BLASTX nr result

ID: Coptis24_contig00006897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006897
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275123.1| PREDICTED: uncharacterized protein LOC100261...   136   3e-30
ref|XP_003554250.1| PREDICTED: uncharacterized protein LOC100783...   124   1e-26
gb|ACU24550.1| unknown [Glycine max]                                  123   2e-26
ref|XP_002874895.1| hypothetical protein ARALYDRAFT_911921 [Arab...   115   1e-24
ref|NP_567246.1| uncharacterized protein [Arabidopsis thaliana] ...   115   1e-24

>ref|XP_002275123.1| PREDICTED: uncharacterized protein LOC100261455 [Vitis vinifera]
           gi|296086700|emb|CBI32335.3| unnamed protein product
           [Vitis vinifera]
          Length = 341

 Score =  136 bits (342), Expect = 3e-30
 Identities = 80/160 (50%), Positives = 103/160 (64%), Gaps = 12/160 (7%)
 Frame = +1

Query: 22  GLGKRKRLSKEYCLLLLRGFDXXXXXXXXXXXXXDTAMHGARELAKP-SLTEALHCDQEK 198
           G   R    KE  LLLLRGFD             D A+ GAR +AKP +LT+  HC+ EK
Sbjct: 64  GESDRGNRLKEDSLLLLRGFDSISHSLSQLTNNLDNALQGARSIAKPPTLTDIFHCNLEK 123

Query: 199 TAS---------DEVENKRGVKRKPNPHESSNNQEDHEEKEKEQSLESGK--KAKNLAIS 345
           +           D+ E+KRG+KRK + +E S +Q  + ++E EQS   GK  KAKNLAIS
Sbjct: 124 SKGKEEVSEKEDDDEESKRGLKRKLDGNEGSEDQGGNSQRENEQSPGEGKLKKAKNLAIS 183

Query: 346 MATKAATLARELRSIKSNFSFMQERCSMLEEENRRLKEGY 465
           MATKAA+LAREL+SIKS+  FMQERC++LEEEN RL++G+
Sbjct: 184 MATKAASLARELKSIKSDLCFMQERCALLEEENSRLRDGF 223


>ref|XP_003554250.1| PREDICTED: uncharacterized protein LOC100783134 [Glycine max]
          Length = 340

 Score =  124 bits (311), Expect = 1e-26
 Identities = 72/152 (47%), Positives = 99/152 (65%), Gaps = 13/152 (8%)
 Frame = +1

Query: 49  KEYCLLLLRGFDXXXXXXXXXXXXXDTAMHGARELAKP-SLTEALHCDQEKTAS------ 207
           KE  +LL+RGFD             D A+HGARELA P +LT+  H   +K  +      
Sbjct: 75  KEDSMLLMRGFDSVAHTLSLLSNNLDNALHGARELANPPTLTDIFHSKYDKVENKEDSGE 134

Query: 208 ---DEVENKRGVKRKPNPHE-SSNNQEDHEEKEKEQSLESG--KKAKNLAISMATKAATL 369
              +E E+K+G+KRK +P++ S  N  D +++E  + +     KKAKNLA+SMATKAA+L
Sbjct: 135 KQKEEEESKQGMKRKFDPNDVSEENAVDSQKEENGKKMMDTNIKKAKNLAVSMATKAASL 194

Query: 370 ARELRSIKSNFSFMQERCSMLEEENRRLKEGY 465
           AREL+SIKS+  FMQERC +LEEENRRL++G+
Sbjct: 195 ARELKSIKSDLCFMQERCGLLEEENRRLRDGF 226


>gb|ACU24550.1| unknown [Glycine max]
          Length = 340

 Score =  123 bits (309), Expect = 2e-26
 Identities = 72/152 (47%), Positives = 99/152 (65%), Gaps = 13/152 (8%)
 Frame = +1

Query: 49  KEYCLLLLRGFDXXXXXXXXXXXXXDTAMHGARELAKP-SLTEALHCDQEKTAS------ 207
           KE  +LL+RGFD             D A+HGARELA P +LT+  H   +K  +      
Sbjct: 75  KEDSMLLMRGFDSVAHTLSLLSNNLDNALHGARELANPPTLTDIFHSKFDKVENKEDSGE 134

