BLASTX nr result

ID: Coptis24_contig00006980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006980
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050672.2| Os03g0619400 [Oryza sativa Japonica Group] g...    76   2e-11
ref|XP_001769617.1| predicted protein [Physcomitrella patens sub...    76   2e-11
ref|XP_001781635.1| predicted protein [Physcomitrella patens sub...    76   2e-11
ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-...    75   4e-11
ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-...    75   4e-11

>ref|NP_001050672.2| Os03g0619400 [Oryza sativa Japonica Group]
           gi|255674709|dbj|BAF12586.2| Os03g0619400, partial
           [Oryza sativa Japonica Group]
          Length = 74

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 40/44 (90%), Positives = 40/44 (90%)
 Frame = +2

Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496
           LLDISKVQDD VGDGTTSVV LAGELLREAEKLV MKIHPM II
Sbjct: 5   LLDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTII 48


>ref|XP_001769617.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679159|gb|EDQ65610.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 528

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +2

Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496
           L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA+KIHPM II
Sbjct: 80  LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVALKIHPMTII 123


>ref|XP_001781635.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162666949|gb|EDQ53591.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 528

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +2

Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496
           L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA+KIHPM II
Sbjct: 80  LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVALKIHPMTII 123


>ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
          Length = 534

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 39/44 (88%), Positives = 40/44 (90%)
 Frame = +2

Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496
           L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA KIHPM II
Sbjct: 79  LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTII 122


>ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
          Length = 527

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 39/44 (88%), Positives = 40/44 (90%)
 Frame = +2

Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496
           L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA KIHPM II
Sbjct: 79  LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTII 122


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