BLASTX nr result
ID: Coptis24_contig00007024
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007024
(2227 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279093.2| PREDICTED: uncharacterized protein LOC100242... 353 1e-94
emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera] 352 3e-94
ref|XP_002314870.1| predicted protein [Populus trichocarpa] gi|2... 333 2e-88
ref|XP_002529123.1| DNA binding protein, putative [Ricinus commu... 314 6e-83
ref|XP_003614539.1| Agenet and bromo-adjacent homology (BAH) dom... 313 2e-82
>ref|XP_002279093.2| PREDICTED: uncharacterized protein LOC100242253 [Vitis vinifera]
Length = 731
Score = 353 bits (906), Expect = 1e-94
Identities = 217/528 (41%), Positives = 286/528 (54%), Gaps = 36/528 (6%)
Frame = -1
Query: 2227 DLSVECIDGLATVLSPQHFEKYLNVAKCSLWEPFLCHRQFDNDEIKDFDITQVQGYWKQE 2048
DLS+ECIDGLATVL PQHFEK+LN A + EPF+CH+QFDNDE+K FDITQV+GYWKQE
Sbjct: 228 DLSIECIDGLATVLGPQHFEKFLNEATHTQLEPFVCHKQFDNDEVKPFDITQVKGYWKQE 287
Query: 2047 ILRCMYTTTASTPLDYKPFDDNMELHDCDDNDEDAXXXXXXXXXXXXXXKDIDQHLNDKN 1868
ILR MYT+T + + DD + N DA D L +K
Sbjct: 288 ILRYMYTSTLMPDVRSQSSDDV----GVEGNLNDASGSRPNKRHCRSEDADACLQLTNKE 343
Query: 1867 DAMVAAHLGVQKFCNGLVNCARVEMRGLLEPNYVAG--SRKELKQSTSQRYFAVNCHVEV 1694
+++ + Q N L++ L+ RKE ++ A+ VEV
Sbjct: 344 ESVDTSRANFQNISNSLIDYRNEPETCALKDGSAVPFIHRKEAIIQKLPQFLAIGSQVEV 403
Query: 1693 LSQDSGIRGCWFRAVVIKRSKEKVKVRYQDIKDAEDDSKNVEEWVLASRIAVPDELGIHL 1514
LSQDSGIRGCW RA++IK+ + KVKVRYQDI DA D++ N+EEW+LASR+AVPDE G+ +
Sbjct: 404 LSQDSGIRGCWLRALIIKKHRCKVKVRYQDIMDAADETSNLEEWILASRVAVPDESGLRI 463
Query: 1513 TGRTTVRPFPLPNKDGGSLGFVDVGSPVDACWHDGWWEGIVVRKEADGKMLVYFP----- 1349
GRTT+RP P + G DVGS VDA WHDGWWEGIVV+KE++ ++ VYFP
Sbjct: 464 CGRTTIRPPPPGSNKGRVSWAFDVGSVVDAWWHDGWWEGIVVQKESEDRIHVYFPGLKRY 523
Query: 1348 ----------------------------GEKKLSIFCCNDLRRSQDWLCEKWNFIEGRMD 1253
GEK+ +F +DLR S++W W ++ R D
Sbjct: 524 PFQILNAMLMQNGNQRVVHILKLLYFFAGEKQELVFGRSDLRHSEEWYENSWKHMKERPD 583
Query: 1252 LVSSILANIEAVQGGGKSCVEIGHSIQLELSNNRQIGSSFADFVSSKKEEIVVKHTAPNL 1073
LV+SIL+ E+ KS S+ + ++ D SKK+E ++ L
