BLASTX nr result
ID: Coptis24_contig00007030
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007030 (563 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305712.1| predicted protein [Populus trichocarpa] gi|2... 231 8e-59 gb|ABK93213.1| unknown [Populus trichocarpa] gi|118485561|gb|ABK... 231 8e-59 ref|XP_002519698.1| 60S ribosomal protein L18a, putative [Ricinu... 229 2e-58 ref|XP_002317384.1| predicted protein [Populus trichocarpa] gi|1... 228 4e-58 dbj|BAH20340.1| AT3G14600 [Arabidopsis thaliana] 227 1e-57 >ref|XP_002305712.1| predicted protein [Populus trichocarpa] gi|224079000|ref|XP_002305713.1| predicted protein [Populus trichocarpa] gi|224079007|ref|XP_002305715.1| predicted protein [Populus trichocarpa] gi|118481545|gb|ABK92715.1| unknown [Populus trichocarpa] gi|222848676|gb|EEE86223.1| predicted protein [Populus trichocarpa] gi|222848677|gb|EEE86224.1| predicted protein [Populus trichocarpa] gi|222848679|gb|EEE86226.1| predicted protein [Populus trichocarpa] Length = 178 Score = 231 bits (588), Expect = 8e-59 Identities = 110/116 (94%), Positives = 111/116 (95%) Frame = -3 Query: 561 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP 382 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVRFP Sbjct: 62 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 121 Query: 381 CIQIIKTATIPAKLCKRESTKQFHKKDIKFPLVFTKVRPPSRKLKTTYKASRPNVF 214 CIQIIKTATIPAKLCKRESTKQFH IKFPLVF KVRPPSRKLKTTYKASRPN+F Sbjct: 122 CIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLF 177 >gb|ABK93213.1| unknown [Populus trichocarpa] gi|118485561|gb|ABK94632.1| unknown [Populus trichocarpa] Length = 178 Score = 231 bits (588), Expect = 8e-59 Identities = 110/116 (94%), Positives = 111/116 (95%) Frame = -3 Query: 561 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP 382 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVRFP Sbjct: 62 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 121 Query: 381 CIQIIKTATIPAKLCKRESTKQFHKKDIKFPLVFTKVRPPSRKLKTTYKASRPNVF 214 CIQIIKTATIPAKLCKRESTKQFH IKFPLVF KVRPPSRKLKTTYKASRPN+F Sbjct: 122 CIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLF 177 >ref|XP_002519698.1| 60S ribosomal protein L18a, putative [Ricinus communis] gi|223541115|gb|EEF42671.1| 60S ribosomal protein L18a, putative [Ricinus communis] Length = 303 Score = 229 bits (585), Expect = 2e-58 Identities = 109/116 (93%), Positives = 111/116 (95%) Frame = -3 Query: 561 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP 382 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVRFP Sbjct: 187 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 246 Query: 381 CIQIIKTATIPAKLCKRESTKQFHKKDIKFPLVFTKVRPPSRKLKTTYKASRPNVF 214 CIQIIKTATIPAKLCKRESTKQFH IKFPLVF KVRPP+RKLKTTYKASRPN+F Sbjct: 247 CIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 302 >ref|XP_002317384.1| predicted protein [Populus trichocarpa] gi|118483631|gb|ABK93710.1| unknown [Populus trichocarpa] gi|222860449|gb|EEE97996.1| predicted protein [Populus trichocarpa] Length = 178 Score = 228 bits (582), Expect = 4e-58 Identities = 109/116 (93%), Positives = 110/116 (94%) Frame = -3 Query: 561 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP 382 AINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVRFP Sbjct: 62 AINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 121 Query: 381 CIQIIKTATIPAKLCKRESTKQFHKKDIKFPLVFTKVRPPSRKLKTTYKASRPNVF 214 CIQIIKTATIPAKLCKRESTKQFH IKFPLVF KVRPPSRKLKTTYKASRPN+F Sbjct: 122 CIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLF 177 >dbj|BAH20340.1| AT3G14600 [Arabidopsis thaliana] Length = 150 Score = 227 bits (578), Expect = 1e-57 Identities = 107/116 (92%), Positives = 110/116 (94%) Frame = -3 Query: 561 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP 382 AINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP Sbjct: 34 AINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP 93 Query: 381 CIQIIKTATIPAKLCKRESTKQFHKKDIKFPLVFTKVRPPSRKLKTTYKASRPNVF 214 CIQIIKTAT+PAKLCKRE TKQFH IKFPLVF KVRPPSRKLKTTYKAS+PN+F Sbjct: 94 CIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLF 149