BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006953
         (1473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43045.1| unknown [Lotus japonicus]                              123   1e-25
gb|AAU12863.1| coat protein [Lettuce big-vein associated virus]        84   7e-14
gb|AAS76653.1| coat protein [Lettuce big-vein associated virus]        84   7e-14
gb|AAS76652.1| coat protein [Lettuce big-vein associated virus]        84   7e-14
gb|AFA36171.1| coat protein [Lettuce big-vein associated virus]        84   7e-14

>gb|AFK43045.1| unknown [Lotus japonicus]
          Length = 166

 Score =  123 bits (309), Expect = 1e-25
 Identities = 61/160 (38%), Positives = 100/160 (62%)
 Frame = +2

Query: 788  RATLYRFLYNVNWDGDDGSLQRYLYDIHLSHTGMHVVPIAYKICIVMNCTPATLFTVMYA 967
            + TL++ LY  + +     L+R+LYD+HL++ G+HVV I+ ++C V+N     L  +M  
Sbjct: 5    KVTLFKLLYASSSNNRALGLKRFLYDLHLANPGLHVVNISIRLCKVLNVPGQKLIDIMNV 64

Query: 968  NRFRPQISGLIEVFKLMMNTDENHKRQMWKYGRIFDSEFLASLQTRRCPKFVYSMACILL 1147
              FR Q   L E+ +L++   ++HKR+MW++GRIFDS F+A LQT+ C K VY +A  L 
Sbjct: 65   GEFRRQAVALAEMIRLVVIKADDHKRKMWRFGRIFDSTFMAELQTKACSKLVYILAYALK 124

Query: 1148 RESPKYHAGILGIKQLEEVGQEDQNRLLAEAKTLIDAIKS 1267
             E P  +  IL I QL+    + +++L A A+ +I +++S
Sbjct: 125  SEQPHGNENILDIVQLQNFSPDMKHKLSAAAQKVIKSLRS 164


>gb|AAU12863.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
 Frame = +2

Query: 461  RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPTEYGDS-YQIAQGYSYLAASMLKMFA 637
            R+ P  D     ADV++  L+    +     +E      S  +I +  +++AAS LKMFA
Sbjct: 88   RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDVSDIEIIRAGAFIAASTLKMFA 147

Query: 638  KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSISELMRATLYRFL 811
            KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 148  KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 207

Query: 812  YNVNWDGDDGSLQRYLYDIHLSHTGMHVVPIAYKICIVMNCTPATLFTVM-YANRFRPQI 988
            Y V  D  D      L+D HL+ TGMH++P      + +  T A L + + Y   F    
Sbjct: 208  YAVG-DVTDPRQSEMLFDQHLASTGMHIIPQFTNAQLSIGATTAGLLSALNYGQNF---- 262

Query: 989  SGLIEVFKLMMNTDEN-----HKRQMWKYGRIFDSEFLASLQTRRCPKFVYSMACI 1141
             G +   K ++N   +       R  W++ RIFD     +LQT+ C   V  +A I
Sbjct: 263  -GTLMQLKKLINESLSKPPGPDNRATWRFARIFDPSVFQTLQTKYCADTVAILANI 317


>gb|AAS76653.1| coat protein [Lettuce big-vein associated virus]
          Length = 336

 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 9/236 (3%)
 Frame = +2

Query: 461  RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPT-EYGDSYQIAQGYSYLAASMLKMFA 637
            R+ P  D     ADV++  L+    +     +E   +     +I +  +++AAS LKMFA
Sbjct: 50   RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDASDIEIIRAGAFIAASTLKMFA 109

Query: 638  KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSISELMRATLYRFL 811
            KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 110  KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 169

Query: 812  YNVNWDGDDGSLQRYLYDIHLSHTGMHVVPIAYKICIVMNCTPATLFTVM-YANRFRPQI 988
            Y +  D  D      L+D HL++TGMH++P      + +  T A L + + Y   F    
Sbjct: 170  YALG-DVTDPRQTEMLFDQHLANTGMHIIPQFTNAQLSIGATAAGLLSALNYGQNF---- 224

Query: 989  SGLIEVFKLMMNTDEN-----HKRQMWKYGRIFDSEFLASLQTRRCPKFVYSMACI 1141
             G +   K ++N   +       R  W++ RIFD     +LQT+ C   V  +A I
Sbjct: 225  -GTLMQLKKLINESLSKPPGPDNRATWRFARIFDPSVFQTLQTKYCADTVAILANI 279


>gb|AAS76652.1| coat protein [Lettuce big-vein associated virus]
          Length = 336

 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 9/236 (3%)
 Frame = +2

Query: 461  RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPT-EYGDSYQIAQGYSYLAASMLKMFA 637
            R+ P  D     ADV++  L+    +     +E   +     +I +  +++AAS LKMFA
Sbjct: 50   RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDASDIEIIRAGAFIAASTLKMFA 109

Query: 638  KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSISELMRATLYRFL 811
            KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 110  KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 169

Query: 812  YNVNWDGDDGSLQRYLYDIHLSHTGMHVVPIAYKICIVMNCTPATLFTVM-YANRFRPQI 988
            Y +  D  D      L+D HL++TGMH++P      + +  T A L + + Y   F    
Sbjct: 170  YALG-DVTDPRQTEMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSALNYGQNF---- 224

Query: 989  SGLIEVFKLMMNTDEN-----HKRQMWKYGRIFDSEFLASLQTRRCPKFVYSMACI 1141
             G +   K ++N   +       R  W++ RIFD     +LQT+ C   V  +A I
Sbjct: 225  -GTLMQLKKLINESLSKPPGPDNRATWRFARIFDPSVFQTLQTKYCADTVAILANI 279


>gb|AFA36171.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 9/236 (3%)
 Frame = +2

Query: 461  RLMPDSDSLAMLADVEIGILDKTVYESSGTSIEPT-EYGDSYQIAQGYSYLAASMLKMFA 637
            R+ P  D     ADV++  L+    +     +E   +     +I +  +++AAS LKMFA
Sbjct: 88   RIFPAKDKGKDTADVDVKNLEVAGVDYIDAMVETNVKDASDIEIIRAGAFIAASTLKMFA 147

Query: 638  KSAENYEKSW--SHIVHGYRKFYSVNCPISGVRLKTDVIKSIHDHFSISELMRATLYRFL 811
            KS   + ++W   HI   Y  F     P       T   +++++ +   +L + TL R L
Sbjct: 148  KSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQKLYQGTLGRIL 207

Query: 812  YNVNWDGDDGSLQRYLYDIHLSHTGMHVVPIAYKICIVMNCTPATLFTVM-YANRFRPQI 988
            Y +  D  D      L+D HL++TGMH++P      + +  T A L + + Y   F    
Sbjct: 208  YALG-DVTDPRQTEMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSALNYGQNF---- 262

Query: 989  SGLIEVFKLMMNTDEN-----HKRQMWKYGRIFDSEFLASLQTRRCPKFVYSMACI 1141
             G +   K ++N   +       R  W++ RIFD     +LQT+ C   V  +A I
Sbjct: 263  -GTLMQLKKLINESLSKPPGPDNRATWRFARIFDPSVFQTLQTKYCADTVAILANI 317