BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006943
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein ...   248   1e-63
ref|XP_002509710.1| conserved hypothetical protein [Ricinus comm...   235   1e-59
ref|XP_004141535.1| PREDICTED: ribosomal RNA processing protein ...   234   3e-59
ref|XP_002299562.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
gb|ACU21223.1| unknown [Glycine max]                                  230   5e-58

>ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Vitis
           vinifera] gi|297742597|emb|CBI34746.3| unnamed protein
           product [Vitis vinifera]
          Length = 236

 Score =  248 bits (634), Expect = 1e-63
 Identities = 125/206 (60%), Positives = 160/206 (77%)
 Frame = -1

Query: 848 LAHVSFEELQKARSNGFHAMHQKIKEEKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQV 669
           LA V+FEELQKARS+G H++++  K EK GGR NKNRPME+SSKKPV RFRE IQVPK+V
Sbjct: 29  LADVTFEELQKARSDGSHSVYRMPKSEKKGGRPNKNRPMEVSSKKPVSRFRETIQVPKRV 88

Query: 668 IRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXKSNDPEVIADLKNRLSSI 489
           +RDPRFESLCG LD D F++RY+F+Y                K+NDP+VI +LKN++S I
Sbjct: 89  VRDPRFESLCGTLDADGFRKRYNFLYETELPAEREGLKKELKKANDPKVIEELKNQISWI 148

Query: 488 DKQLKAGPSKHAADKAIVAEHMRSEREAAKEGKHLYHLKQSEIRKRDLMKKFNSLKTAGA 309
           DKQLK+G  KH  D  I+AEH + EREA K+GK  +++K+SEIRK+  ++K+NSLK   +
Sbjct: 149 DKQLKSGSVKH-TDSKILAEHKKKEREATKQGKRPFYIKKSEIRKQRNIEKYNSLK--AS 205

Query: 308 GKLEAFIEKKRRKNASKDHRYVPYRR 231
           GKLE+FIEK+RR+NASKDHRY+PYRR
Sbjct: 206 GKLESFIEKRRRRNASKDHRYMPYRR 231


>ref|XP_002509710.1| conserved hypothetical protein [Ricinus communis]
           gi|223549609|gb|EEF51097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score =  235 bits (599), Expect = 1e-59
 Identities = 121/209 (57%), Positives = 152/209 (72%)
 Frame = -1

Query: 848 LAHVSFEELQKARSNGFHAMHQKIKEEKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQV 669
           +A  +FEELQKARSNG  ++HQK K+EK  GR NKNRPME+S KKPV RFREV Q PK+V
Sbjct: 45  IADATFEELQKARSNGSISVHQKPKQEKKPGRANKNRPMEVSCKKPVSRFREVFQAPKKV 104

Query: 668 IRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXKSNDPEVIADLKNRLSSI 489
           +RDPRFESLCG LD D F++RY+F+Y                KSN+P+VI  LKN +S I
Sbjct: 105 VRDPRFESLCGQLDVDGFRKRYNFLYEENLPAEREEAKKQLKKSNNPKVIDQLKNHISLI 164

Query: 488 DKQLKAGPSKHAADKAIVAEHMRSEREAAKEGKHLYHLKQSEIRKRDLMKKFNSLKTAGA 309
           DK+LK   +K   D AI+AEH + EREAAK GK  +++K SEIRK+ L++KFN LK   +
Sbjct: 165 DKELKFESTKQ-TDAAILAEHKKKEREAAKHGKKPFYMKNSEIRKQRLIEKFNKLKE--S 221

Query: 308 GKLEAFIEKKRRKNASKDHRYVPYRRPNY 222
           GKL +FIEK+R+KNASKDHRY+PYR   +
Sbjct: 222 GKLGSFIEKRRKKNASKDHRYMPYRNSEH 250


>ref|XP_004141535.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis
           sativus] gi|449481495|ref|XP_004156200.1| PREDICTED:
           ribosomal RNA processing protein 36 homolog [Cucumis
           sativus]
          Length = 253

 Score =  234 bits (597), Expect = 3e-59
 Identities = 119/206 (57%), Positives = 154/206 (74%)
 Frame = -1

Query: 848 LAHVSFEELQKARSNGFHAMHQKIKEEKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQV 669
           LA V+FEELQ+ARS+G H+M+QK K+EK  GR NKNRPME+SS+KPV RFREVIQ PK +
Sbjct: 43  LADVTFEELQRARSDGSHSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNM 102

