BLASTX nr result
ID: Coptis24_contig00006980
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006980 (1223 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001050672.2| Os03g0619400 [Oryza sativa Japonica Group] g... 76 2e-11 ref|XP_001769617.1| predicted protein [Physcomitrella patens sub... 76 2e-11 ref|XP_001781635.1| predicted protein [Physcomitrella patens sub... 76 2e-11 ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-... 75 4e-11 ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-... 75 4e-11 >ref|NP_001050672.2| Os03g0619400 [Oryza sativa Japonica Group] gi|255674709|dbj|BAF12586.2| Os03g0619400, partial [Oryza sativa Japonica Group] Length = 74 Score = 75.9 bits (185), Expect = 2e-11 Identities = 40/44 (90%), Positives = 40/44 (90%) Frame = +2 Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496 LLDISKVQDD VGDGTTSVV LAGELLREAEKLV MKIHPM II Sbjct: 5 LLDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTII 48 >ref|XP_001769617.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679159|gb|EDQ65610.1| predicted protein [Physcomitrella patens subsp. patens] Length = 528 Score = 75.9 bits (185), Expect = 2e-11 Identities = 39/44 (88%), Positives = 41/44 (93%) Frame = +2 Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496 L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA+KIHPM II Sbjct: 80 LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVALKIHPMTII 123 >ref|XP_001781635.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666949|gb|EDQ53591.1| predicted protein [Physcomitrella patens subsp. patens] Length = 528 Score = 75.9 bits (185), Expect = 2e-11 Identities = 39/44 (88%), Positives = 41/44 (93%) Frame = +2 Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496 L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA+KIHPM II Sbjct: 80 LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVALKIHPMTII 123 >ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus] Length = 534 Score = 74.7 bits (182), Expect = 4e-11 Identities = 39/44 (88%), Positives = 40/44 (90%) Frame = +2 Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496 L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA KIHPM II Sbjct: 79 LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTII 122 >ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus] Length = 527 Score = 74.7 bits (182), Expect = 4e-11 Identities = 39/44 (88%), Positives = 40/44 (90%) Frame = +2 Query: 365 LLDISKVQDD*VGDGTTSVVFLAGELLREAEKLVAMKIHPMKII 496 L+DISKVQDD VGDGTTSVV LAGELLREAEKLVA KIHPM II Sbjct: 79 LVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTII 122