BLASTX nr result
ID: Coptis24_contig00006939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006939 (533 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519424.1| DNA binding protein, putative [Ricinus commu... 100 2e-19 ref|XP_002323493.1| predicted protein [Populus trichocarpa] gi|2... 98 7e-19 ref|XP_002326222.1| predicted protein [Populus trichocarpa] gi|2... 97 1e-18 ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248... 94 2e-17 emb|CBI30190.3| unnamed protein product [Vitis vinifera] 94 2e-17 >ref|XP_002519424.1| DNA binding protein, putative [Ricinus communis] gi|223541287|gb|EEF42838.1| DNA binding protein, putative [Ricinus communis] Length = 855 Score = 99.8 bits (247), Expect = 2e-19 Identities = 47/80 (58%), Positives = 60/80 (75%) Frame = +3 Query: 75 ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254 ELPKGKWFCC DC RIH+AL+KL+A E + N LL+V++KK +EK + V DV W+L Sbjct: 616 ELPKGKWFCCPDCGRIHSALKKLLAREAEIIPNKLLEVVMKKNEEKGLETVNNIDVRWKL 675 Query: 255 LSGKMASLENKLLLSKAMTI 314 L+GK AS E KLLLS+A+ I Sbjct: 676 LTGKSASPETKLLLSQALAI 695 >ref|XP_002323493.1| predicted protein [Populus trichocarpa] gi|222868123|gb|EEF05254.1| predicted protein [Populus trichocarpa] Length = 741 Score = 98.2 bits (243), Expect = 7e-19 Identities = 48/80 (60%), Positives = 59/80 (73%) Frame = +3 Query: 75 ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254 ELPKG WFCC DC+RIH+ LQKL+ G EKL +SLL + KK +EK + DV W L Sbjct: 498 ELPKGNWFCCMDCSRIHSTLQKLLIRGAEKLPDSLLNDIKKKHEEKGLNISNSIDVRWTL 557 Query: 255 LSGKMASLENKLLLSKAMTI 314 LSGK+AS ENKLLLS+A++I Sbjct: 558 LSGKIASPENKLLLSRALSI 577 >ref|XP_002326222.1| predicted protein [Populus trichocarpa] gi|222833415|gb|EEE71892.1| predicted protein [Populus trichocarpa] Length = 697 Score = 97.1 bits (240), Expect = 1e-18 Identities = 47/80 (58%), Positives = 59/80 (73%) Frame = +3 Query: 75 ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254 ELPKG WFCC DC+RIH+ LQKL+ G EKL +SLL + KK +E+ + DV W L Sbjct: 461 ELPKGNWFCCMDCSRIHSTLQKLLIRGAEKLPDSLLNDIKKKHEERGLNISNNIDVRWTL 520 Query: 255 LSGKMASLENKLLLSKAMTI 314 LSGK+AS ENKLLLS+A++I Sbjct: 521 LSGKIASPENKLLLSRALSI 540 >ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera] Length = 2411 Score = 93.6 bits (231), Expect = 2e-17 Identities = 44/80 (55%), Positives = 60/80 (75%) Frame = +3 Query: 75 ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254 ELP GKWFCC +C RIH+ALQKL G EKL +SLL V+ +K + K +++ ++V WRL Sbjct: 2177 ELPSGKWFCCLECIRIHSALQKLHVRGEEKLPDSLLNVIKEKHERKGLESIADYNVRWRL 2236 Query: 255 LSGKMASLENKLLLSKAMTI 314 LSGK+AS E ++LLS+A+ I Sbjct: 2237 LSGKLASPETRVLLSEAVAI 2256 >emb|CBI30190.3| unnamed protein product [Vitis vinifera] Length = 879 Score = 93.6 bits (231), Expect = 2e-17 Identities = 44/80 (55%), Positives = 60/80 (75%) Frame = +3 Query: 75 ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254 ELP GKWFCC +C RIH+ALQKL G EKL +SLL V+ +K + K +++ ++V WRL Sbjct: 645 ELPSGKWFCCLECIRIHSALQKLHVRGEEKLPDSLLNVIKEKHERKGLESIADYNVRWRL 704 Query: 255 LSGKMASLENKLLLSKAMTI 314 LSGK+AS E ++LLS+A+ I Sbjct: 705 LSGKLASPETRVLLSEAVAI 724