BLASTX nr result

ID: Coptis24_contig00006888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006888
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-56
emb|CBI30976.3| unnamed protein product [Vitis vinifera]              222   5e-56
ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 h...   222   5e-56
emb|CAN76115.1| hypothetical protein VITISV_026936 [Vitis vinifera]   221   2e-55
emb|CBI29149.3| unnamed protein product [Vitis vinifera]              220   2e-55

>ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|222853401|gb|EEE90948.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  224 bits (572), Expect = 1e-56
 Identities = 111/155 (71%), Positives = 122/155 (78%)
 Frame = -2

Query: 465 VNRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPE 286
           VNRCQIQEWYPKFK VSI+T+IHE+PE+FV YL DDSGPF+LP SISGEDALP RI+NP 
Sbjct: 6   VNRCQIQEWYPKFKPVSIRTVIHELPESFVEYLVDDSGPFLLPLSISGEDALPNRIHNPI 65

Query: 285 EEEDFQVXXXXXXXXXXXXXXXXXXEFELGIKESIRTLGGAVFPKLNWSAPKDSAWISTT 106
           +EED+QV                  E EL IKESI TLGGAVFPKLNWSAPKDSAWIST+
Sbjct: 66  DEEDYQVSEGPGDESEQPPLPPSFPELELNIKESINTLGGAVFPKLNWSAPKDSAWISTS 125

Query: 105 GNLRCTSFSEITLLLRSSVSLVHDFWHAYESCTDR 1
           G LRCTSFSEI LLLRSS SLVHD  HAY+SC D+
Sbjct: 126 GTLRCTSFSEIALLLRSSDSLVHDLCHAYDSCIDK 160


>emb|CBI30976.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score =  222 bits (566), Expect = 5e-56
 Identities = 109/155 (70%), Positives = 121/155 (78%)
 Frame = -2

Query: 465 VNRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPE 286
           VNRCQIQ+WYPKFKSVSIKTLIHE+PE+FV YL DD GPF+LP SI+ EDALP RI+NPE
Sbjct: 6   VNRCQIQDWYPKFKSVSIKTLIHELPESFVDYLLDDHGPFLLPVSITNEDALPNRIHNPE 65

Query: 285 EEEDFQVXXXXXXXXXXXXXXXXXXEFELGIKESIRTLGGAVFPKLNWSAPKDSAWISTT 106
           EEED+QV                  E EL IKESI  LGG+VFPKLNWSAPKDSAWISTT
Sbjct: 66  EEEDYQVLEGSGDEAEQPPSPPSFPELELKIKESIELLGGSVFPKLNWSAPKDSAWISTT 125

Query: 105 GNLRCTSFSEITLLLRSSVSLVHDFWHAYESCTDR 1
           G LRCTSFSEI LLLR+S SL+HD  HAY+SC D+
Sbjct: 126 GTLRCTSFSEIALLLRASDSLIHDLCHAYDSCIDK 160


>ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 homolog [Vitis vinifera]
          Length = 338

 Score =  222 bits (566), Expect = 5e-56
 Identities = 109/155 (70%), Positives = 121/155 (78%)
 Frame = -2

Query: 465 VNRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPE 286
           VNRCQIQ+WYPKFKSVSIKTLIHE+PE+FV YL DD GPF+LP SI+ EDALP RI+NPE
Sbjct: 6   VNRCQIQDWYPKFKSVSIKTLIHELPESFVDYLLDDHGPFLLPVSITNEDALPNRIHNPE 65

Query: 285 EEEDFQVXXXXXXXXXXXXXXXXXXEFELGIKESIRTLGGAVFPKLNWSAPKDSAWISTT 106
           EEED+QV                  E EL IKESI  LGG+VFPKLNWSAPKDSAWISTT
Sbjct: 66  EEEDYQVLEGSGDEAEQPPSPPSFPELELKIKESIELLGGSVFPKLNWSAPKDSAWISTT 125

Query: 105 GNLRCTSFSEITLLLRSSVSLVHDFWHAYESCTDR 1
           G LRCTSFSEI LLLR+S SL+HD  HAY+SC D+
Sbjct: 126 GTLRCTSFSEIALLLRASDSLIHDLCHAYDSCIDK 160


>emb|CAN76115.1| hypothetical protein VITISV_026936 [Vitis vinifera]
          Length = 336

 Score =  221 bits (562), Expect = 2e-55
 Identities = 109/155 (70%), Positives = 120/155 (77%)
 Frame = -2

Query: 465 VNRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPE 286
           VN CQIQEWYPKFKSVSIKTLIHE+PE+FV YL DD GPF+LP S+  EDALP RI+N E
Sbjct: 6   VNLCQIQEWYPKFKSVSIKTLIHELPESFVEYLLDDHGPFLLPASVINEDALPNRIHNXE 65

Query: 285 EEEDFQVXXXXXXXXXXXXXXXXXXEFELGIKESIRTLGGAVFPKLNWSAPKDSAWISTT 106
           EEED+QV                  E EL IKESI +LGGAVFPKLNWSAPKDSAWISTT
Sbjct: 66  EEEDYQVSEGSGDEAEQPPSPPSFPELELKIKESIESLGGAVFPKLNWSAPKDSAWISTT 125

Query: 105 GNLRCTSFSEITLLLRSSVSLVHDFWHAYESCTDR 1
           G LRCTSFSEI LLLRSS SL+HD  HAY+SC+D+
Sbjct: 126 GTLRCTSFSEIALLLRSSDSLIHDLCHAYDSCSDK 160


>emb|CBI29149.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  220 bits (561), Expect = 2e-55
 Identities = 109/155 (70%), Positives = 120/155 (77%)
 Frame = -2

Query: 465 VNRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPE 286
           VN CQIQEWYPKFKSVSIKTLIHE+PE+FV YL DD GPF+LP S+  EDALP RI+N E
Sbjct: 6   VNLCQIQEWYPKFKSVSIKTLIHELPESFVEYLLDDHGPFLLPVSVINEDALPNRIHNSE 65

Query: 285 EEEDFQVXXXXXXXXXXXXXXXXXXEFELGIKESIRTLGGAVFPKLNWSAPKDSAWISTT 106
           EEED+QV                  E EL IKESI +LGGAVFPKLNWSAPKDSAWISTT
Sbjct: 66  EEEDYQVSEGSGDEAEQPPSPPSFPELELKIKESIESLGGAVFPKLNWSAPKDSAWISTT 125

Query: 105 GNLRCTSFSEITLLLRSSVSLVHDFWHAYESCTDR 1
           G LRCTSFSEI LLLRSS SL+HD  HAY+SC+D+
Sbjct: 126 GTLRCTSFSEIALLLRSSDSLIHDLCHAYDSCSDK 160


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