BLASTX nr result

ID: Coptis24_contig00006950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006950
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523284.1| expressed protein, putative [Ricinus communi...   170   6e-40
ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|2...   163   7e-38
ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258...   159   8e-37
ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802...   154   3e-35
emb|CBI32690.3| unnamed protein product [Vitis vinifera]              153   7e-35

>ref|XP_002523284.1| expressed protein, putative [Ricinus communis]
            gi|223537497|gb|EEF39123.1| expressed protein, putative
            [Ricinus communis]
          Length = 282

 Score =  170 bits (430), Expect = 6e-40
 Identities = 91/193 (47%), Positives = 114/193 (59%), Gaps = 5/193 (2%)
 Frame = +3

Query: 447  TGPSNISPQKDTPKTPSFSKGRFAFVGYTPGAGLSGKSDLEANDPTYYRIRQSVHENLLK 626
            T P +++   + P  P            TP    S K D+E N P Y  +   VHENLL+
Sbjct: 53   TNPLSVASPANLPAAP-----------VTPSVNSSSKKDMEENGPAYSLLSHPVHENLLR 101

Query: 627  EGVKLSEK----VDNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRGASVA-RF 791
              VK        VD  LHEL Q GD AQ YM GSK   +DN  LLD +VQGRG   +   
Sbjct: 102  TNVKFQSNRGSMVDMILHELLQHGDSAQKYMQGSKSKKLDNWILLDNYVQGRGKPTSSHI 161

Query: 792  KAKQGHLKRCRRHMSMKQHRKGGSFDFPLESRKFEIFEPMHEMWKEYVLKLIKNPGNTQN 971
            +A Q H KR +RHMSMKQH+K GSFD P + +KF+ F+PMHEMWK Y+ +L+KN G  Q 
Sbjct: 162  RALQAHSKRSKRHMSMKQHKKCGSFDLPQDLQKFDAFKPMHEMWKAYMAQLLKNTGRNQ- 220

Query: 972  IARCLLHADLHGA 1010
            +A+CL+ ADLHGA
Sbjct: 221  LAQCLIGADLHGA 233


>ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|222844979|gb|EEE82526.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  163 bits (412), Expect = 7e-38
 Identities = 103/287 (35%), Positives = 143/287 (49%), Gaps = 4/287 (1%)
 Frame = +3

Query: 174  MASDQKKRTLEALEKRFALAKTEVXXXXXXXXXXXXXXXXXXEEKQQVHTHTXXXXXXXX 353
            MA+DQ+KRT++ALE+RFA+AK E+                  +++Q+ H  T        
Sbjct: 1    MATDQRKRTMDALERRFAVAKAELV-----------------QQQQKKHKVTHHEGHRKE 43

Query: 354  XXXXXXXXXXXXXXXXXXXXXXXXVVDAVAETGPSNISPQKDTPKTPSFSKGRFAFVGYT 533
                                              S    + D PKTPS S          
Sbjct: 44   N-----------------------------NNAASTSLHRADAPKTPSSSLS-------- 66

Query: 534  PGAGLSGKSDLEANDPTYYRIRQSVHENLLKEGVKLSEK----VDNTLHELFQKGDVAQN 701
                   K D E N   Y ++ Q+ HENLL  GVK   K    VD  LHELFQ GD +Q 
Sbjct: 67   -------KKDPEENGLAYSQLPQAAHENLLTTGVKFESKKGSVVDKILHELFQHGDASQK 119

Query: 702  YMHGSKVINIDNRFLLDGFVQGRGASVARFKAKQGHLKRCRRHMSMKQHRKGGSFDFPLE 881
            YM GS+ I IDN  LLD +V  +    ++ +A Q + K  RRHMSMKQH+K G F+ P +
Sbjct: 120  YMQGSRNIKIDNWILLDNYVPSKSTG-SQTRASQSNPKHSRRHMSMKQHKKLGMFNLPQD 178

Query: 882  SRKFEIFEPMHEMWKEYVLKLIKNPGNTQNIARCLLHADLHGAIFRV 1022
             +KF++++PMHE+WK+Y+++L+K  G  + + +CLL ADLHGA   V
Sbjct: 179  LQKFDVYKPMHEIWKDYMMQLLKKTGRNE-LPKCLLSADLHGAAILV 224


>ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258470 [Vitis vinifera]
          Length = 300

 Score =  159 bits (403), Expect = 8e-37
 Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 7/191 (3%)
 Frame = +3

