSDLPPPPFYTLEDRSEISPESGIPD 73 Query: 1142 YP---DFKTPVLATPLKS---------RFDAXXXXXXXXSGGPNVKESAG---WWGSGNG 1008 YP D K+ +P +S + + G N ++ + WW Sbjct: 74 YPLSPDIKSHPTTSPFQSSGREFGTPPKTKSEATTSFALISGQNTQQGSPISTWWSPSKA 133 Query: 1007 NESTEERGGKGSPVNGVVNSASLITLPPVREVVRPDVQRSSFPVGDLDEEEWVTVYGFSP 828 S E GKGSPV GVV +LITLPP REV RP+ R+ P G+LDEEEWVTVYGF+P Sbjct: 134 RSSEHEDKGKGSPVEGVVQPGALITLPPPREVARPEKHRNCVPAGNLDEEEWVTVYGFAP 193 Query: 827 GDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVGVKL 648 GDTNLVLREFEKCG ILKHVPGPR ANWMHILYQSR DA KALSK+GMQINGVLI+GVKL Sbjct: 194 GDTNLVLREFEKCGVILKHVPGPREANWMHILYQSRADAQKALSKNGMQINGVLIIGVKL 253 Query: 647 LDPFQRQALSEAPNGNQGFMTLPPASS-RTTELIPSKLSPRPYHLXXXXXXXQHSAGVIA 471 +DP QRQAL+E N NQGFMTLPP SS RT + + SPRP++L + S GVIA Sbjct: 254 VDPMQRQALNERIN-NQGFMTLPPPSSTRTPDSNALRASPRPHYLQNGSTSARQSGGVIA 312 Query: 470 SPAKSVVSKIVDLMFGI 420 SPAKS+VSKI D+MFGI Sbjct: 313 SPAKSMVSKIFDVMFGI 329 >ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max] gi|255639315|gb|ACU19955.1| unknown [Glycine max] Length = 331 Score = 352 bits (902), Expect = 2e-94 Identities = 189/317 (59%), Positives = 224/317 (70%), Gaps = 18/317 (5%) Frame = -1 Query: 1316 FFQDLATPISTHRGKFTSPGQAAAVSALWRENFGGTDPPPPPVFTLEDRVDFSPE--LVD 1143 FFQDLA+P+S RGKF+SP QAAAVS+LWRENFG +D PPPPVFTLEDR DFSPE ++D Sbjct: 17 FFQDLASPVSARRGKFSSPSQAAAVSSLWRENFGSSDLPPPPVFTLEDRSDFSPESGILD 76 Query: 1142 YP-------DFKTPV------LATPLKSRFDAXXXXXXXXSGGPNVKESAG--WWGSGNG 1008 Y D +TP+ +TP+KS+ +A N + S G WW Sbjct: 77 YQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYALRGVQ-QNQQGSPGLSWWSPTTA 135 Query: 1007 NESTEE-RGGKGSPVNGVVNSASLITLPPVREVVRPDVQRSSFPVGDLDEEEWVTVYGFS 831 E+ G+ SPV GVV +LITLPP EV RP+VQR+S P G+L+EEEWVTVYGFS Sbjct: 136 KSGGEQDERGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPAGNLNEEEWVTVYGFS 195 Query: 830 PGDTNLVLREFEKCGTILKHVPGPRTANWMHILYQSRFDAHKALSKSGMQINGVLIVGVK 651 PGDTN+VLREFEKCG ILKHVPGPR ANWMHILYQ+R DAHKAL+K+GMQINGVLIVGVK Sbjct: 196 PGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGMQINGVLIVGVK 255 Query: 650 LLDPFQRQALSEAPNGNQGFMTLPPASSRTTELIPSKLSPRPYHLXXXXXXXQHSAGVIA 471 LLDP QRQAL+E NQGFM LP S+R +E+ K RPY+L + + G IA Sbjct: 256 LLDPMQRQALNERLK-NQGFMPLPLPSARNSEVSSLKAPSRPYYLQNGNSTARQTGGTIA 314 Query: 470 SPAKSVVSKIVDLMFGI 420 SP KS+VSKI+DLMFG+ Sbjct: 315 SPTKSLVSKIMDLMFGV 331