BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007011
         (4509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   597   e-168
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   559   e-156
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   556   e-155
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   550   e-153
gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola...   521   e-145

>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  597 bits (1540), Expect = e-168
 Identities = 284/460 (61%), Positives = 359/460 (78%)
 Frame = -2

Query: 4499 LCLQCGCLEFARLVFERMLERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLITWN 4320
            L L+CGCL  AR +F+RM++RD VS+N MI GY K+GMV  AR++F  MP E++NLI+WN
Sbjct: 166  LYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWN 225

Query: 4319 CMISGYLQSKDGFEFAWDLFSSMPERDLVSWNAMLDGCVKCGKLEVARYLFNQMPKKDAV 4140
             MISGY +S++G   AW+LF  MP+RDL+SWN+M+DGCVKCGK+E A +LFNQMPK+D V
Sbjct: 226  SMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVV 285

Query: 4139 TWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAINLFHEMML 3960
            +WA M+DGYAK+  IDIA+ LF++M   ERDVI+ NA++AGYV NG   EA+N FH+M+ 
Sbjct: 286  SWANMVDGYAKLGEIDIARGLFDEM--PERDVISCNAMMAGYVQNGHLMEALNFFHDMLS 343

Query: 3959 VSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVALIDMYSKCGSIR 3780
               L PD  T +I LSAIA+LGH  EG  +H YIE  GF L  KLGVALIDMY+KCGSI 
Sbjct: 344  RKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSID 403

Query: 3779 TALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLSVKPDDITFIGVLSACD 3600
             AL +F+++  KS+DHWN           GE+A +LFMEME+L VKPDDITFIGVL+AC+
Sbjct: 404  NALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACN 463

Query: 3599 HSGMVEEGCMFFELMRRAHCMKPKLQHYGCMVDILSRAGYLEDAMKLIASMPIEPNDVVW 3420
            H+G+V+EG M FELMRR H ++PKLQHYGCMVDIL RAG++E+A K +  MPIEPNDVVW
Sbjct: 464  HAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVW 523

Query: 3419 RALLSACKNHDNYEIGLAAAKHLMQLDYCNTSSYVLLSNLYAAYGMWSEVSRVRSMMKER 3240
            R LLSAC+NH+N+ IG   AKHL+ +D  N SSYVLLSN+YA +GMW++V R+R MMK+R
Sbjct: 524  RTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQR 583

Query: 3239 DILKVPGCSWIELEGTLHEFVVGDKSHPQSQEIYSVLEKL 3120
            D+ K+PGCS IELEG +HEF V DKSHPQ +EIYS+L+ L
Sbjct: 584  DLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSL 623



 Score =  100 bits (249), Expect = 4e-18
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 10/312 (3%)
 Frame = -2

Query: 4508 MINLCLQCGCLEFARLVFERMLERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLI 4329
            MI+ C++CG +E A  +F +M +RD VSW  M+ GYAK G +D+AR +F  MP  ER++I
Sbjct: 259  MIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMP--ERDVI 316

Query: 4328 TWNCMISGYLQSKDGFEFAWDLFSSMPERDLVSWNA----MLDGCVKCGKLE----VARY 4173
            + N M++GY+Q+    E        +  ++L   NA     L    + G  +    +  Y
Sbjct: 317  SCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCY 376

Query: 4172 LFNQMPKKDAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSA 3993
            + +            +ID YAK   ID A  +F  +   ++ +  WNA+I G  ++G   
Sbjct: 377  IEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDI--DDKSIDHWNAIIGGLAIHGLGE 434

Query: 3992 EAINLFHEMMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLG--V 3819
             A  LF EM  +  + PD  TF+  L+A    G + EG +  + + ++   ++ KL    
Sbjct: 435  VAFELFMEMEKL-FVKPDDITFIGVLNACNHAGLVKEGLMCFE-LMRRVHKVEPKLQHYG 492

Query: 3818 ALIDMYSKCGSIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLSVKP 3639
             ++D+  + G +  A +                                   +E++ ++P
Sbjct: 493  CMVDILGRAGHVEEAKKF----------------------------------VEKMPIEP 518

