BLASTX nr result

ID: Coptis24_contig00007032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007032
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   275   5e-72
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   272   4e-71
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   267   1e-69
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   256   3e-66
dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa ...   254   6e-66

>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  275 bits (703), Expect = 5e-72
 Identities = 145/206 (70%), Positives = 164/206 (79%), Gaps = 5/206 (2%)
 Frame = -1

Query: 609  RDIDMWANGDLSVVGERGTNLSGGQQQRIQLARAIYSDSDVYLLDDRFSAVDAHTKAHLF 430
            RDI +W NGDLSVVGERG NLSGGQ+QRIQLARAIYS+SDVY LDD FSAVDAHT AHLF
Sbjct: 708  RDIQLWYNGDLSVVGERGMNLSGGQKQRIQLARAIYSESDVYFLDDPFSAVDAHTGAHLF 767

Query: 429  QECVMQFLAQKTIIYVTHQLEFLDASDLVLVIKDGSIVQSGKYEDLIANPYGELVRQMSA 250
            Q+C+MQ L+QKT+IYVTHQLEFLDASDLVLV+KDG IVQSGKYEDLIA+P  ELVRQM+A
Sbjct: 768  QKCLMQILSQKTVIYVTHQLEFLDASDLVLVMKDGIIVQSGKYEDLIADPNSELVRQMTA 827

Query: 249  HRQSLSQVTPHEDNISFTCGTNSINPTDHTEEKWANLI-----LDNNKEEVTETGRVKWQ 85
            H +SL QV P ++N  FT         D  EE   + I     LD   +E TE+GRVKW 
Sbjct: 828  HNKSLDQVNPSQEN-CFTNKPPQKKKIDLIEENSHDPISNGKLLDGIHKEETESGRVKWH 886

Query: 84   VYSTFVSSAYKGSLIPVILLCQVLFQ 7
            VYSTF++SAYKG L+PVILLCQVLFQ
Sbjct: 887  VYSTFITSAYKGGLVPVILLCQVLFQ 912


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  272 bits (695), Expect = 4e-71
 Identities = 140/232 (60%), Positives = 175/232 (75%), Gaps = 31/232 (13%)
 Frame = -1

Query: 609  RDIDMWANGDLSVVGERGTNLSGGQQQRIQLARAIYSDSDVYLLDDRFSAVDAHTKAHLF 430
            +DI++WA+GDL+VVGERG NLSGGQ+QRIQLARA+YS+SDVY+LDD FSAVDAHT  HLF
Sbjct: 586  QDIEIWADGDLTVVGERGMNLSGGQKQRIQLARAVYSNSDVYILDDPFSAVDAHTGTHLF 645

Query: 429  Q--------------------------ECVMQFLAQKTIIYVTHQLEFLDASDLVLVIKD 328
            +                          +C+MQ L+QKT+IY THQLEFLDA+DLVLV KD
Sbjct: 646  KARIFLIFFCFLFISRATLLPCRYSHLKCLMQLLSQKTVIYATHQLEFLDAADLVLVTKD 705

Query: 327  GSIVQSGKYEDLIANPYGELVRQMSAHRQSLSQVTPHEDNISFTCGTNSINPTDHTEEKW 148
            G IVQSGKYEDLIA+P GELVRQM+AHR+SL+QV P +++  FT G++ +N  + TEEK+
Sbjct: 706  GVIVQSGKYEDLIADPTGELVRQMAAHRRSLNQVNPPQEDNPFTGGSSQLNQNEVTEEKF 765

Query: 147  -----ANLILDNNKEEVTETGRVKWQVYSTFVSSAYKGSLIPVILLCQVLFQ 7
                  +      +EEV+ETGRVKW VYSTF++SAYKG+L+P+ILLCQVLFQ
Sbjct: 766  EGPTGTDRFSRKTQEEVSETGRVKWSVYSTFITSAYKGALVPIILLCQVLFQ 817


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  267 bits (682), Expect = 1e-69
 Identities = 132/206 (64%), Positives = 167/206 (81%), Gaps = 5/206 (2%)
 Frame = -1

Query: 609  RDIDMWANGDLSVVGERGTNLSGGQQQRIQLARAIYSDSDVYLLDDRFSAVDAHTKAHLF 430
            +DI +W +GDL+V+GERG NLSGGQ+QRIQLARA+YS+SDVY+LDD FSAVDAHT  HLF
Sbjct: 708  QDIRIWTHGDLTVIGERGINLSGGQKQRIQLARAVYSNSDVYILDDPFSAVDAHTGTHLF 767

