BLASTX nr result

ID: Coptis24_contig00006977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006977
         (1394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326609.1| predicted protein [Populus trichocarpa] gi|2...   588   e-165
ref|XP_002276342.1| PREDICTED: autophagy-related protein 3 [Viti...   587   e-165
ref|XP_002510982.1| conserved hypothetical protein [Ricinus comm...   580   e-163
ref|XP_002303487.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
gb|ACJ84826.1| unknown [Medicago truncatula] gi|388518803|gb|AFK...   566   e-159

>ref|XP_002326609.1| predicted protein [Populus trichocarpa] gi|222833931|gb|EEE72408.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  588 bits (1516), Expect = e-165
 Identities = 285/314 (90%), Positives = 303/314 (96%), Gaps = 1/314 (0%)
 Frame = +1

Query: 148  MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 327
            MVL+QKIHEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLVSKCPTWSWESGEPS
Sbjct: 1    MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS 60

Query: 328  KRKSYLPAEKQYLITRNVPCLRRAASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 507
            KRKSYLPAEKQ+LITRNVPCLRRAAS+EEEYEAAGGEVL+DNE+NDGWLATHGKPKETK 
Sbjct: 61   KRKSYLPAEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKG 120

Query: 508  DEEENLPSMETLEISKSKT-IQSMPSYFGGEEEEDIPDMLGYEEPDNLIETDEATFQSTY 684
            DE+EN+PSME LEIS  K+ IQ+  SYFGGEEEEDIPDM  +E+PDNLIE+D AT Q+TY
Sbjct: 121  DEDENVPSMEALEISAKKSLIQTNHSYFGGEEEEDIPDMADFEDPDNLIESDPATLQTTY 180

Query: 685  LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK 864
            LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK
Sbjct: 181  LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK 240

Query: 865  TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTI 1044
            TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKF+ASVIPTI
Sbjct: 241  TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTI 300

Query: 1045 EYDYTMDFDLGSSS 1086
            EYDYTMDFDLGSSS
Sbjct: 301  EYDYTMDFDLGSSS 314


>ref|XP_002276342.1| PREDICTED: autophagy-related protein 3 [Vitis vinifera]
            gi|297734579|emb|CBI16630.3| unnamed protein product
            [Vitis vinifera]
          Length = 314

 Score =  587 bits (1512), Expect = e-165
 Identities = 281/313 (89%), Positives = 297/313 (94%)
 Frame = +1

Query: 148  MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 327
            MVL+QK+HEAFKGTVERITGPRTVSAFKEKGVLS+ EF+IAGDNLVSKCPTWSWESGEP 
Sbjct: 1    MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVTEFVIAGDNLVSKCPTWSWESGEPG 60

Query: 328  KRKSYLPAEKQYLITRNVPCLRRAASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 507
            KRKSYLP EKQYLITRNVPCLRRAAS+EEEYEAAGGEVL+DNE+NDGWLATHGKPKETK 
Sbjct: 61   KRKSYLPPEKQYLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKG 120

Query: 508  DEEENLPSMETLEISKSKTIQSMPSYFGGEEEEDIPDMLGYEEPDNLIETDEATFQSTYL 687
            D EENLPSMETL+ISK KTI+S+P+YFGGEEEEDIPDM  YEE DN++E D AT Q  YL
Sbjct: 121  DAEENLPSMETLDISKDKTIKSIPTYFGGEEEEDIPDMADYEETDNVVEADAATLQMPYL 180

Query: 688  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 867
            VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE+RM LQPELVLEDVSQDHA KT
Sbjct: 181  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEARMPLQPELVLEDVSQDHAHKT 240

Query: 868  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTIE 1047
            VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKF+ASVIPTIE
Sbjct: 241  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTIE 300

Query: 1048 YDYTMDFDLGSSS 1086
            YDYTMDFDLGSSS
Sbjct: 301  YDYTMDFDLGSSS 313


>ref|XP_002510982.1| conserved hypothetical protein [Ricinus communis]
            gi|223550097|gb|EEF51584.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 314

 Score =  580 bits (1496), Expect = e-163
 Identities = 277/314 (88%), Positives = 300/314 (95%)
 Frame = +1

Query: 148  MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 327
            MVL+QK+HEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLV+KCPTWSWESGEPS
Sbjct: 1    MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWSWESGEPS 60

Query: 328  KRKSYLPAEKQYLITRNVPCLRRAASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 507
            KR SYLP EKQ+LITRNVPCLRRAAS+EEEYEAAGGEVL+DNE+NDGWLATHGKPKE+  
Sbjct: 61   KRMSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKESTG 120