Query: 3638 DDITFIGVLSAC 3603
            +D+ +  +LSAC
Sbjct: 519  NDVVWRTLLSAC 530



 Score = 85.1 bits (209), Expect = 2e-13
 Identities = 90/388 (23%), Positives = 171/388 (44%), Gaps = 20/388 (5%)
 Frame = -2

Query: 4478 LEFARLVF-------ERMLERDCVSWNLMIKGYAK-------YGMVDLARDVFYRMPKEE 4341
            +EFAR +F       +   + +   WN +IK ++        + + +L  +    + K  
Sbjct: 65   VEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFS 124

Query: 4340 RNLITWNCMISGYLQSKDGFEFAWDLFSSMPERDLVSWNAMLDGCVKCGKLEVARYLFNQ 4161
             +L+   C   G +  K+G +    L       D+   N ++   ++CG L +AR LF++
Sbjct: 125  FSLVLKACSRLGLI--KEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDR 182

Query: 4160 MPKKDAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAI- 3984
            M K+D+V++ +MIDGY K   +  A+ LF+ M   ++++I+WN++I+GY    RS E + 
Sbjct: 183  MMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGY---ARSEEGLR 239

Query: 3983 ---NLFHEMMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVAL 3813
                LF EM        D  ++   +    + G +     +   + K+    D      +
Sbjct: 240  VAWELFEEMP-----KRDLISWNSMIDGCVKCGKMENAHHLFNQMPKR----DVVSWANM 290

Query: 3812 IDMYSKCGSIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEM-ERLSVKPD 3636
            +D Y+K G I  A  LF  +  + V   N              A++ F +M  R  + PD
Sbjct: 291  VDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPD 350

Query: 3635 DITFIGVLSACDHSGMVEEG-CMFFELMRRAHCMKPKLQHYGCMVDILSRAGYLEDAMKL 3459
            + T +  LSA    G  +EG  +   +      +  KL     ++D+ ++ G +++A+ +
Sbjct: 351  NATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLG--VALIDMYAKCGSIDNALSV 408

Query: 3458 IASMPIEPNDVVWRALLSACKNHDNYEI 3375
               +  +  D  W A++     H   E+
Sbjct: 409  FEDIDDKSID-HWNAIIGGLAIHGLGEV 435


>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
            predicted protein [Populus trichocarpa]
          Length = 643

 Score =  559 bits (1440), Expect = e-156
 Identities = 266/463 (57%), Positives = 350/463 (75%)
 Frame = -2

Query: 4508 MINLCLQCGCLEFARLVFERMLERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLI 4329
            +I+  ++CGCL  A  VF+RM +RD VS+N MI GY K G +DLAR VF  +P EERNLI
Sbjct: 168  LISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLI 227

Query: 4328 TWNCMISGYLQSKDGFEFAWDLFSSMPERDLVSWNAMLDGCVKCGKLEVARYLFNQMPKK 4149
            +WN +I GY QS+DG   AW LF+ MPERDL+SWN+M+DGCVKCG++E A+ LF++MP +
Sbjct: 228  SWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNR 287

Query: 4148 DAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAINLFHE 3969
            D V+WA MIDGYAK  R+DIA+ LF++M   ERDV+ +NA++ GYV NG   EA+ +F+ 
Sbjct: 288  DIVSWANMIDGYAKNGRVDIARSLFDEM--PERDVVAYNAMMGGYVQNGYCMEALGIFYG 345

Query: 3968 MMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVALIDMYSKCG 3789
            M    +   D  T +IALSAIA+LGHI +G  IH++IE+ GF LDG+LGVALIDMYSKCG
Sbjct: 346  MQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCG 405

Query: 3788 SIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLSVKPDDITFIGVLS 3609
            SI  A+ +F+N+  KSVDHWN           GE+A D  MEMER+ V+PDDITFIG+L+
Sbjct: 406  SIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLN 465

Query: 3608 ACDHSGMVEEGCMFFELMRRAHCMKPKLQHYGCMVDILSRAGYLEDAMKLIASMPIEPND 3429
            AC H+G+V+EG M FELMRR H ++PKLQHYGCMVDIL RAG++E+A   +  MP EPND
Sbjct: 466  ACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPND 525

