BLASTX nr result

ID: Coptis24_contig00006957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006957
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini...   189   2e-46
emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]   189   2e-46
ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vini...   181   5e-44
emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]   181   5e-44
ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737034|emb|CBI26235.3| unnamed protein product
           [Vitis vinifera]
          Length = 674

 Score =  189 bits (480), Expect = 2e-46
 Identities = 90/143 (62%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
 Frame = -1

Query: 439 PLDPLTAKEFNQIQTIITKSQADPTHNLTFQYVGLDDPDKQTILKWHSL-NHTTQPPPRQ 263
           PLD LT  EF Q+Q I+  S    +HN+TFQYVGLD+PDK  +L W S  N TT PPPR+
Sbjct: 29  PLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTLPPPRR 88

Query: 262 ALVITRVNKQTHETIVDLSSHSILSTRVYTGYGYPLFTFEEQIAANQLPLKYPPFIASVS 83
           A VITR++ QTHE IVDLS+ SI+S +VY+G+GYPL T EEQ AA++LPL YPPFIAS+ 
Sbjct: 89  AFVITRLHSQTHEIIVDLSTQSIVSDKVYSGHGYPLLTSEEQTAASELPLTYPPFIASIR 148

Query: 82  KRKLNLTEVVCESFSVGWFGEKK 14
           KRKL L++VVC +F+VGWFGE+K
Sbjct: 149 KRKLKLSDVVCSTFTVGWFGEEK 171


>emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]
          Length = 644

 Score =  189 bits (480), Expect = 2e-46
 Identities = 90/143 (62%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
 Frame = -1

Query: 439 PLDPLTAKEFNQIQTIITKSQADPTHNLTFQYVGLDDPDKQTILKWHSL-NHTTQPPPRQ 263
           PLD LT  EF Q+Q I+  S    +HN+TFQYVGLD+PDK  +L W S  N TT PPPR+
Sbjct: 29  PLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTLPPPRR 88

Query: 262 ALVITRVNKQTHETIVDLSSHSILSTRVYTGYGYPLFTFEEQIAANQLPLKYPPFIASVS 83
           A VITR++ QTHE IVDLS+ SI+S +VY+G+GYPL T EEQ AA++LPL YPPFIAS+ 
Sbjct: 89  AFVITRLHSQTHEIIVDLSTQSIVSDKVYSGHGYPLLTSEEQTAASELPLTYPPFIASIR 148

Query: 82  KRKLNLTEVVCESFSVGWFGEKK 14
           KRKL L++VVC +F+VGWFGE+K
Sbjct: 149 KRKLKLSDVVCSTFTVGWFGEEK 171


>ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737032|emb|CBI26233.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/143 (61%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = -1

Query: 439 PLDPLTAKEFNQIQTIITKSQADPTHNLTFQYVGLDDPDKQTILKWHSL-NHTTQPPPRQ 263
           PLD LT  EF+Q+Q I+  S    + N+TFQYVGLD+PDK  +L W S  N TT PPPR+
Sbjct: 24  PLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDKSIVLSWLSNPNSTTPPPPRR 83

Query: 262 ALVITRVNKQTHETIVDLSSHSILSTRVYTGYGYPLFTFEEQIAANQLPLKYPPFIASVS 83
           A VITR++ QTHE IVDLS+ SI+S  VY G+GYPL T EEQ AA+ LPL YPPFIAS++
Sbjct: 84  AFVITRLHSQTHEIIVDLSTQSIISDEVYGGHGYPLLTSEEQTAASVLPLTYPPFIASIT 143

Query: 82  KRKLNLTEVVCESFSVGWFGEKK 14
           KR L L++VVC +F+VGWFGE K
Sbjct: 144 KRSLKLSDVVCSTFTVGWFGEDK 166


>emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]
          Length = 654

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/143 (61%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = -1

Query: 439 PLDPLTAKEFNQIQTIITKSQADPTHNLTFQYVGLDDPDKQTILKWHSL-NHTTQPPPRQ 263
           PLD LT  EF+Q+Q I+  S    + N+TFQYVGLD+PDK  +L W S  N TT PPPR+
Sbjct: 24  PLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDKSIVLSWLSNPNSTTPPPPRR 83

Query: 262 ALVITRVNKQTHETIVDLSSHSILSTRVYTGYGYPLFTFEEQIAANQLPLKYPPFIASVS 83
           A VITR++ QTHE IVDLS+ SI+S  VY G+GYPL T EEQ AA+ LPL YPPFIAS++
Sbjct: 84  AFVITRLHSQTHEIIVDLSTQSIISDEVYGGHGYPLLTSEEQTAASVLPLTYPPFIASIT 143

Query: 82  KRKLNLTEVVCESFSVGWFGEKK 14
           KR L L++VVC +F+VGWFGE K
Sbjct: 144 KRSLKLSDVVCSTFTVGWFGEDK 166


>ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/146 (55%), Positives = 106/146 (72%)
 Frame = -1

Query: 439 PLDPLTAKEFNQIQTIITKSQADPTHNLTFQYVGLDDPDKQTILKWHSLNHTTQPPPRQA 260
           PLD LT  EF++I+ I+  S   P+H   F YVGL+DP+K T+L W   + TT+ PPRQA
Sbjct: 28  PLDSLTPAEFSKIRAIVHSSYPIPSHTTAFHYVGLEDPNKLTVLSWLK-DPTTKTPPRQA 86

Query: 259 LVITRVNKQTHETIVDLSSHSILSTRVYTGYGYPLFTFEEQIAANQLPLKYPPFIASVSK 80
            VI R+N+ THE  VDL+ + I+S ++Y GYGYPL TFEEQIAAN LPLKY PF+ S+ K
Sbjct: 87  FVIARINQTTHEITVDLTINKIVSDKLYDGYGYPLLTFEEQIAANALPLKYAPFLESIRK 146

Query: 79  RKLNLTEVVCESFSVGWFGEKKKDKR 2
           R L + EVVC  F+VGW+GE+++ KR
Sbjct: 147 RGLKIEEVVCGGFTVGWYGEERRKKR 172


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