Query: 429  QECVMQFLAQKTIIYVTHQLEFLDASDLVLVIKDGSIVQSGKYEDLIANPYGELVRQMSA 250
            ++C+ Q L+QKT+IY THQLEF+DA+DLVLV+KDG IVQSGKYEDLIA+P  ELVRQM+A
Sbjct: 768  KKCLAQLLSQKTVIYATHQLEFVDAADLVLVMKDGIIVQSGKYEDLIADPTSELVRQMAA 827

Query: 249  HRQSLSQVTPHEDNISFTCGTNSINPTDHTEEKWA-----NLILDNNKEEVTETGRVKWQ 85
            H++SL+QV P  ++ + T     +N  + TEE+       + + +  +EE TETGRVKW 
Sbjct: 828  HKKSLNQVNPPPEDNALTSVACQLNQNEVTEEELEEPISNSRLSEGTQEEETETGRVKWS 887

Query: 84   VYSTFVSSAYKGSLIPVILLCQVLFQ 7
            VYSTFV+SAYKG+L+PVILLCQV FQ
Sbjct: 888  VYSTFVTSAYKGALVPVILLCQVFFQ 913


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  256 bits (653), Expect = 3e-66
 Identities = 132/206 (64%), Positives = 162/206 (78%), Gaps = 5/206 (2%)
 Frame = -1

Query: 609 RDIDMWANGDLSVVGERGTNLSGGQQQRIQLARAIYSDSDVYLLDDRFSAVDAHTKAHLF 430
           +DI+ WA+GDL+VVGERG NLSGGQ+QRIQLARA+YS+SDVY+LDD FSAVDAHT  HL 
Sbjct: 325 QDIEQWADGDLTVVGERGVNLSGGQKQRIQLARALYSNSDVYILDDPFSAVDAHTGTHL- 383

Query: 429 QECVMQFLAQKTIIYVTHQLEFLDASDLVLVIKDGSIVQSGKYEDLIANPYGELVRQMSA 250
            +C+MQ L+QKT+IY THQLEFL+ +DLVLV+KDG IVQSGKYEDLIA+P GELVRQM A
Sbjct: 384 NKCLMQLLSQKTVIYATHQLEFLEDADLVLVMKDGMIVQSGKYEDLIADPTGELVRQMVA 443

Query: 249 HRQSLSQVTPHEDNISFTCGTNSINPTDHTEEKW-----ANLILDNNKEEVTETGRVKWQ 85
           HR+SL                N +N  + TEEK+     ++   +  +EEV+ETGRVKW 
Sbjct: 444 HRRSL----------------NQLNQIEVTEEKFEEPSSSDRFSERTQEEVSETGRVKWS 487

Query: 84  VYSTFVSSAYKGSLIPVILLCQVLFQ 7
           VYSTF++SAYKG+L+P+ILLCQVLFQ
Sbjct: 488 VYSTFITSAYKGALVPIILLCQVLFQ 513


>dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa Japonica Group]
            gi|27368889|emb|CAD59602.1| MRP-like ABC transporter
            [Oryza sativa Japonica Group]
          Length = 1386

 Score =  254 bits (650), Expect = 6e-66
 Identities = 125/201 (62%), Positives = 161/201 (80%)
 Frame = -1

Query: 609  RDIDMWANGDLSVVGERGTNLSGGQQQRIQLARAIYSDSDVYLLDDRFSAVDAHTKAHLF 430
            RD+++WANGD+++VGERG NLSGGQ+QRIQLARA+YSDSDVYLLDD FSAVDAHT AHLF
Sbjct: 641  RDLELWANGDMTMVGERGMNLSGGQKQRIQLARALYSDSDVYLLDDPFSAVDAHTGAHLF 700

Query: 429  QECVMQFLAQKTIIYVTHQLEFLDASDLVLVIKDGSIVQSGKYEDLIANPYGELVRQMSA 250
            +EC+++ ++ KT+IYVTHQLEFL  +DLVLV+KDG IVQSGKY+DL+A+  GEL  QM+A
Sbjct: 701  KECLLRLMSSKTVIYVTHQLEFLRDADLVLVMKDGRIVQSGKYDDLVADRNGELSMQMAA 760

Query: 249  HRQSLSQVTPHEDNISFTCGTNSINPTDHTEEKWANLILDNNKEEVTETGRVKWQVYSTF 70
            H QSLSQVTP + ++     ++    T+ TE +  + ++    EE  E+GRVKW +Y  F
Sbjct: 761  HNQSLSQVTPAKAHVLTKNKSHKRRQTELTEIELDHNVIGRECEEERESGRVKWDIYRKF 820

Query: 69   VSSAYKGSLIPVILLCQVLFQ 7
            V+SAY G+L+PVIL CQVLFQ
Sbjct: 821  VNSAYGGALVPVILACQVLFQ 841


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