Query: 3428 VVWRALLSACKNHDNYEIGLAAAKHLMQLDYCNTSSYVLLSNLYAAYGMWSEVSRVRSMM 3249
            V+WR+LLSACK H+++ +G   A++LM+LD  + SSYVL SN+YA  G W++V +VR+MM
Sbjct: 526  VIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMM 585

Query: 3248 KERDILKVPGCSWIELEGTLHEFVVGDKSHPQSQEIYSVLEKL 3120
            K++++ K+PGCSWIELEG ++ F V DKSHPQ   IYS+L+ L
Sbjct: 586  KQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILDSL 628



 Score = 92.8 bits (229), Expect = 8e-16
 Identities = 99/405 (24%), Positives = 177/405 (43%), Gaps = 20/405 (4%)
 Frame = -2

Query: 4493 LQCGCLEFARLVF-----------ERMLERDCVSWNLMIKGYAK-------YGMVDLARD 4368
            L    +EFAR +F           E   E+D   WN +IK Y+          +V L  +
Sbjct: 61   LHAPLIEFARFIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLE 120

Query: 4367 VFYRMPKEERNLITWNCMISGYLQSKDGFEFAWDLFSSMPERDLVSWNAMLDGCVKCGKL 4188
                  K   +L+   C   G +  K+G +    L       DL   N ++   VKCG L
Sbjct: 121  NGAFADKFTLSLVLKACSRVGLV--KEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCL 178

Query: 4187 EVARYLFNQMPKKDAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVL 4008
              A  +F++MPK+D+V++ +MIDGY K  RID+A+ +F+ +   ER++I+WN+LI GY  
Sbjct: 179  VRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGY-- 236

Query: 4007 NGRSAEAINLFHEMMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGK 3828
              +S + I L    +       D  ++   +    + G + + + +   +  +    D  
Sbjct: 237  -AQSEDGI-LVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNR----DIV 290

Query: 3827 LGVALIDMYSKCGSIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMER-L 3651
                +ID Y+K G +  A  LF  +  + V  +N              A+ +F  M+   
Sbjct: 291  SWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDG 350

Query: 3650 SVKPDDITFIGVLSACDHSGMVEEGCMFFELMRR-AHCMKPKLQHYGCMVDILSRAGYLE 3474
            +   D+ T +  LSA    G +++G      +      +  +L     ++D+ S+ G +E
Sbjct: 351  NFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLG--VALIDMYSKCGSIE 408

Query: 3473 DAMKLIASMPIEPNDVVWRALLSACKNHDNYEIGLAAAKHLMQLD 3339
            +AM +  ++  +  D  W A++     H    +G  A   LM+++
Sbjct: 409  NAMMVFENIKEKSVD-HWNAIIGGLAIHG---LGELAFDFLMEME 449


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  556 bits (1433), Expect = e-155
 Identities = 271/462 (58%), Positives = 342/462 (74%)
 Frame = -2

Query: 4499 LCLQCGCLEFARLVFERMLERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLITWN 4320
            L L+CGCL  AR +F+RM+ RD VS+N MI GY K+GMV  AR++F  MP E++NLI+WN
Sbjct: 222  LYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWN 281

Query: 4319 CMISGYLQSKDGFEFAWDLFSSMPERDLVSWNAMLDGCVKCGKLEVARYLFNQMPKKDAV 4140
             MISGY +S++G   AW+LF  MP+RDL+SWN+M+DGCVKCGK+E A +LFN MPK+D V
Sbjct: 282  SMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVV 341

Query: 4139 TWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAINLFHEMML 3960
            +WA M+DGYAK+  IDIA+ LF++M   ERDVI+ NA++AGYV NG   EA+  FH+M+ 
Sbjct: 342  SWANMVDGYAKLGEIDIARGLFDEM--PERDVISCNAMMAGYVQNGXLMEALXFFHDMLS 399

Query: 3959 VSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVALIDMYSKCGSIR 3780
               L P   T +I LSAIA+LGH  EG  +H YIE  GF L  KLG ALIDMY+KCGSI 
Sbjct: 400  XKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXALIDMYAKCGSID 459