Query: 471  QKDTPKTPSFSKGRFAFV---GYTPGAGLSGKSDLEANDPTYYRIRQSVHENLLKEGVKL 641
            +K +P T SFS G          TP    S K D+EAN P Y ++ Q+VHENLL    K+
Sbjct: 46   EKVSPCTNSFSVGSSTHPTDSSVTPTLNASLKKDVEANGPAYSQLSQTVHENLLATNAKI 105

Query: 642  SEK----VDNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRGASVARFKAKQGH 809
            + K     D  LH+L + GD A  YM GS+ +  DN  LLD  VQGRGAS AR +    H
Sbjct: 106  TSKRGSTADKILHDLLKNGDSAHKYMMGSRSMKFDNWILLDNVVQGRGASGARIRDLLSH 165

Query: 810  LKRCRRHMSMKQHRKGGSFDFPLESRKFEIFEPMHEMWKEYVLKLIKNPGNTQNIARCLL 989
             K  R+H+SMKQ+++ GS + P E  +++IF+PMH+MWK Y+++L+KN G  Q + + LL
Sbjct: 166  SKNSRKHISMKQNKRCGSLNLPQELHRYDIFKPMHDMWKGYMMQLLKNTGKNQ-LVQPLL 224

Query: 990  HADLHGAIFRV 1022
             ADLHGAI  V
Sbjct: 225  SADLHGAIILV 235


>ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802747 [Glycine max]
          Length = 300

 Score =  154 bits (389), Expect = 3e-35
 Identities = 88/199 (44%), Positives = 124/199 (62%), Gaps = 5/199 (2%)
 Frame = +3

Query: 441  AETGPSNISPQKDTPKTPSFSKGRFAFVGYTPGAGLSGKSDLEANDPTYYRIRQSVHENL 620
            A++  ++ SP      + S  KG F+F G+T         D+E + P Y ++   V+ NL
Sbjct: 45   ADSTSNDPSPHLLHSSSVSSKKGNFSFSGHTT------LQDIE-DGPAYAQLSVPVNGNL 97

Query: 621  LKEGVKLSEK----VDNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRG-ASVA 785
            L    + S +    +D  LHEL QKGD A  YM GS+ + IDN  LLD +VQGR  +S +
Sbjct: 98   LTTNEEFSAERGGSIDGILHELLQKGDAAHKYMQGSRNMKIDNWILLDNYVQGRVLSSGS 157

Query: 786  RFKAKQGHLKRCRRHMSMKQHRKGGSFDFPLESRKFEIFEPMHEMWKEYVLKLIKNPGNT 965
            + +A Q H KR ++HMSMK+H+K GS D P E +KF+IF+PMHEMWK+Y++ L+K+ G  
Sbjct: 158  QARALQLHSKRSKKHMSMKRHKKDGSLDLPQEFQKFDIFKPMHEMWKDYIMLLLKSTGKN 217

Query: 966  QNIARCLLHADLHGAIFRV 1022
            Q +A+CLL ADLHGA   V
Sbjct: 218  Q-LAQCLLGADLHGAFILV 235


>emb|CBI32690.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  153 bits (386), Expect = 7e-35
 Identities = 87/197 (44%), Positives = 117/197 (59%), Gaps = 13/197 (6%)
 Frame = +3

Query: 471  QKDTPKTPSFSKGRFAFV---GYTPGAGLSGKS------DLEANDPTYYRIRQSVHENLL 623
            +K +P T SFS G          TP    S K       D+EAN P Y ++ Q+VHENLL
Sbjct: 46   EKVSPCTNSFSVGSSTHPTDSSVTPTLNASLKKGHATSQDVEANGPAYSQLSQTVHENLL 105

Query: 624  KEGVKLSEK----VDNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRGASVARF 791
                K++ K     D  LH+L + GD A  YM GS+ +  DN  LLD  VQGRGAS AR 
Sbjct: 106  ATNAKITSKRGSTADKILHDLLKNGDSAHKYMMGSRSMKFDNWILLDNVVQGRGASGARI 165

Query: 792  KAKQGHLKRCRRHMSMKQHRKGGSFDFPLESRKFEIFEPMHEMWKEYVLKLIKNPGNTQN 971
            +    H K  R+H+SMKQ+++ GS + P E  +++IF+PMH+MWK Y+++L+KN G  Q 
Sbjct: 166  RDLLSHSKNSRKHISMKQNKRCGSLNLPQELHRYDIFKPMHDMWKGYMMQLLKNTGKNQ- 224

Query: 972  IARCLLHADLHGAIFRV 1022
            + + LL ADLHGAI  V
Sbjct: 225  LVQPLLSADLHGAIILV 241


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