Query: 508  DEEENLPSMETLEISKSKTIQSMPSYFGGEEEEDIPDMLGYEEPDNLIETDEATFQSTYL 687
            DE+EN+PS+E LEISK   I S+PSYFGG+EEEDIPDM  YE+P+NLIE+D AT QSTYL
Sbjct: 121  DEDENVPSLEALEISKKSPIHSIPSYFGGKEEEDIPDMDDYEDPNNLIESDPATLQSTYL 180

Query: 688  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 867
            +AHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181  IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 868  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTIE 1047
            VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEV KYLFLFLKF+ASVIPTIE
Sbjct: 241  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 1048 YDYTMDFDLGSSSH 1089
            YDYTMDFDLGSSS+
Sbjct: 301  YDYTMDFDLGSSSN 314


>ref|XP_002303487.1| predicted protein [Populus trichocarpa] gi|222840919|gb|EEE78466.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  573 bits (1477), Expect = e-161
 Identities = 281/315 (89%), Positives = 301/315 (95%), Gaps = 2/315 (0%)
 Frame = +1

Query: 148  MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 327
            MVL+QKIHEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLVSKCPTWSWESGEPS
Sbjct: 1    MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS 60

Query: 328  KRKSYLPAEKQYLITRNVPCLRRAASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 507
            KRK YLPAEKQ+LITRNVPCLRRAAS+EE+YEAAGGEVL+DNE+NDGWLATHGKPKETK 
Sbjct: 61   KRKPYLPAEKQFLITRNVPCLRRAASVEEDYEAAGGEVLLDNEDNDGWLATHGKPKETKG 120

Query: 508  DEEENLPSMETLEIS-KSKTIQSMPSYFGGEEEEDIPDMLGYEEPDNLIETDEATFQSTY 684
            DE+EN+PSME L+IS K   IQ+ PSYFGG EEEDIPDM  +E+PDNLIE+D AT Q+TY
Sbjct: 121  DEDENVPSMEALDISVKRIPIQTNPSYFGG-EEEDIPDMADFEDPDNLIESDPATLQTTY 179

Query: 685  LVAHEP-DDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 861
            LVAHEP DDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLL+PELVLEDVSQDHAR
Sbjct: 180  LVAHEPDDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLEPELVLEDVSQDHAR 239

Query: 862  KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPT 1041
            KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKF+ASVIPT
Sbjct: 240  KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 299

Query: 1042 IEYDYTMDFDLGSSS 1086
            IEYDYTMDFDLGSSS
Sbjct: 300  IEYDYTMDFDLGSSS 314


>gb|ACJ84826.1| unknown [Medicago truncatula] gi|388518803|gb|AFK47463.1| unknown
            [Medicago truncatula]
          Length = 310

 Score =  567 bits (1460), Expect = e-159
 Identities = 274/314 (87%), Positives = 298/314 (94%)
 Frame = +1

Query: 148  MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 327
            MVL+QK+HEAFKGTVERITG RTVSAFKEKGVLS++EFIIAGDNLV+KCPTWSWESGEPS
Sbjct: 1    MVLSQKLHEAFKGTVERITGHRTVSAFKEKGVLSVSEFIIAGDNLVAKCPTWSWESGEPS 60

Query: 328  KRKSYLPAEKQYLITRNVPCLRRAASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 507
            KRKSYLP+EKQ+LITRNVPCLRRAASIEEEYEAAGGEVL+D+EENDGWLATHGKPKETK 
Sbjct: 61   KRKSYLPSEKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDDEENDGWLATHGKPKETKS 120

Query: 508  DEEENLPSMETLEISKSKTIQSMPSYFGGEEEEDIPDMLGYEEPDNLIETDEATFQSTYL 687
            DEEENLPSME+LEIS+  +++   S+ GGE++EDIPDM  ++E DN+IETD     STYL
Sbjct: 121  DEEENLPSMESLEISEKSSVKQTSSHTGGEDDEDIPDMEEFKEYDNIIETD----PSTYL 176

Query: 688  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 867
            VAHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 177  VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 236

Query: 868  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTIE 1047
            VTIEDHPHLPGKHAS+HPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKFMASVIPTIE
Sbjct: 237  VTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIE 296

Query: 1048 YDYTMDFDLGSSSH 1089
            YDYTMDFDLGSSS+
Sbjct: 297  YDYTMDFDLGSSSN 310


Top