Query: 3779 TALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLSVKPDDITFIGVLSACD 3600
             AL          +DHWN           GE+A +LFMEME+L VKP+DITFIGVL+AC+
Sbjct: 460  NAL----------IDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNACN 509

Query: 3599 HSGMVEEGCMFFELMRRAHCMKPKLQHYGCMVDILSRAGYLEDAMKLIASMPIEPNDVVW 3420
            H+G+V+EG M F LMR  H ++PKLQHYGCMVDIL RAG++E+  K +  MPIEPNDVVW
Sbjct: 510  HAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKMPIEPNDVVW 569

Query: 3419 RALLSACKNHDNYEIGLAAAKHLMQLDYCNTSSYVLLSNLYAAYGMWSEVSRVRSMMKER 3240
            R LLSAC+NH+N+ IG   AKHL+ +D  N SSYVLLSN+YA +GMW++V R+R MMK+R
Sbjct: 570  RTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAXFGMWNDVYRIRMMMKQR 629

Query: 3239 DILKVPGCSWIELEGTLHEFVVGDKSHPQSQEIYSVLEKLFT 3114
            D+ K+PGCS IELEG +HEF V DKSHPQ   I ++  +L T
Sbjct: 630  DLKKIPGCSQIELEGNVHEFFVRDKSHPQRLPIVNISAELGT 671



 Score = 92.4 bits (228), Expect = 1e-15
 Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
 Frame = -2

Query: 4508 MINLCLQCGCLEFARLVFERMLERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLI 4329
            MI+ C++CG +E A  +F  M +RD VSW  M+ GYAK G +D+AR +F  MP  ER++I
Sbjct: 315  MIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMP--ERDVI 372

Query: 4328 TWNCMISGYLQSKDGFEFAWDLFSSMPERDLVSWNA----MLDGCVKCGKLE--VARYLF 4167
            + N M++GY+Q+    E        +  ++L   NA     L    + G  +  VA + +
Sbjct: 373  SCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCY 432

Query: 4166 ---NQMPKKDAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRS 3996
               N     + +  A +ID YAK   ID A             +  WNA++ G  ++G  
Sbjct: 433  IEDNGFSLSEKLGXA-LIDMYAKCGSIDNAL------------IDHWNAIJXGLAIHGLG 479

Query: 3995 AEAINLFHEMMLVSSLAPDQTTFVIALSAIAELGHIGEG 3879
              A  LF EM  +  + P+  TF+  L+A    G + EG
Sbjct: 480  EVAFELFMEMEKL-FVKPBDITFIGVLNACNHAGLVKEG 517



 Score = 81.3 bits (199), Expect = 2e-12
 Identities = 99/407 (24%), Positives = 168/407 (41%), Gaps = 74/407 (18%)
 Frame = -2

Query: 4388 MVDLARDVFY-----RMPKEERNLITWNCMISGYLQSKDGFEFAWDLFSSMPER----DL 4236
            +V+ AR +F      R  +++ N   WN +I  +   +D  E A+ +F+ M E     D 
Sbjct: 120  LVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXE-AFXIFNLMLENGVCVDK 178

Query: 4235 VSWNAMLDGC-----------------------------------VKCGKLEVARYLFNQ 4161
             S++ +L  C                                   ++CG L +AR LF++
Sbjct: 179  FSFSLVLKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDR 238

Query: 4160 MPKKDAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAI- 3984
            M  +D+V++ +MIDGY K   +  A+ LF+ M   ++++I+WN++I+GY    RS E + 
Sbjct: 239  MMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGY---ARSEEGLR 295

Query: 3983 ---NLFHEMMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVAL 3813
                LF EM        D  ++   +    + G +     +   + K+    D      +
Sbjct: 296  VAWELFEEMP-----KRDLISWNSMIDGCVKCGKMENAHHLFNXMPKR----DVVSWANM 346

Query: 3812 IDMYSKCGSIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLSVK--- 3642
            +D Y+K G I  A  LF  +  + V   N              A+  F +M  LS K   
Sbjct: 347  VDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHDM--LSXKELF 404

