BLASTX nr result

ID: Coptis24_contig00006939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006939
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519424.1| DNA binding protein, putative [Ricinus commu...   100   2e-19
ref|XP_002323493.1| predicted protein [Populus trichocarpa] gi|2...    98   7e-19
ref|XP_002326222.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248...    94   2e-17
emb|CBI30190.3| unnamed protein product [Vitis vinifera]               94   2e-17

>ref|XP_002519424.1| DNA binding protein, putative [Ricinus communis]
           gi|223541287|gb|EEF42838.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 855

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/80 (58%), Positives = 60/80 (75%)
 Frame = +3

Query: 75  ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254
           ELPKGKWFCC DC RIH+AL+KL+A   E + N LL+V++KK +EK  + V   DV W+L
Sbjct: 616 ELPKGKWFCCPDCGRIHSALKKLLAREAEIIPNKLLEVVMKKNEEKGLETVNNIDVRWKL 675

Query: 255 LSGKMASLENKLLLSKAMTI 314
           L+GK AS E KLLLS+A+ I
Sbjct: 676 LTGKSASPETKLLLSQALAI 695


>ref|XP_002323493.1| predicted protein [Populus trichocarpa] gi|222868123|gb|EEF05254.1|
           predicted protein [Populus trichocarpa]
          Length = 741

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +3

Query: 75  ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254
           ELPKG WFCC DC+RIH+ LQKL+  G EKL +SLL  + KK +EK  +     DV W L
Sbjct: 498 ELPKGNWFCCMDCSRIHSTLQKLLIRGAEKLPDSLLNDIKKKHEEKGLNISNSIDVRWTL 557

Query: 255 LSGKMASLENKLLLSKAMTI 314
           LSGK+AS ENKLLLS+A++I
Sbjct: 558 LSGKIASPENKLLLSRALSI 577


>ref|XP_002326222.1| predicted protein [Populus trichocarpa] gi|222833415|gb|EEE71892.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/80 (58%), Positives = 59/80 (73%)
 Frame = +3

Query: 75  ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254
           ELPKG WFCC DC+RIH+ LQKL+  G EKL +SLL  + KK +E+  +     DV W L
Sbjct: 461 ELPKGNWFCCMDCSRIHSTLQKLLIRGAEKLPDSLLNDIKKKHEERGLNISNNIDVRWTL 520

Query: 255 LSGKMASLENKLLLSKAMTI 314
           LSGK+AS ENKLLLS+A++I
Sbjct: 521 LSGKIASPENKLLLSRALSI 540


>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
          Length = 2411

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/80 (55%), Positives = 60/80 (75%)
 Frame = +3

Query: 75   ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254
            ELP GKWFCC +C RIH+ALQKL   G EKL +SLL V+ +K + K  +++  ++V WRL
Sbjct: 2177 ELPSGKWFCCLECIRIHSALQKLHVRGEEKLPDSLLNVIKEKHERKGLESIADYNVRWRL 2236

Query: 255  LSGKMASLENKLLLSKAMTI 314
            LSGK+AS E ++LLS+A+ I
Sbjct: 2237 LSGKLASPETRVLLSEAVAI 2256


>emb|CBI30190.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/80 (55%), Positives = 60/80 (75%)
 Frame = +3

Query: 75  ELPKGKWFCCTDCNRIHTALQKLVAHGLEKLTNSLLKVMLKKQQEKCPDNVTGFDVIWRL 254
           ELP GKWFCC +C RIH+ALQKL   G EKL +SLL V+ +K + K  +++  ++V WRL
Sbjct: 645 ELPSGKWFCCLECIRIHSALQKLHVRGEEKLPDSLLNVIKEKHERKGLESIADYNVRWRL 704

Query: 255 LSGKMASLENKLLLSKAMTI 314
           LSGK+AS E ++LLS+A+ I
Sbjct: 705 LSGKLASPETRVLLSEAVAI 724


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