Query: 668 IRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXKSNDPEVIADLKNRLSSI 489
           +RDPRFESL G LD D FK+RYSFIY                K+NDP V  +LK +LS I
Sbjct: 103 VRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWI 162

Query: 488 DKQLKAGPSKHAADKAIVAEHMRSEREAAKEGKHLYHLKQSEIRKRDLMKKFNSLKTAGA 309
           DKQ K+  +K   D AI+A+H + EREAAK GK  ++LK+SEIRK+ L++K+ +LK+   
Sbjct: 163 DKQFKSDSTKR-VDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKS--T 219

Query: 308 GKLEAFIEKKRRKNASKDHRYVPYRR 231
           GKL+A++E+KRRKNA+KD RY+PY+R
Sbjct: 220 GKLDAYVERKRRKNAAKDRRYIPYQR 245


>ref|XP_002299562.1| predicted protein [Populus trichocarpa] gi|222846820|gb|EEE84367.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  231 bits (590), Expect = 2e-58
 Identities = 118/206 (57%), Positives = 153/206 (74%)
 Frame = -1

Query: 848 LAHVSFEELQKARSNGFHAMHQKIKEEKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQV 669
           LA V+FE+LQKA+SNG   + +K  +EK GGR NKNRP E+S KKPV RFREV+QVPK+V
Sbjct: 37  LAEVTFEDLQKAKSNGSLTVFKKPDQEKKGGRANKNRPTEVSCKKPVSRFREVVQVPKKV 96

Query: 668 IRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXKSNDPEVIADLKNRLSSI 489
           +RDPRFESLCGNLD + F++RY F++                KSNDP+VI  LK R+S I
Sbjct: 97  VRDPRFESLCGNLDVEGFRKRYDFLFKNNLPAEKEELKKQLKKSNDPKVIDQLKERISWI 156

Query: 488 DKQLKAGPSKHAADKAIVAEHMRSEREAAKEGKHLYHLKQSEIRKRDLMKKFNSLKTAGA 309
           +KQ K   +K   D AI+AEH + EREAAK+GK  ++LK+S+IRK+ L +K+N LK   +
Sbjct: 157 EKQTKFESTKQ-TDAAILAEHKKKEREAAKQGKRPFYLKKSDIRKQRLTEKYNKLK--AS 213

Query: 308 GKLEAFIEKKRRKNASKDHRYVPYRR 231
           GKLE+FIEK+R+KNA+KDHRY+PYRR
Sbjct: 214 GKLESFIEKRRKKNAAKDHRYMPYRR 239


>gb|ACU21223.1| unknown [Glycine max]
          Length = 250

 Score =  230 bits (586), Expect = 5e-58
 Identities = 119/206 (57%), Positives = 153/206 (74%)
 Frame = -1

Query: 848 LAHVSFEELQKARSNGFHAMHQKIKEEKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQV 669
           LA V+FEELQKARSNG HA  QK KE+K   R NKNRPME SSKKPV  FREVIQ PK+V
Sbjct: 43  LADVTFEELQKARSNGTHAFFQKPKEDKKLKRANKNRPMEASSKKPVSGFREVIQAPKKV 102

Query: 668 IRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXKSNDPEVIADLKNRLSSI 489
           +RDPRFESLCG LD + F++RY+F+Y                K  DP+ I +++ R+S I
Sbjct: 103 VRDPRFESLCGKLDPEGFRKRYNFLYENDLPAERQALKKELKKYKDPKRINEIEERVSWI 162

Query: 488 DKQLKAGPSKHAADKAIVAEHMRSEREAAKEGKHLYHLKQSEIRKRDLMKKFNSLKTAGA 309
           DKQLK+  +KH  D  I+A+H + EREA K+GK  ++LK+SEIRK+ L++K+N LK+  +
Sbjct: 163 DKQLKSDSAKH-IDAEILAKHKKKEREATKQGKRPFYLKKSEIRKQRLIEKYNHLKS--S 219

Query: 308 GKLEAFIEKKRRKNASKDHRYVPYRR 231
           GKLEAF+EK+RR+NA+KDHRY+PYRR
Sbjct: 220 GKLEAFVEKRRRRNAAKDHRYMPYRR 245