Query: 3641 PDDITFIGVLSACDHSGMVEEGCMF--------FELMRR---------AHC---MKPKLQ 3522
            P + T +  LSA    G  +EG           F L  +         A C       + 
Sbjct: 405  PXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXALIDMYAKCGSIDNALID 464

Query: 3521 HYGCMVDILSRAGYLEDAMKLIASMP---IEPNDVVWRALLSACKNH 3390
            H+  ++  L+  G  E A +L   M    ++P+D+ +  +L+AC NH
Sbjct: 465  HWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNAC-NH 510


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
            gi|449480068|ref|XP_004155790.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  550 bits (1416), Expect = e-153
 Identities = 257/461 (55%), Positives = 344/461 (74%)
 Frame = -2

Query: 4508 MINLCLQCGCLEFARLVFERMLERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLI 4329
            +I + L+CG +EFAR VF+RM  +D VS+N MI GY K G +DLAR++F  MP E++NLI
Sbjct: 166  LIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLI 225

Query: 4328 TWNCMISGYLQSKDGFEFAWDLFSSMPERDLVSWNAMLDGCVKCGKLEVARYLFNQMPKK 4149
            +WN M+ G+ Q+KDG   A +LF  MPERDLVSWN ++ G  KCG++E A  LFN+MPK+
Sbjct: 226  SWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKR 285

Query: 4148 DAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAINLFHE 3969
            D ++W+ MIDGYAK+  I +A+ LF++M   ++DV+ +N ++AGY  NG   EA+ +FHE
Sbjct: 286  DVISWSNMIDGYAKLGDIKVARTLFDEM--PDKDVVAFNTIMAGYAQNGYYTEALEIFHE 343

Query: 3968 MMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVALIDMYSKCG 3789
            M   S+L+PD+TT V+ALSAI++LGH+ +   +H Y  + G  + GK+ VALIDMYSKCG
Sbjct: 344  MQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCG 403

Query: 3788 SIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLSVKPDDITFIGVLS 3609
            SI  A+ +F  +  K +DHWN           G++A  + +EM RLSVKPD ITFIGVL+
Sbjct: 404  SIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLN 463

Query: 3608 ACDHSGMVEEGCMFFELMRRAHCMKPKLQHYGCMVDILSRAGYLEDAMKLIASMPIEPND 3429
            AC H+G+V+EG + FELMR+ H ++PKLQHYGCMVDIL +AG +E A+K I  MPIEPND
Sbjct: 464  ACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPND 523

Query: 3428 VVWRALLSACKNHDNYEIGLAAAKHLMQLDYCNTSSYVLLSNLYAAYGMWSEVSRVRSMM 3249
            ++WR LLSAC+NH+N+ IG   AKHLM +D CN+SSYVLLSN+YA  G+WS  S+VR MM
Sbjct: 524  IIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMM 583

Query: 3248 KERDILKVPGCSWIELEGTLHEFVVGDKSHPQSQEIYSVLE 3126
            K++++ KVPGCSWIELEG +HEF+V DKSHP   EIYSVL+
Sbjct: 584  KKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVLD 624


>gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
          Length = 584

 Score =  521 bits (1341), Expect = e-145
 Identities = 253/445 (56%), Positives = 331/445 (74%)
 Frame = -2

Query: 4508 MINLCLQCGCLEFARLVFERMLERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLI 4329
            +I L L+CGCL FAR VF+RM +RD VS+N MI GY K G+++ AR++F  MP+E++NLI
Sbjct: 134  LIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPREKKNLI 193

Query: 4328 TWNCMISGYLQSKDGFEFAWDLFSSMPERDLVSWNAMLDGCVKCGKLEVARYLFNQMPKK 4149
            +WNCMISGY QS+DG   A  LF  MPE+DL+SWN+++DG VK  ++E A+ LF+ MP+K
Sbjct: 194  SWNCMISGYTQSEDGVNVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLFDLMPRK 253

Query: 4148 DAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAINLFHE 3969
            D VTWATMIDGYAK+  +  A+ LF++M   +RDV+ +N+++AGYV N   AEAI +F++
Sbjct: 254  DVVTWATMIDGYAKLGFVHQAKKLFDEM--PQRDVVAYNSMMAGYVQNKYHAEAIGIFND 311