Sbjct: 584 LVTSILSGRESKHVVSKS------------SDGKLAQTAICDIGWSKKDEGGCVNS--QL 629
Query: 1072 ETVNDFGKGIAAVPNIAKDTYLAQLRWKTSRKRGRNGERLHRRGXXXXXXXXXXXXXXSR 893
++ ND KG+ VP++ KD L+QL+WKTSRKR R G S
Sbjct: 630 DSGNDKLKGLGFVPDLLKDDTLSQLKWKTSRKRRRVS------GGSVQKLHVNVNTSKSA 683
Query: 892 EDMEPSPDHQRFLAPNSRKFDHESCKYQGDSLLGVS-IPPLTGLVLSR 752
++ S RF P S K D E+CKY GDSL S +PPLT LV+SR
Sbjct: 684 SEIMGSHACDRFFIPKSLKVDCENCKYVGDSLFSSSVVPPLTNLVMSR 731
>emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera]
Length = 669
Score = 352 bits (902), Expect = 3e-94
Identities = 210/493 (42%), Positives = 277/493 (56%), Gaps = 1/493 (0%)
Frame = -1
Query: 2227 DLSVECIDGLATVLSPQHFEKYLNVAKCSLWEPFLCHRQFDNDEIKDFDITQVQGYWKQE 2048
DLS+ECIDGLATVL PQHFEK+LN A + EPF+CH+QFDNDE+K FDITQV+GYWKQE
Sbjct: 228 DLSIECIDGLATVLGPQHFEKFLNEATHTQLEPFVCHKQFDNDEVKPFDITQVKGYWKQE 287
Query: 2047 ILRCMYTTTASTPLDYKPFDDNMELHDCDDNDEDAXXXXXXXXXXXXXXKDIDQHLNDKN 1868
ILR MYT+T + + DD + N DA D L +K
Sbjct: 288 ILRYMYTSTLMPDVRSQSSDDV----GVEGNLNDASGSRPNKRHCRSEDADACLQLTNKE 343
Query: 1867 DAMVAAHLGVQKFCNGLVNCARVEMRGLLEPNYVAGSRKELKQSTSQRYFAVNCHVEVLS 1688
+++ + Q N L++ EP C ++ S
Sbjct: 344 ESVDTSRANFQNISNSLIDYRN-------EPE--------------------TCALKDGS 376
Query: 1687 QDSGIRGCWFRAVVIKRSKEKVKVRYQDIKDAEDDSKNVEEWVLASRIAVPDELGIHLTG 1508
DSGIRGCW RA++IK+ + KVKVRYQDI DA D++ N+EEW+LASR+AVPDE G+ + G
Sbjct: 377 ADSGIRGCWLRALIIKKHRCKVKVRYQDIMDAADETSNLEEWILASRVAVPDESGLRICG 436
Query: 1507 RTTVRPFPLPNKDGGSLGFVDVGSPVDACWHDGWWEGIVVRKEADGKMLVYFPGEKKLSI 1328
RTT+RP P + G DVGS VDA WHDGWWEGIVV+KE++ ++ VYFPGEK+ +
Sbjct: 437 RTTIRPPPPGSNKGRVSWAFDVGSVVDAWWHDGWWEGIVVQKESEDRIHVYFPGEKQELV 496
Query: 1327 FCCNDLRRSQDWLCEKWNFIEGRMDLVSSILANIEAVQGGGKSCVEIGHSIQLELSNNRQ 1148
F +DLR S++W W ++ R DLV+SIL+ E+ KS S+ +
Sbjct: 497 FGRSDLRHSEEWYENSWKHMKERPDLVTSILSGRESKHVVSKS------------SDGKL 544
Query: 1147 IGSSFADFVSSKKEEIVVKHTAPNLETVNDFGKGIAAVPNIAKDTYLAQLRWKTSRKRGR 968
++ D SKK+E ++ L++ ND KG+ VP++ KD L+QL+WKTSRKR R
Sbjct: 545 AQTAICDIGWSKKDEGGCVNS--QLDSGNDKLKGLGFVPDLLKDDTLSQLKWKTSRKRRR 602
Query: 967 NGERLHRRGXXXXXXXXXXXXXXSREDMEPSPDHQRFLAPNSRKFDHESCKYQGDSLLGV 788
