BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006956
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25886.3| unnamed protein product [Vitis vinifera]              124   2e-26
ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, ch...   122   7e-26
ref|XP_002530604.1| GTP-binding protein hflx, putative [Ricinus ...   115   5e-24
ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ...   114   2e-23
ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, ch...   112   5e-23

>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  124 bits (311), Expect = 2e-26
 Identities = 70/138 (50%), Positives = 89/138 (64%), Gaps = 15/138 (10%)
 Frame = -1

Query: 516 NPTSSQPPRLKNSPLT-------------KKEAV*SVHNPNFIYNKDPEKPPKLFVVQPR 376
           NP SS PP L+  P++             KKE     +N   ++N+DP+ PPKLFVVQPR
Sbjct: 41  NP-SSIPPNLQFPPISILSSSFSQTPLLQKKE---DPYNDASLFNRDPKSPPKLFVVQPR 96

Query: 375 LRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAPVIVQNPVARS--INSGTYF 202
           LR D  L+AKL EA+NLANSLEEQRDG++  ++ EK  P  V+VQNP  RS    S TYF
Sbjct: 97  LRPDTLLQAKLDEAINLANSLEEQRDGYYDTELCEKGLPPHVVVQNPAVRSSKYRSDTYF 156

Query: 201 GSGNVKTIKCHIDAEETK 148
           G G V T+KCH++A E+K
Sbjct: 157 GPGTVDTVKCHLNAVESK 174


>ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
           partial [Vitis vinifera]
          Length = 555

 Score =  122 bits (305), Expect = 7e-26
 Identities = 59/101 (58%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
 Frame = -1

Query: 444 HNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKE 265
           +N   ++N+DP+ PPKLFVVQPRLR D  L+AKL EA+NLANSLEEQRDG++  ++ EK 
Sbjct: 6   YNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDTELCEKG 65

Query: 264 RPAPVIVQNPVARS--INSGTYFGSGNVKTIKCHIDAEETK 148
            P  V+VQNP  RS    S TYFG G V T+KCH++A E+K
Sbjct: 66  LPPHVVVQNPAVRSSKYRSDTYFGPGTVDTVKCHLNAVESK 106


>ref|XP_002530604.1| GTP-binding protein hflx, putative [Ricinus communis]
           gi|223529852|gb|EEF31784.1| GTP-binding protein hflx,
           putative [Ricinus communis]
          Length = 625

 Score =  115 bits (289), Expect = 5e-24
 Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
 Frame = -1

Query: 444 HNPNFIYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKE 265
           H    I N+DP  PP+LFVVQPRLR D  L+AKL+EAL LANSLEEQRDG+F  D  +K 
Sbjct: 51  HGVVSIINRDPTSPPRLFVVQPRLRPDSFLQAKLNEALCLANSLEEQRDGYFDTDFFDKA 110

Query: 264 RPAPVIVQNPVARS--INSGTYFGSGNVKTIKCHIDAEETK 148
            P  VIVQNP+ RS    + T+FG G V TIKCH++A E+K
Sbjct: 111 LPPHVIVQNPILRSSRARADTFFGPGTVNTIKCHLNASESK 151


>ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At3g49725,
           chloroplastic-like [Cucumis sativus]
          Length = 631

 Score =  114 bits (284), Expect = 2e-23
 Identities = 57/95 (60%), Positives = 70/95 (73%)
 Frame = -1

Query: 429 IYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAPV 250
           ++N+D   PPKLFVVQPRLR    L+AKL+EAL LANSLEEQRDG+F  D  +K+ P  V
Sbjct: 68  LFNRDLTAPPKLFVVQPRLRPYTFLQAKLNEALCLANSLEEQRDGYFHIDFFDKDVPPYV 127

Query: 249 IVQNPVARSINSGTYFGSGNVKTIKCHIDAEETKV 145
           +VQNP  R   + TYFG G V TIKCH++A E+KV
Sbjct: 128 VVQNPSVRGARADTYFGPGTVDTIKCHLNAAESKV 162


>ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
           [Cucumis sativus]
          Length = 593

 Score =  112 bits (281), Expect = 5e-23
 Identities = 57/99 (57%), Positives = 71/99 (71%)
 Frame = -1

Query: 429 IYNKDPEKPPKLFVVQPRLRSDVALKAKLSEALNLANSLEEQRDGFFVGDISEKERPAPV 250
           ++N+D   PPKLFVVQPRLR    L+AKL+EAL LANSLEEQRDG+F  D  +K+ P  V
Sbjct: 68  LFNRDLTAPPKLFVVQPRLRPYTFLQAKLNEALCLANSLEEQRDGYFHIDFFDKDVPPYV 127

Query: 249 IVQNPVARSINSGTYFGSGNVKTIKCHIDAEETKVTWDS 133
           +VQNP  R   + TYFG G V TIKCH++A E+K   D+
Sbjct: 128 VVQNPSVRGARADTYFGPGTVDTIKCHLNAAESKSEVDA 166