BLASTX nr result

ID: Coptis24_contig00006979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006979
         (1502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]         468   e-129
ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing pr...   460   e-127
emb|CAN71340.1| hypothetical protein VITISV_043793 [Vitis vinifera]   458   e-126
ref|XP_002518243.1| leucine-rich repeat-containing protein, puta...   456   e-126
ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin ...   453   e-125

>dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]
          Length = 350

 Score =  468 bits (1203), Expect = e-129
 Identities = 242/352 (68%), Positives = 294/352 (83%), Gaps = 4/352 (1%)
 Frame = +2

Query: 131  MMYEEPQELIRMEPKKKDRKRRSL--GDHDQKLEEIDLSGLSLDSLPCSSLNLTLISKLD 304
            MMYE+ +  I+  P KK    RS   G  ++KLE +DLSG+SL+SLP  SLNL +I KLD
Sbjct: 1    MMYEQQRFQIQQPPVKKKSTERSCRSGIEEEKLEIVDLSGMSLESLPNPSLNLAIICKLD 60

Query: 305  LSSNNLENIPESLMARLLNVVVLDIHSNQLKTLPNSVGCLSKLKVLNISGNLLESLPKAI 484
            LS+NNL+NIPESL ARLLN+VVLD+HSNQL++LPNSVGCLSKLKVLN+SGNL+E LPK+I
Sbjct: 61   LSNNNLQNIPESLTARLLNMVVLDVHSNQLRSLPNSVGCLSKLKVLNVSGNLIEYLPKSI 120

Query: 485  ENCRCLEELNANFNKLKKLPDTIGFELVNLRKLSVNSNKLDFLPYSTSHLTNLRVLDARL 664
            ENCR LEELNANFNKL +LPDT+GFEL+NL+KLSVNSNKL FLP STSHLT+L++LDARL
Sbjct: 121  ENCRALEELNANFNKLSQLPDTMGFELLNLKKLSVNSNKLVFLPRSTSHLTSLKILDARL 180

Query: 665  NCLRSLPEEGLENMINLEILNISQNFQYLSTLPDSIGLLLSLIELDVSYNKIKILPNSIG 844
            NCLRSLP++ LEN+INLE LN+SQNFQYL TLP SIGLLLSL+ELDVSYN++K LP+SIG
Sbjct: 181  NCLRSLPDD-LENLINLETLNVSQNFQYLDTLPYSIGLLLSLVELDVSYNRVKSLPDSIG 239

Query: 845  CLMKLEKLSAEGNPLVSPRMDTVEQGIAAVQEYLIEQMNGTHKSP-RKRSWLGKFVKCGT 1021
            CL KL+KLS EGNPLVSP  + VEQG+ AV+EYL  +MN  H+SP +K+SW+GK VK GT
Sbjct: 240  CLKKLQKLSVEGNPLVSPPPEVVEQGLHAVKEYLCNKMNSAHQSPTKKKSWVGKLVKYGT 299

Query: 1022 FSGRIGTDRRHRMEKDGHIMP-EYRSIDGLATPRYMGMFSPLRIFSPKSHLA 1174
            F+G   +  R   E++  I+  EYRSIDGLA+PRYMGMFSP R+FSP+S+ +
Sbjct: 300  FNGHARSGPRE--EREAFIVDHEYRSIDGLASPRYMGMFSPRRLFSPRSYFS 349


>ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Vitis
            vinifera]
          Length = 351

 Score =  460 bits (1184), Expect = e-127
 Identities = 230/354 (64%), Positives = 295/354 (83%), Gaps = 6/354 (1%)
 Frame = +2

Query: 131  MMYEEPQELIRMEPKKKDRKRRSLGDHDQKLEE-----IDLSGLSLDSLPCSSLNLTLIS 295
            MMYE+ Q+++RM+ +K++R+R    + ++ +EE     +DLSG+SLD+LP  SLNL  I 
Sbjct: 1    MMYEQQQQVMRMDLRKREREREREREKERSIEEERLEIVDLSGMSLDALPNPSLNLAAIC 60

Query: 296  KLDLSSNNLENIPESLMARLLNVVVLDIHSNQLKTLPNSVGCLSKLKVLNISGNLLESLP 475
            KLDL +NNL+NIPESL ARLLNVV+LD+HSNQLK+LPNS+GCLSKLKVLNISGNL+++LP
Sbjct: 61   KLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLP 120

Query: 476  KAIENCRCLEELNANFNKLKKLPDTIGFELVNLRKLSVNSNKLDFLPYSTSHLTNLRVLD 655
            K IENCR LEELNANFN+L  LPDTIGFEL+N++KLSVNSNKL  LP STSHLT+L+VLD
Sbjct: 121  KTIENCRSLEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLD 180

