BLASTX nr result

ID: Coptis24_contig00006969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006969
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|2...   352   6e-95
ref|XP_002519457.1| zinc finger protein, putative [Ricinus commu...   344   2e-92
gb|AFK44622.1| unknown [Lotus japonicus]                              340   2e-91
ref|XP_002274709.1| PREDICTED: RING finger and CHY zinc finger d...   340   2e-91
ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger d...   340   2e-91

>ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|222850712|gb|EEE88259.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  352 bits (903), Expect = 6e-95
 Identities = 145/192 (75%), Positives = 171/192 (89%)
 Frame = +2

Query: 269 HCDMSDANSMEVYPLDRHDLPRHEVHKVICSLCNTEQDVHQNCINCGVCMGKYFCGICNF 448
           HC     N +E  PLDRHD+PRHEV KVICSLC+TEQDV QNCINCGVCMGKY+C  C F
Sbjct: 53  HCHNDAKNGLETNPLDRHDIPRHEVTKVICSLCDTEQDVKQNCINCGVCMGKYYCSKCKF 112

Query: 449 FDDDVSKNQYHCIGCGICRTGGKENFFHCDRCGCCYASSLKNSHRCVERAMHHNCPVCFE 628
           FDDDVSKNQYHC  CGICRTGGKENFFHC++CGCCY+  +K++HRCVERAMHHNCPVCFE
Sbjct: 113 FDDDVSKNQYHCDECGICRTGGKENFFHCNKCGCCYSMLMKDAHRCVERAMHHNCPVCFE 172

Query: 629 YLFDSMKDISVLQCGHTIHLDCLKEMEMHFKFACPVCSRSVCDMSKVWEKLDQEITSTPM 808
           +LFD+M+DI+VL CGHTIHL+CLKEME H++++CPVCS+S+CDM+++W+KLDQEI +TPM
Sbjct: 173 FLFDTMRDITVLPCGHTIHLECLKEMEQHYRYSCPVCSKSICDMTRLWKKLDQEIAATPM 232

Query: 809 PEMYQNKMVWIL 844
           PE YQNKMVWIL
Sbjct: 233 PETYQNKMVWIL 244


>ref|XP_002519457.1| zinc finger protein, putative [Ricinus communis]
           gi|223541320|gb|EEF42871.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 282

 Score =  344 bits (882), Expect = 2e-92
 Identities = 146/192 (76%), Positives = 164/192 (85%)
 Frame = +2

Query: 269 HCDMSDANSMEVYPLDRHDLPRHEVHKVICSLCNTEQDVHQNCINCGVCMGKYFCGICNF 448
           HC     NS+EV PLDRHD+PRHE+ +VICSLC  EQDV Q+CI CGVCMGKYFC  C F
Sbjct: 47  HCHNESKNSVEVNPLDRHDVPRHELKRVICSLCGKEQDVQQHCIQCGVCMGKYFCSKCKF 106

Query: 449 FDDDVSKNQYHCIGCGICRTGGKENFFHCDRCGCCYASSLKNSHRCVERAMHHNCPVCFE 628
           FDDD SK QYHC  CGICRTGGKENFFHC RCGCCY+  LK+SH CVERAMHHNCPVCFE
Sbjct: 107 FDDDDSKQQYHCDECGICRTGGKENFFHCSRCGCCYSKLLKDSHNCVERAMHHNCPVCFE 166

Query: 629 YLFDSMKDISVLQCGHTIHLDCLKEMEMHFKFACPVCSRSVCDMSKVWEKLDQEITSTPM 808
           YLFD+ +DI+VL CGHTIHL+C+KEME HF++ACPVCSRS CDMS VWEKLD+E+ STPM
Sbjct: 167 YLFDTTRDITVLPCGHTIHLECVKEMERHFQYACPVCSRSYCDMSCVWEKLDREVASTPM 226

Query: 809 PEMYQNKMVWIL 844
           P++YQNKMVWIL
Sbjct: 227 PQIYQNKMVWIL 238


>gb|AFK44622.1| unknown [Lotus japonicus]
          Length = 299

 Score =  340 bits (873), Expect = 2e-91
 Identities = 139/192 (72%), Positives = 161/192 (83%)
 Frame = +2

Query: 269 HCDMSDANSMEVYPLDRHDLPRHEVHKVICSLCNTEQDVHQNCINCGVCMGKYFCGICNF 448
           HC     NS E+ PLDRHD+PRHE+ KVICSLC+TEQDV Q CINCGVCMGKYFC  C F
Sbjct: 61  HCHNEAKNSEEIKPLDRHDIPRHEIEKVICSLCDTEQDVQQYCINCGVCMGKYFCATCKF 120