G S ++ S RF P S K D E+CKY GDSL
Sbjct: 603 VS------GGSVQKLHVNVNTSKSASEIMGSHACDRFFIPKSLKVDCENCKYVGDSLFSS 656
Query: 787 S-IPPLTGLVLSR 752
S +PPLT LV+SR
Sbjct: 657 SVVPPLTNLVMSR 669
>ref|XP_002314870.1| predicted protein [Populus trichocarpa] gi|222863910|gb|EEF01041.1|
predicted protein [Populus trichocarpa]
Length = 598
Score = 333 bits (853), Expect = 2e-88
Identities = 193/504 (38%), Positives = 284/504 (56%), Gaps = 12/504 (2%)
Frame = -1
Query: 2227 DLSVECIDGLATVLSPQHFEKYLNVAKCSLWEPFLCHRQFDNDEIKDFDITQVQGYWKQE 2048
DL++ECIDG+ATVLSPQHF+K+LN A C+ + F+C + FDN+++ FDITQV+GYW+QE
Sbjct: 132 DLNIECIDGVATVLSPQHFKKFLNEAVCTRFNAFVCDKLFDNEDVNHFDITQVEGYWRQE 191
Query: 2047 ILRCMYTTTASTPLDYKPFDDNMELHDCDDNDEDAXXXXXXXXXXXXXXKDIDQHLNDKN 1868
IL + + + + + + + D+N + L D
Sbjct: 192 ILGYLSVLPSKCLANSQYPGNGLRVEGHDNNASRMRPKKRL------------RRLKDNG 239
Query: 1867 DAMVAAHLGVQKFCNGLVNC--ARVEMRGLLEPNYVAGSRKELKQSTSQ-----RYFAVN 1709
D + C + N +R++ + E G ST++ + V+
Sbjct: 240 DFCIVRKESTTARCFNMQNLHNSRIDSKTGNEICSQRGEEHTAFLSTTEVMQNPQNLHVD 299
Query: 1708 CHVEVLSQDSGIRGCWFRAVVIKRSKEKVKVRYQDIKDAEDDSKNVEEWVLASRIAVPDE 1529
VEVLSQDSGIRGCWFRA +IK+ K+KVKVRYQDI DA D++ +EEWVLASR+A PD+
Sbjct: 300 SEVEVLSQDSGIRGCWFRASIIKKHKDKVKVRYQDISDAADEANKLEEWVLASRVAAPDQ 359
Query: 1528 LGIHLTGRTTVRPFPLPNKDGGSLGFVDVGSPVDACWHDGWWEGIVVRKEADGKMLVYFP 1349
L I + GRT VRP P NK+ + DVG+ VDA W+D WWEG+VV+KE++ ++ V+FP
Sbjct: 360 LAIRIGGRTVVRPTPQFNKERAA-SVADVGTAVDAWWNDAWWEGVVVQKESEDRIHVFFP 418
Query: 1348 GEKKLSIFCCNDLRRSQDWLCEKWNFIEGRMDLVSSILANIEAVQGGGKSCVEIGHSIQL 1169
GEKK S+FCC+DLR SQ+W+ +W IEGR D++S + + E Q +S + Q
Sbjct: 419 GEKKESVFCCSDLRLSQEWVGNEWIHIEGRPDILSHLSSCWERKQLKFRS--DESKLAQA 476
Query: 1168 ELSNNRQIGSSFADFVSSKKEEIVVKHTAPNLETVNDFGKGIAAVPNIAKDTYLAQLRWK 989
+ ++RQ G + + +L++ D GK + VP+++KD LAQLRW+
Sbjct: 477 AIPDSRQSGKANPGCIDY------------SLDSGCDMGKELKVVPDLSKDNLLAQLRWR 524
Query: 988 TSRKR----GRNGERLHRRGXXXXXXXXXXXXXXSREDMEPSPDHQRFLAPNSRKFDHES 821
+ +KR G +G ++H ++ S +R+L P + K DHE+
Sbjct: 525 SIKKRRRGSGSSGHKMH----------LYNNGGRRLSEVIGSNSGERYLIPTALKVDHEN 574