Query: 656  ARLNCLRSLPEEGLENMINLEILNISQNFQYLSTLPDSIGLLLSLIELDVSYNKIKILPN 835
            ARLNCLR+LPE+ LEN+INL++LN+SQNFQYL TLP SIGLL+SL+ELD SYN+I  LP+
Sbjct: 181  ARLNCLRALPED-LENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELDASYNRITTLPD 239

Query: 836  SIGCLMKLEKLSAEGNPLVSPRMDTVEQGIAAVQEYLIEQMNGTHK-SPRKRSWLGKFVK 1012
            S+GCL KL+KL  EGNPLVSP M+ VEQG+ AV+EYL E+M   H+ SP+K+SW+GK V+
Sbjct: 240  SMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEYLSEKMTAAHRCSPKKKSWIGKLVR 299

Query: 1013 CGTFSGRIGTDRRHRMEKDGHIMPEYRSIDGLATPRYMGMFSPLRIFSPKSHLA 1174
             GTF+   GT+   R E++G +  +YRSI+GLATPR +GMFSP R+FSP+++ +
Sbjct: 300  YGTFN---GTNNASREEREGFLRSDYRSIEGLATPRSVGMFSPRRLFSPRNYFS 350


>emb|CAN71340.1| hypothetical protein VITISV_043793 [Vitis vinifera]
          Length = 355

 Score =  458 bits (1179), Expect = e-126
 Identities = 230/358 (64%), Positives = 295/358 (82%), Gaps = 10/358 (2%)
 Frame = +2

Query: 131  MMYEEPQELIRMEPKKKDRKR---------RSLGDHDQKLEEIDLSGLSLDSLPCSSLNL 283
            MMYE+ Q+++RM+ +K++R+R         +     +++LE +DLSG+SLD+LP  SLNL
Sbjct: 1    MMYEQQQQVMRMDLRKREREREREKEREREKERSIEEERLEIVDLSGMSLDALPNPSLNL 60

Query: 284  TLISKLDLSSNNLENIPESLMARLLNVVVLDIHSNQLKTLPNSVGCLSKLKVLNISGNLL 463
              I KLDL +NNL+NIPESL ARLLNVV+LD+HSNQLK+LPNS+GCLSKLKVLNISGNL+
Sbjct: 61   AAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLI 120

Query: 464  ESLPKAIENCRCLEELNANFNKLKKLPDTIGFELVNLRKLSVNSNKLDFLPYSTSHLTNL 643
            ++LPK IENCR LEELNANFN+L  LPDTIGFEL+N++KLSVNSNKL  LP STSHLT+L
Sbjct: 121  QNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSL 180

Query: 644  RVLDARLNCLRSLPEEGLENMINLEILNISQNFQYLSTLPDSIGLLLSLIELDVSYNKIK 823
            +VLDARLNCLR+LPE+ LEN+INL++LN+SQNFQYL TLP SIGLL+SL+ELD SYN+I 
Sbjct: 181  QVLDARLNCLRALPED-LENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELDASYNRIT 239

Query: 824  ILPNSIGCLMKLEKLSAEGNPLVSPRMDTVEQGIAAVQEYLIEQMNGTHK-SPRKRSWLG 1000
             LP+S+GCL KL+KL  EGNPLVSP M+ VEQG+ AV+EYL E+M   H+ SP+K+SW+G
Sbjct: 240  TLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEYLSEKMTAAHRCSPKKKSWIG 299

Query: 1001 KFVKCGTFSGRIGTDRRHRMEKDGHIMPEYRSIDGLATPRYMGMFSPLRIFSPKSHLA 1174
            K V+ GTF+   GT+   R E++G +  +YRSI+GLATPR +GMFSP R+FSP+++ +
Sbjct: 300  KLVRYGTFN---GTNNASREEREGFLRSDYRSIEGLATPRSVGMFSPRRLFSPRNYFS 354


>ref|XP_002518243.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223542590|gb|EEF44129.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  456 bits (1174), Expect = e-126
 Identities = 238/353 (67%), Positives = 288/353 (81%), Gaps = 8/353 (2%)
 Frame = +2

Query: 131  MMYEEPQE-----LIRMEPKKKDRKRRSLGDHDQKLEEIDLSGLSLDSLPCSSLNLTLIS 295
            M+YE+ Q+     ++R++  KK   R S+   +QKLE +DLSG+SLD+LP  SLNL  I 
Sbjct: 1    MLYEQQQQQQHQMMVRVDMGKKADNRESI--EEQKLEIVDLSGMSLDTLPSPSLNLATIC 58

Query: 296  KLDLSSNNLENIPESLMARLLNVVVLDIHSNQLKTLPNSVGCLSKLKVLNISGNLLESLP 475
            KLDLS+NNL++IPESL ARLLN+V+LD+HSNQLK+LPNS+GCLSKLKVLN++GNLL  LP
Sbjct: 59   KLDLSNNNLQSIPESLTARLLNIVILDVHSNQLKSLPNSIGCLSKLKVLNVAGNLLACLP 118