Query: 208 ---DEVENKRGVKRKPNPHE-SSNNQEDHEEKEKEQSLESG--KKAKNLAISMATKAATL 369
              +E E+K+G+KRK +P++ S  N  D +++E  + +     KKAKNLA+SMATKAA+L
Sbjct: 135 KQKEEEESKQGMKRKFDPNDVSEENAVDSQKEENGKKMMDTNIKKAKNLAVSMATKAASL 194

Query: 370 ARELRSIKSNFSFMQERCSMLEEENRRLKEGY 465
           AREL+SIKS+  FMQERC +LEEENRRL++G+
Sbjct: 195 ARELKSIKSDLCFMQERCGLLEEENRRLRDGF 226


>ref|XP_002874895.1| hypothetical protein ARALYDRAFT_911921 [Arabidopsis lyrata subsp.
           lyrata] gi|297320732|gb|EFH51154.1| hypothetical protein
           ARALYDRAFT_911921 [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score =  115 bits (288), Expect(2) = 1e-24
 Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 9/157 (5%)
 Frame = +1

Query: 22  GLGKRKRLSKEYCLLLLRGFDXXXXXXXXXXXXXDTAMHGARELAKP-SLTEALH----C 186
           G  +R    K   +LLL+GFD             D A+ G RELAKP SL+E LH     
Sbjct: 72  GETERSMRFKNDSMLLLKGFDSVSHTLSQLSSNLDNALQGVRELAKPPSLSEILHSNLKA 131

Query: 187 DQ-EKTASDEVENKRGVKRKPNPHESSNNQEDHEEKEKEQSLESGK---KAKNLAISMAT 354
           DQ ++   +E E  +G KRK   HES   Q++    E+E+  +  K   KAKN+AISMA 
Sbjct: 132 DQIQRQQKEEEEESKGTKRK---HESDIEQKEDSSNEEEKRPKERKIMNKAKNIAISMAA 188

Query: 355 KAATLARELRSIKSNFSFMQERCSMLEEENRRLKEGY 465
           KA +LAREL+SIKS+ SF+QERC +LEEEN+RL++G+
Sbjct: 189 KANSLARELKSIKSDLSFIQERCGLLEEENKRLRDGF 225



 Score = 23.5 bits (49), Expect(2) = 1e-24
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 470 KGMRPEEDELI 502
           KG+RPEED+L+
Sbjct: 227 KGVRPEEDDLV 237


>ref|NP_567246.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4263510|gb|AAD15336.1| hypothetical protein
           [Arabidopsis thaliana] gi|7269765|emb|CAB77765.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|21593748|gb|AAM65715.1| unknown [Arabidopsis
           thaliana] gi|115646844|gb|ABJ17137.1| At4g02800
           [Arabidopsis thaliana] gi|332656831|gb|AEE82231.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 333

 Score =  115 bits (288), Expect(2) = 1e-24
 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
 Frame = +1

Query: 31  KRKRLSKEYCLLLLRGFDXXXXXXXXXXXXXDTAMHGARELAKP-SLTEALHCD------ 189
           +R +  K   +LLL+GFD             D A+ G RELAKP S +E LH +      
Sbjct: 74  ERSKRFKNDSMLLLKGFDSVSHTLSLLSSNLDNALQGVRELAKPPSYSEILHSNLKADQI 133

Query: 190 --QEKTASDEVENKRGVKRKPNPHESSNNQEDHEEKEKEQSLESGKKAKNLAISMATKAA 363
             Q+K   +E E  +G KRK            +EE+++ +  +  KKAKN+AISMA KA 
Sbjct: 134 QRQQKEEDEEEEESKGKKRKHESDVEQTEDSSNEEEKRPKERKIMKKAKNIAISMAAKAN 193

Query: 364 TLARELRSIKSNFSFMQERCSMLEEENRRLKEGY 465
           +LAREL++IKS+ SF+QERC +LEEEN+RL++G+
Sbjct: 194 SLARELKTIKSDLSFIQERCGLLEEENKRLRDGF 227



 Score = 23.5 bits (49), Expect(2) = 1e-24
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 470 KGMRPEEDELI 502
           KG+RPEED+L+
Sbjct: 229 KGVRPEEDDLV 239


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