Query: 820 CKYQGDSLL-GVSIPPLTGLVLSR 752
CKY GDSL + PL+ LV+SR
Sbjct: 575 CKYMGDSLFTSAVVQPLSSLVMSR 598
>ref|XP_002529123.1| DNA binding protein, putative [Ricinus communis]
gi|223531402|gb|EEF33236.1| DNA binding protein, putative
[Ricinus communis]
Length = 685
Score = 314 bits (805), Expect = 6e-83
Identities = 193/507 (38%), Positives = 281/507 (55%), Gaps = 15/507 (2%)
Frame = -1
Query: 2227 DLSVECIDGLATVLSPQHFEKYLNVAKCSLWEPFLCHRQFDNDEIKDFDITQVQGYWKQE 2048
DLS+ECI+G+ATVLSPQHFEK+L A+ + +PF+C++QF+ND+I+ FDITQV+GYWKQE
Sbjct: 221 DLSIECINGIATVLSPQHFEKFLKEARLIVLDPFVCYKQFENDDIRPFDITQVKGYWKQE 280
Query: 2047 ILRCMYTTTASTPLDYKPFDDNMELHDCDDNDEDAXXXXXXXXXXXXXXKDIDQHLNDKN 1868
I R +YT ++ D + + + ND+ +H K+
Sbjct: 281 IFRYLYTVSSIMEQRDSQHPDAAQKLETNINDDSEFRPRK-------------RHHRSKD 327
Query: 1867 DAMVAAH-------LGVQKFCNGLVNCAR-VEMRGLLEPNYVAGSRKELKQSTSQRYFAV 1712
D A + + N +C R EM L +A + +Y V
Sbjct: 328 DLHAGAKQPVDTMDVNMHDVDNSWADCKRPTEMCCLTGGESIAPLSTTGAEQNPLQYLKV 387
Query: 1711 NCHVEVLSQDSGIRGCWFRAVVIKRSKEKVKVRYQDIKDAEDDSKNVEEWVLASRIAVPD 1532
VEVLSQDSGIRGCWFRA++IK K KVKVRY+DIKDAE+++ N+EEW+L +R+AV D
Sbjct: 388 GSKVEVLSQDSGIRGCWFRALIIKVHKSKVKVRYEDIKDAENEANNLEEWILTTRVAVSD 447
Query: 1531 ELGIHLTGRTTVRPFPLPNKDGGSLGFVDVGSPVDACWHDGWWEGIVVRKEADGKMLVYF 1352
+LG + GR +RP P NK GF +VG+ VD WHD W EGIVV +E++ + VYF
Sbjct: 448 DLGFRVCGRPIIRPLPKCNKGRVLWGF-EVGTAVDVWWHDVWQEGIVVSEESEHRFHVYF 506
Query: 1351 PGEKKLSIFCCNDLRRSQDWLCEKWNFIEGRMDLVSSILANIEAVQGGGKSCVEIGHSIQ 1172
PGEK+ +F C DLR SQ+WL +W ++ R D+++S+ + ++ K V+ S
Sbjct: 507 PGEKQELVFGCADLRHSQEWLGNRWMHLKCRPDILTSLSSFLD------KQVVKSNES-- 558
Query: 1171 LELSNNRQIGSSFADFVSSKKEEIVVKHTAPN--LETVNDFGKGIAAVPNIAKDTYLAQL 998
+ I + D S+K K P+ L++ +D + V ++ KD LAQL
Sbjct: 559 ------KSIENGICDTRQSEK----FKTGCPDDLLDSGSDGDGELKVVRDLLKDDRLAQL 608
Query: 997 RWKTSRKRGRNG----ERLHRRGXXXXXXXXXXXXXXSREDMEPSPDHQRFLAPNSRKFD 830
RW +S+KR R+ +R+H + S ++ S +RF+ P S K D
Sbjct: 609 RWNSSKKRRRSSGISTQRMHPK----------ESGGKSSSEVISSRGCERFVFPMSIKVD 658
Query: 829 HESCKYQGDSLLGVSI-PPLTGLVLSR 752
HE+CK+ DSL ++ PLT L++SR
Sbjct: 659 HENCKFLRDSLFSSAVAQPLTNLIMSR 685