Query: 476  KAIENCRCLEELNANFNKLKKLPDTIGFELVNLRKLSVNSNKLDFLPYSTSHLTNLRVLD 655
            K IENCR LEELNANFNKL  LP+TIGFELVNL+KLSVNSNKL FLP+S +HLT+L+ LD
Sbjct: 119  KTIENCRSLEELNANFNKLSVLPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKTLD 178

Query: 656  ARLNCLRSLPEEGLENMINLEILNISQNFQYLSTLPDSIGLLLSLIELDVSYNKIKILPN 835
            ARLN LRSLPE+ LEN+INL++LN+SQNFQYL TLP SIGLL SLIELD+SYN+I  LPN
Sbjct: 179  ARLNNLRSLPED-LENLINLKVLNVSQNFQYLETLPYSIGLLFSLIELDISYNRITSLPN 237

Query: 836  SIGCLMKLEKLSAEGNPLVSPRMDTVEQGIAAVQEYLIEQMNGTHKSP-RKRSWLGKFVK 1012
            SIGCL KL+KLS EGNPLVSP M+ VEQG+  V+EYL E+MN  HKSP +K+SW+GK VK
Sbjct: 238  SIGCLRKLQKLSVEGNPLVSPPMEVVEQGLHTVKEYLSEKMNAGHKSPQKKKSWVGKLVK 297

Query: 1013 CGTFSG--RIGTDRRHRMEKDGHIMPEYRSIDGLATPRYMGMFSPLRIFSPKS 1165
             GTF+G  R   +  +  E+   IM EYRSIDGLA+P YMGMFSP R+FSPK+
Sbjct: 298  YGTFNGSTRNQINSTNNEERKAFIMSEYRSIDGLASPSYMGMFSPRRLFSPKN 350


>ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin homology
            domain-containing protein 1-like [Glycine max]
          Length = 360

 Score =  453 bits (1166), Expect = e-125
 Identities = 235/359 (65%), Positives = 287/359 (79%), Gaps = 13/359 (3%)
 Frame = +2

Query: 131  MMYEEPQELIRMEPKKKDRKRRSLG------DHDQKLEEIDLSGLSLDSLPCSSLNLTLI 292
            MMYE+ Q     +P   D +R+  G      + D++LE +DLSG+SLDSLP  SLNL  I
Sbjct: 1    MMYEQQQRFHHQQPMTMDTRRKKKGSSGGIEEADERLEIVDLSGMSLDSLPNPSLNLATI 60

Query: 293  SKLDLSSNNLENIPESLMARLLNVVVLDIHSNQLKTLPNSVGCLSKLKVLNISGNLLESL 472
             KLDLS+NNL NIPESL ARLLN+VVLD+HSNQL++LPNS+GCL KLKVLN+SGNL+E L
Sbjct: 61   CKLDLSNNNLLNIPESLTARLLNMVVLDVHSNQLRSLPNSIGCLYKLKVLNVSGNLIEYL 120

Query: 473  PKAIENCRCLEELNANFNKLKKLPDTIGFELVNLRKLSVNSNKLDFLPYSTSHLTNLRVL 652
            PK IENCR LEELNANFNKL +LPDTIG+EL NL+KLSVNSNKL FLP STSHLT LR+L
Sbjct: 121  PKTIENCRSLEELNANFNKLIQLPDTIGYELKNLKKLSVNSNKLVFLPRSTSHLTALRIL 180

Query: 653  DARLNCLRSLPEEGLENMINLEILNISQNFQYLSTLPDSIGLLLSLIELDVSYNKIKILP 832
            DARLNCLRSLPE+ LEN+INLE LN+SQNFQYL +LP S+G LLSL+ELDVSYNKI+ LP
Sbjct: 181  DARLNCLRSLPED-LENLINLETLNVSQNFQYLDSLPYSVGFLLSLVELDVSYNKIRALP 239

Query: 833  NSIGCLMKLEKLSAEGNPLVSPRMDTVEQGIAAVQEYLIEQMNGTHKSP-----RKRSWL 997
            +SIGCL KL+K+S EGNPL SP  + VEQG+ AV+EYL ++MN  H+SP     + +SW+
Sbjct: 240  DSIGCLKKLQKISVEGNPLSSPPPELVEQGLHAVKEYLCQKMNAGHQSPTTNNKKSKSWV 299

Query: 998  GKFVKCGTFSGRIGTDRR--HRMEKDGHIMPEYRSIDGLATPRYMGMFSPLRIFSPKSH 1168
            G+ V+ GTF+G IG  R    R E++  I+P+YR IDGLA+PRYMGMFSP R+FSP+++
Sbjct: 300  GRLVRYGTFNG-IGQSRAAGAREEREAFIVPDYRPIDGLASPRYMGMFSPRRLFSPRTY 357


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