Query: 449 FDDDVSKNQYHCIGCGICRTGGKENFFHCDRCGCCYASSLKNSHRCVERAMHHNCPVCFE 628
           FDDD+SKNQYHC  CGICR GGK+NFFHC RCGCCY   ++  H CVE+AMHHNCPVCFE
Sbjct: 121 FDDDISKNQYHCDECGICRIGGKDNFFHCKRCGCCYTKEMEKGHHCVEKAMHHNCPVCFE 180

Query: 629 YLFDSMKDISVLQCGHTIHLDCLKEMEMHFKFACPVCSRSVCDMSKVWEKLDQEITSTPM 808
           YLFD++KDI+VL CGHTIHL+C+KEME H +F CPVCS+S+CDMS +W+KLDQ + STPM
Sbjct: 181 YLFDTLKDITVLPCGHTIHLECVKEMEKHHRFTCPVCSKSICDMSSLWKKLDQVVASTPM 240

Query: 809 PEMYQNKMVWIL 844
           PE Y+NKM+WIL
Sbjct: 241 PETYRNKMIWIL 252


>ref|XP_002274709.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 [Vitis vinifera] gi|297734901|emb|CBI17135.3|
           unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  340 bits (873), Expect = 2e-91
 Identities = 141/192 (73%), Positives = 167/192 (86%)
 Frame = +2

Query: 269 HCDMSDANSMEVYPLDRHDLPRHEVHKVICSLCNTEQDVHQNCINCGVCMGKYFCGICNF 448
           HC     N +E  P DRHD+PRHEV KVICSLC+TEQDV QNCI CGVCMG+YFC  C F
Sbjct: 51  HCHNEAKNLLETDPHDRHDIPRHEVKKVICSLCDTEQDVQQNCIACGVCMGEYFCEKCKF 110

Query: 449 FDDDVSKNQYHCIGCGICRTGGKENFFHCDRCGCCYASSLKNSHRCVERAMHHNCPVCFE 628
           FDDDVSKNQYHC  CGICRTGGKENFFHC++CGCCY++ +K++HRCVERAMHHNCPVCFE
Sbjct: 111 FDDDVSKNQYHCEECGICRTGGKENFFHCNKCGCCYSNMMKDTHRCVERAMHHNCPVCFE 170

Query: 629 YLFDSMKDISVLQCGHTIHLDCLKEMEMHFKFACPVCSRSVCDMSKVWEKLDQEITSTPM 808
           +LFD+ KDI+VLQCGHTIH +C+KEM+ HF ++CPVCS+S+CDMS +WEK+D+E+ STPM
Sbjct: 171 FLFDTTKDITVLQCGHTIHWECVKEMQQHFCYSCPVCSKSICDMSSLWEKIDREVASTPM 230

Query: 809 PEMYQNKMVWIL 844
           PEMY+ KMVWIL
Sbjct: 231 PEMYRKKMVWIL 242


>ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 isoform 2 [Vitis vinifera]
           gi|225441159|ref|XP_002268149.1| PREDICTED: RING finger
           and CHY zinc finger domain-containing protein 1 isoform
           1 [Vitis vinifera] gi|297739980|emb|CBI30162.3| unnamed
           protein product [Vitis vinifera]
          Length = 289

 Score =  340 bits (872), Expect = 2e-91
 Identities = 142/192 (73%), Positives = 165/192 (85%)
 Frame = +2

Query: 269 HCDMSDANSMEVYPLDRHDLPRHEVHKVICSLCNTEQDVHQNCINCGVCMGKYFCGICNF 448
           HC     N++EV PL RHD+PRHE+ +VICSLC TEQDV QNCI+CGVCMG+YFC  C F
Sbjct: 52  HCHNEAKNALEVDPLTRHDVPRHEIKRVICSLCGTEQDVQQNCIHCGVCMGQYFCSKCKF 111

Query: 449 FDDDVSKNQYHCIGCGICRTGGKENFFHCDRCGCCYASSLKNSHRCVERAMHHNCPVCFE 628
           FDDDVSK  YHC  CGICRTGG+ENFFHCD+CGCCY+++LK+SH CVERAMHHNCPVCFE
Sbjct: 112 FDDDVSKQIYHCNKCGICRTGGEENFFHCDKCGCCYSTALKDSHNCVERAMHHNCPVCFE 171

Query: 629 YLFDSMKDISVLQCGHTIHLDCLKEMEMHFKFACPVCSRSVCDMSKVWEKLDQEITSTPM 808
           YLFD+  DI+VL CGHTIHL+CLKEME HF+++CPVCS+S CDMS VWEKLDQE+  TPM
Sbjct: 172 YLFDTTTDITVLHCGHTIHLECLKEMERHFQYSCPVCSKSYCDMSHVWEKLDQEVALTPM 231

Query: 809 PEMYQNKMVWIL 844
           P M++NKMVWIL
Sbjct: 232 PSMFENKMVWIL 243


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