BLASTX nr result

ID: Coptis24_contig00007023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007023
         (1432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243...   357   3e-96
emb|CBI20080.3| unnamed protein product [Vitis vinifera]              357   3e-96
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2...   348   2e-93
ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric...   340   5e-91
ref|XP_002446388.1| hypothetical protein SORBIDRAFT_06g015125 [S...   315   2e-83

>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
          Length = 1091

 Score =  357 bits (917), Expect = 3e-96
 Identities = 173/273 (63%), Positives = 212/273 (77%), Gaps = 2/273 (0%)
 Frame = -1

Query: 1432 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEVLGQYNWPELEETDFVYGSSSIG 1253
            G  F+ I  +   EH+++ICSLVASL+RCVGL RLQE+LG Y WPE +ETDF+YGSSSIG
Sbjct: 751  GASFSYILKMMQPEHLSAICSLVASLKRCVGLWRLQEILGGYQWPESQETDFIYGSSSIG 810

Query: 1252 TSINLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDAS 1073
            +SIN QFLAAFS+AAGK S QF ESDESDPEWG W+A+ E ++PS++I+FPTIERVK++S
Sbjct: 811  SSINAQFLAAFSAAAGKRSLQFFESDESDPEWGCWSASQESRSPSIKIVFPTIERVKNSS 870

Query: 1072 CGIWPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFG 893
            CGI P RR+LC SE TWQRL++    HDAIP+PS RV +PMHVKVA+RRF S  +SSSFG
Sbjct: 871  CGILPSRRILCFSEKTWQRLKNVSTIHDAIPHPSDRVKHPMHVKVAQRRFQSKMDSSSFG 930

Query: 892  WVYCGSHNFSPAAWGRPTTST-GLK-FGVAETNCSLGARLHICNYELGIIFIVPPVNISL 719
            WVYCGSHNFS AAWGRP ++  G+K  G  + +     RLHICNYELGIIFI PP     
Sbjct: 931  WVYCGSHNFSAAAWGRPISNPFGIKTTGTHKADSCFDQRLHICNYELGIIFIFPPSATKG 990

Query: 718  EISQQNLSFDDITLPFILPAPKYRPRDRAATAK 620
              +Q + + DD+ LPF++PAPKY PRDR AT +
Sbjct: 991  NGNQSSTNLDDVVLPFVMPAPKYGPRDRPATTQ 1023


>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  357 bits (917), Expect = 3e-96
 Identities = 173/273 (63%), Positives = 212/273 (77%), Gaps = 2/273 (0%)
 Frame = -1

Query: 1432 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEVLGQYNWPELEETDFVYGSSSIG 1253
            G  F+ I  +   EH+++ICSLVASL+RCVGL RLQE+LG Y WPE +ETDF+YGSSSIG
Sbjct: 692  GASFSYILKMMQPEHLSAICSLVASLKRCVGLWRLQEILGGYQWPESQETDFIYGSSSIG 751

Query: 1252 TSINLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDAS 1073
            +SIN QFLAAFS+AAGK S QF ESDESDPEWG W+A+ E ++PS++I+FPTIERVK++S
Sbjct: 752  SSINAQFLAAFSAAAGKRSLQFFESDESDPEWGCWSASQESRSPSIKIVFPTIERVKNSS 811

Query: 1072 CGIWPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFG 893
            CGI P RR+LC SE TWQRL++    HDAIP+PS RV +PMHVKVA+RRF S  +SSSFG
Sbjct: 812  CGILPSRRILCFSEKTWQRLKNVSTIHDAIPHPSDRVKHPMHVKVAQRRFQSKMDSSSFG 871

Query: 892  WVYCGSHNFSPAAWGRPTTST-GLK-FGVAETNCSLGARLHICNYELGIIFIVPPVNISL 719
            WVYCGSHNFS AAWGRP ++  G+K  G  + +     RLHICNYELGIIFI PP     
Sbjct: 872  WVYCGSHNFSAAAWGRPISNPFGIKTTGTHKADSCFDQRLHICNYELGIIFIFPPSATKG 931

Query: 718  EISQQNLSFDDITLPFILPAPKYRPRDRAATAK 620
              +Q + + DD+ LPF++PAPKY PRDR AT +
Sbjct: 932  NGNQSSTNLDDVVLPFVMPAPKYGPRDRPATTQ 964


>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
            predicted protein [Populus trichocarpa]
          Length = 1131

 Score =  348 bits (894), Expect = 2e-93
 Identities = 173/273 (63%), Positives = 207/273 (75%), Gaps = 2/273 (0%)
 Frame = -1

Query: 1432 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEVLGQYNWPELEETDFVYGSSSIG 1253
            GPCF  + SL  TEHV + CSLVAS+QRC G+ RL+EVLGQY WP+ +++DF+YGSSSIG
Sbjct: 796  GPCFPNMMSLMQTEHVLAFCSLVASIQRCTGIWRLEEVLGQYKWPDSQQSDFIYGSSSIG 855

Query: 1252 TSINLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDAS 1073
             S+N QFLAAFS+AAGK S +  +S+ESDPEWG W+A+ E +NPS++IIFPTIERVK+A 
Sbjct: 856  -SVNAQFLAAFSAAAGKRSPELFDSEESDPEWGCWSASQELRNPSIKIIFPTIERVKNAC 914