>ref|XP_003614539.1| Agenet and bromo-adjacent homology (BAH) domain-containing
protein-like protein [Medicago truncatula]
gi|355515874|gb|AES97497.1| Agenet and bromo-adjacent
homology (BAH) domain-containing protein-like protein
[Medicago truncatula]
Length = 502
Score = 313 bits (801), Expect = 2e-82
Identities = 201/498 (40%), Positives = 279/498 (56%), Gaps = 7/498 (1%)
Frame = -1
Query: 2224 LSVECIDGLATVLSPQHFEKYLNVAKCSLWEPFLCHRQFDNDEIKDFDITQVQGYWKQEI 2045
LS+ECIDGL +VLSPQH+ K+ N A+ + EP++C ++F D++KDFDITQ++GYWKQEI
Sbjct: 44 LSIECIDGLTSVLSPQHYAKFRNKARHARPEPYVCSKKFGKDDVKDFDITQMEGYWKQEI 103
Query: 2044 LRCMYTTTASTPLDYK-PFDDNMELHDCDDNDEDAXXXXXXXXXXXXXXKDIDQHLNDKN 1868
L+ MY S DD EL +E+ + D
Sbjct: 104 LKQMYPHVESNSSGSSGKSDDGPEL------EENLHSSSAIRPKKKQRCTKV-----DGK 152
Query: 1867 DAMVAAHLGVQKFCNGLVNCARVEMRGLLEPNYVAGSRK--ELKQST-SQRYFAVNCHVE 1697
DA+ L ++K N ++ L + G+ K +K++ + +Y AV +VE
Sbjct: 153 DAVELGSLQLEKLSNCKIDAKTSSGNKLEGSVKLVGTTKLATIKETNEASQYLAVGSNVE 212
Query: 1696 VLSQDSGIRGCWFRAVVIKRSKEKVKVRYQDIKDAEDDSKNVEEWVLASRIAVPDELGIH 1517
VLSQDSGIRGCWFRA VIKR K+KVKV+Y DI+DAED++ N+EEW+LASR VPD+LG+
Sbjct: 213 VLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEANNLEEWILASRPVVPDDLGLR 272
Query: 1516 LTGRTTVRPFPLPNKDGGSLGFV-DVGSPVDACWHDGWWEGIVVRKEADGKMLVYFPGEK 1340
+ RT +R PL K G + FV DVG VDA WHDGWWEGIVV+KE+D K VYFPGEK
Sbjct: 273 VEERTKIR--PLLEKRG--ISFVGDVGYIVDAWWHDGWWEGIVVQKESDDKYHVYFPGEK 328
Query: 1339 KLSIFCCNDLRRSQDWLCEKWNFIEGRMDLVSSILANIEAVQGGGKSCVEIGHSIQLELS 1160
K+SIF +LR S+DW W + R D+V+ L++++A Q KS
Sbjct: 329 KMSIFGPCNLRHSRDWTGNGWVKVRERPDIVTCKLSSLKAKQSSCKS-----------EE 377
Query: 1159 NNRQIGSSFADFVSSKKEEIVVKHTAPNLETVNDFGKGIAAVPNIAKDTYLAQLRWKTSR 980
+++ +S D + SK+ + A + + D + VP++ KD QLRWK+SR
Sbjct: 378 DSKSTVASIGDGIQSKQAD------AYSGSSERDKLRKNEEVPDLVKDVLSLQLRWKSSR 431
Query: 979 KRGRNGERLHRRGXXXXXXXXXXXXXXSREDMEPSPDHQRFLAPNSRKFDHESCKYQGD- 803
KR R+G ++ + D S F+ P S K DH+ KYQGD
Sbjct: 432 KRNRSGTSQQKQ--QSNDIHRKLSPKFLQSDATDS-----FVVPASLKVDHDDYKYQGDP 484
Query: 802 SLLGVS-IPPLTGLVLSR 752
S+ G S +P LT +V+ R
Sbjct: 485 SIFGSSVVPSLTNMVMCR 502