BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006898
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like...    75   6e-12
emb|CBI25868.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like...    66   3e-09
ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...    62   4e-08

>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
          Length = 964

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 51/117 (43%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = -3

Query: 351 MVQFHEHIISELVEDNKNGVVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSATPSQKSSI 172
           MVQFHEHII+EL+ED+  G+V                     SQ +LL+LS++PSQK  I
Sbjct: 1   MVQFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLI 60

Query: 171 TNSLLQNSTNPNP-LPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRLPTS 4
              L  N  NPNP LP EIT++L A H                  IVDLLTSR+PTS
Sbjct: 61  LYHLDAN-PNPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTS 116


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
 Frame = -3

Query: 366 KKEKKMVQFHEHIISELVEDNKNGVVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSATPS 187
           KK +  + FHEHII+EL+ED+  G+V                     SQ +LL+LS++PS
Sbjct: 230 KKSEGDLNFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPS 289

Query: 186 QKSSITNSLLQNSTNPNP-LPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRLP 10
           QK  I   L  N  NPNP LP EIT++L A H                  IVDLLTSR+P
Sbjct: 290 QKQLILYHLDAN-PNPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVP 348

Query: 9   TS 4
           TS
Sbjct: 349 TS 350


>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
          Length = 967

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = -3

Query: 351 MVQFHEHIISELVEDNKNGVVXXXXXXXXXXXXXXXXXXXXXSQNTLLILS-ATPSQKSS 175
           MVQFHEHII+EL+ED+  G+V                     SQ TLL+LS ++ S KS 
Sbjct: 1   MVQFHEHIITELLEDSNGGLVVLSSGLALSKLIASLLILHSSSQGTLLLLSPSSTSLKSK 60

Query: 174 ITNSLLQNSTNPNPLPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRLPTS 4
           IT  L   +     +P EIT++L APH                  IVDLLT++LPTS
Sbjct: 61  ITFHLKTLNPQFYQIPAEITADLHAPHRHALYTSGNAFFITPRILIVDLLTNKLPTS 117


>ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|222834003|gb|EEE72480.1|
           predicted protein [Populus trichocarpa]
          Length = 982

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/116 (37%), Positives = 59/116 (50%)
 Frame = -3

Query: 351 MVQFHEHIISELVEDNKNGVVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSATPSQKSSI 172
           MVQFHEHII++L+ED   G+V                     SQ TLLI S  P+ KS I
Sbjct: 1   MVQFHEHIITDLLEDPAGGLVILSSGLSLPKLVSSLLSLHSPSQGTLLIFSPPPTLKSLI 60

Query: 171 TNSLLQNSTNPNPLPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRLPTS 4
              L  ++TNPNP+  EIT++L + H                  IVDLL++++PTS
Sbjct: 61  ---LHHHNTNPNPI--EITADLPSHHRLSLYSSGQICFITPRILIVDLLSNKIPTS 111


>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
           gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
           [Medicago truncatula]
          Length = 984

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/116 (35%), Positives = 55/116 (47%)
 Frame = -3

Query: 351 MVQFHEHIISELVEDNKNGVVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSATPSQKSSI 172
           ++QFHEHII+EL+ED   G+                      SQ TLLILS +P+ KS I
Sbjct: 2   VLQFHEHIITELLEDTNGGLTILSSGLSLSKLISSLLLLHSSSQGTLLILSPSPTLKSKI 61

Query: 171 TNSLLQNSTNPNPLPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRLPTS 4
              L   +   + +P EIT++L   H                  IVDLLT++LPTS
Sbjct: 62  NFHLKTLNPQLHQIPTEITADLPVNHRHSLYSSGHVCFITPRILIVDLLTNKLPTS 117