Query: 1072 CGIWPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFG 893
             GI P RR+LC SE TWQRLRS  I HDAIP+P  RVG PMHVKVARRRF S TN+SSFG
Sbjct: 915  NGISPSRRILCFSEKTWQRLRSVGILHDAIPHPYDRVGQPMHVKVARRRFQSKTNASSFG 974

Query: 892  WVYCGSHNFSPAAWGRPTTST-GLKF-GVAETNCSLGARLHICNYELGIIFIVPPVNISL 719
            WVYCGSHNFS AAWGR  ++  GLK     +TN  L +RLH+ NYELGIIF  PP     
Sbjct: 975  WVYCGSHNFSAAAWGRLISNPFGLKSKETGKTNTYLSSRLHVSNYELGIIFTFPPTETKG 1034

Query: 718  EISQQNLSFDDITLPFILPAPKYRPRDRAATAK 620
              ++   + DDI LPF +PAPKY P DR ATA+
Sbjct: 1035 ITNKDCTNLDDIVLPFAVPAPKYGPTDRPATAR 1067


>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
            gi|223550173|gb|EEF51660.1| tyrosyl-DNA
            phosphodiesterase, putative [Ricinus communis]
          Length = 1148

 Score =  340 bits (872), Expect = 5e-91
 Identities = 171/291 (58%), Positives = 205/291 (70%), Gaps = 20/291 (6%)
 Frame = -1

Query: 1432 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEVLGQYNWPELEETDFVYGSSSIG 1253
            GPCF +I  +   +HV ++CSLVAS+QRC GL RLQEVL QY WPE+E++DF+YGSSSIG
Sbjct: 791  GPCFPDIMKMMLPQHVIAVCSLVASIQRCTGLWRLQEVLDQYKWPEVEQSDFIYGSSSIG 850

Query: 1252 TSINLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDAS 1073
            +SIN QFL+AFS+AAGK S Q  +S+ESDPEWG W  + E +NPS+RIIFPTIERVK+A 
Sbjct: 851  SSINAQFLSAFSAAAGKRSLQLFDSEESDPEWGCWTKSQELRNPSIRIIFPTIERVKNAC 910

Query: 1072 CGIWPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVK---------------- 941
             GI   RR+LC SE TWQRLRSA+I HDA+P+P  RVG+PMHVK                
Sbjct: 911  NGILSSRRILCFSENTWQRLRSAEILHDAVPHPYDRVGHPMHVKWPLNILYTRETDRENC 970

Query: 940  --VARRRFYSNTNSSSFGWVYCGSHNFSPAAWGRPTTST-GLKFG-VAETNCSLGARLHI 773
              VARR F S T+ SS GWVYCGSHNFS AAWGRP     GLK     +TN S G RLH+
Sbjct: 971  KQVARRCFQSKTDVSSSGWVYCGSHNFSAAAWGRPICHPFGLKSNEPGKTNLSSGLRLHV 1030

Query: 772  CNYELGIIFIVPPVNISLEISQQNLSFDDITLPFILPAPKYRPRDRAATAK 620
            CNYELGIIF+ PP       ++   + DD+ LPF++PAPKY P D  AT K
Sbjct: 1031 CNYELGIIFVFPPSRTKGIDNKDAATLDDVVLPFVVPAPKYGPTDWPATKK 1081


>ref|XP_002446388.1| hypothetical protein SORBIDRAFT_06g015125 [Sorghum bicolor]
            gi|241937571|gb|EES10716.1| hypothetical protein
            SORBIDRAFT_06g015125 [Sorghum bicolor]
          Length = 972

 Score =  315 bits (807), Expect = 2e-83
 Identities = 153/269 (56%), Positives = 184/269 (68%)
 Frame = -1

Query: 1432 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEVLGQYNWPELEETDFVYGSSSIG 1253
            GP F++IS L   EH   +CSL+ASLQRC+GL RL+EVL    WPE  ETDF+Y +SSIG
Sbjct: 637  GPEFSQISGLISNEHFPPLCSLIASLQRCLGLWRLEEVLSNIKWPETLETDFIYSASSIG 696

Query: 1252 TSINLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDAS 1073
            TSIN QF+A+F+SAAGK   Q  +S ESDPEWG W  N E K PS+ ++FPTI+RVK  +
Sbjct: 697  TSINPQFIASFASAAGKRPHQDFDSQESDPEWGCWTTNHELKKPSISLLFPTIDRVKKGA 756

Query: 1072 CGIWPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFG 893
            CGI   R LL L E TWQRLRS  IFHDAIP P  R+G+PMHVKVA+RRF S     SFG
Sbjct: 757  CGIQLCRNLLSLPEKTWQRLRSTGIFHDAIPQPYARIGHPMHVKVAQRRFKSCFGEHSFG 816

Query: 892  WVYCGSHNFSPAAWGRPTTSTGLKFGVAETNCSLGARLHICNYELGIIFIVPPVNISLEI 713
            W YCGSHNFSPAAWG+P +           +   G RLHICNYELGI+ I PP  +S   
Sbjct: 817  WTYCGSHNFSPAAWGQPLSPPSKANPSKARSSPSGPRLHICNYELGIVLIAPPPGMSKHA 876

Query: 712  SQQNLSFDDITLPFILPAPKYRPRDRAAT 626
            S+     + I LPF++P P+Y+  DR AT
Sbjct: 877  SESRHRIEGIVLPFVIPPPRYKGSDRPAT 905


Top