Query: 3968 MMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVALIDMYSKCG 3789
            M   S L+PD+TT VI LSAIA+LG + +   IH YI    F L GKLGVALID YSKCG
Sbjct: 312  MEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCG 371

Query: 3788 SIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLSVKPDDITFIGVLS 3609
            SI+ ++++F+ +  KS+DHWN           GE A D+ +++E+ S+KPDDITFIGVL+
Sbjct: 372  SIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLN 431

Query: 3608 ACDHSGMVEEGCMFFELMRRAHCMKPKLQHYGCMVDILSRAGYLEDAMKLIASMPIEPND 3429
            AC HSG+V+EG + FELMRR H ++PKLQHYGCMVDILSR+G +E A  LI  MPIEPND
Sbjct: 432  ACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPND 491

Query: 3428 VVWRALLSACKNHDNYEIGLAAAKHLMQLDYCNTSSYVLLSNLYAAYGMWSEVSRVRSMM 3249
            V+WR  L+AC NH  +E G   AKHL      N SS+VLLSN+YA++GMW EV RVR+ M
Sbjct: 492  VIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTM 551

Query: 3248 KERDILKVPGCSWIELEGTLHEFVV 3174
            KER + K+PGCSWIEL+G +HEF V
Sbjct: 552  KERKLRKIPGCSWIELDGNVHEFFV 576



 Score =  101 bits (252), Expect = 2e-18
 Identities = 98/396 (24%), Positives = 184/396 (46%), Gaps = 17/396 (4%)
 Frame = -2

Query: 4475 EFARLVFERM------LERDCVSWNLMIKGYAKYGMVDLARDVFYRMPKEERNLITWNCM 4314
            EFAR +F         +E D   WN +IK ++       A  +F  M +   ++  ++  
Sbjct: 38   EFARCIFHEYHVSSYSVEEDPFLWNAVIKSFSHGVDPRNALLLFCLMIENSVSVDKFSIS 97

Query: 4313 ISGYLQSKDGF-EFAWDLFSSMPER----DLVSWNAMLDGCVKCGKLEVARYLFNQMPKK 4149
            +     S+ GF +F   +   + +     DL   N ++   +KCG L  AR +F++MP++
Sbjct: 98   LVLKACSRLGFVDFGMQVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQR 157

Query: 4148 DAVTWATMIDGYAKMSRIDIAQCLFNKMRETERDVITWNALIAGYVLNGRSAEAIN---- 3981
            D+V++ +MIDGY K   I+ A+ LF+ M   ++++I+WN +I+GY    +S + +N    
Sbjct: 158  DSVSYNSMIDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYT---QSEDGVNVASK 214

Query: 3980 LFHEMMLVSSLAPDQTTFVIALSAIAELGHIGEGKLIHKYIEKKGFLLDGKLGVALIDMY 3801
            LF EM        D  ++   +    +   I + K +   + +K    D      +ID Y
Sbjct: 215  LFDEMP-----EKDLISWNSLIDGYVKHRRIEDAKSLFDLMPRK----DVVTWATMIDGY 265

Query: 3800 SKCGSIRTALQLFKNLTGKSVDHWNXXXXXXXXXXXGEMAVDLFMEMERLS-VKPDDITF 3624
            +K G +  A +LF  +  + V  +N              A+ +F +ME+ S + PD+ T 
Sbjct: 266  AKLGFVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTL 325

Query: 3623 IGVLSACDHSGMVEEGC-MFFELMRRAHCMKPKLQHYGCMVDILSRAGYLEDAMKLIASM 3447
            + VLSA    G + +   +   +M     +  KL     ++D  S+ G ++ +M++   +
Sbjct: 326  VIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLG--VALIDTYSKCGSIQKSMRVFEEI 383

Query: 3446 PIEPNDVVWRALLSACKNHDNYEIGLAAAKHLMQLD 3339
              +  D  W A++     H    +G +A   L+Q++
Sbjct: 384  ENKSID-HWNAMIGGLAIHG---LGESAFDMLLQIE 415