BLASTX nr result
ID: Coptis24_contig00006887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006887
(1983 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|2... 171 2e-92
ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 h... 172 1e-91
ref|XP_003605701.1| Cell division cycle protein-like protein [Me... 170 1e-87
emb|CAN76115.1| hypothetical protein VITISV_026936 [Vitis vinifera] 167 4e-87
ref|XP_002276138.1| PREDICTED: cell division cycle protein 123 h... 167 5e-87
>ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|222853401|gb|EEE90948.1|
predicted protein [Populus trichocarpa]
Length = 336
Score = 171 bits (433), Expect(5) = 2e-92
Identities = 89/139 (64%), Positives = 101/139 (72%), Gaps = 6/139 (4%)
Frame = +3
Query: 687 MKEEEVNRCQIQEWYPKFKSVSIKTLIHELPETFVHQLRDDSGPFMLPQSISGEDALPRR 866
MKEE+VNRCQIQEWYPKFK VSI+T+IHELPE+FV L DDSGPF+LP SISGEDALP R
Sbjct: 1 MKEEDVNRCQIQEWYPKFKPVSIRTVIHELPESFVEYLVDDSGPFLLPLSISGEDALPNR 60
Query: 867 IYNPEEEEDFQVT---XXXXXXXXXXXXXXXXXLGIKESILV---ELFPKLNWSTPKDSA 1028
I+NP +EED+QV+ L IKESI +FPKLNWS PKDSA
Sbjct: 61 IHNPIDEEDYQVSEGPGDESEQPPLPPSFPELELNIKESINTLGGAVFPKLNWSAPKDSA 120
Query: 1029 WISTTGNLKCTSFSEITPL 1085
WIST+G L+CTSFSEI L
Sbjct: 121 WISTSGTLRCTSFSEIALL 139
Score = 127 bits (319), Expect(5) = 2e-92
Identities = 61/91 (67%), Positives = 73/91 (80%)
Frame = +1
Query: 1165 NIFLALRKWYSSFHAEMEFRCFVRNQHLIAVSQQ*VTEFYPVLLEKKCYLEILIQDFFEK 1344
+ FLALRKWYSSF EMEFRCFVR Q L+ +SQ+ VT FYP LLE+K LE+LI++FF +
Sbjct: 167 SFFLALRKWYSSFLPEMEFRCFVRGQQLVGISQREVTTFYPTLLEEKNDLELLIKEFFTE 226
Query: 1345 NVQ*KFESVNFAFDVYVTMYKRAKLLDFNPW 1437
NV+ KFES N+ FDVYVT RAK+LDFNPW
Sbjct: 227 NVRQKFESENYTFDVYVTKDGRAKILDFNPW 257
Score = 53.1 bits (126), Expect(5) = 2e-92
Identities = 29/53 (54%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 1443 FTLPLLXXXXXXXXXXXXXXXV-QFRVVESQCAI*PSLKTAVPYDYMDTSPGS 1598
FTLPLL V FR+VESQC I P LKTAVP DY+DT PGS
Sbjct: 260 FTLPLLFTWEELEQNLEEVENVVDFRIVESQCGIRPGLKTAVPQDYLDTGPGS 312
Score = 50.8 bits (120), Expect(5) = 2e-92
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 1082 LVRSSVSLVHDLWHAYESCTDRTPSRPPTFFL 1177
L+RSS SLVHDL HAY+SC D+T RPP+FFL
Sbjct: 139 LLRSSDSLVHDLCHAYDSCIDKTLLRPPSFFL 170
Score = 28.9 bits (63), Expect(5) = 2e-92
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 1601 GWDQFLRRAYEELRMQDTHKG 1663
GWDQFLR+A +EL+ Q G
Sbjct: 313 GWDQFLRKADKELQQQKMAPG 333
>ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 homolog [Glycine max]
Length = 332
Score = 172 bits (435), Expect(5) = 1e-91
Identities = 85/139 (61%), Positives = 100/139 (71%), Gaps = 5/139 (3%)
Frame = +3
Query: 687 MKEEEVNRCQIQEWYPKFKSVSIKTLIHELPETFVHQLRDDSGPFMLPQSISGEDALPRR 866
M+EEEVNRCQIQEWYPKFKSVS KTLIH+LPE+F+ L DDSGPF+LP S+ EDALP R
Sbjct: 1 MEEEEVNRCQIQEWYPKFKSVSFKTLIHQLPESFIQYLLDDSGPFLLPDSVLNEDALPNR 60
Query: 867 IYNPEEEEDFQVTXXXXXXXXXXXXXXXXXLGIK-----ESILVELFPKLNWSTPKDSAW 1031
I+NP+EEEDFQV+ L +K ES+ +FPKLNWS PKDSAW
Sbjct: 61 IHNPDEEEDFQVSEGSGDEAEASAPPSFPELELKIKDFIESLGGAVFPKLNWSAPKDSAW 120
Query: 1032 ISTTGNLKCTSFSEITPLY 1088
IST+G L+C SFSEI L+
Sbjct: 121 ISTSGTLRCISFSEIALLF 139
Score = 120 bits (302), Expect(5) = 1e-91
Identities = 59/91 (64%), Positives = 68/91 (74%)
Frame = +1
Query: 1165 NIFLALRKWYSSFHAEMEFRCFVRNQHLIAVSQQ*VTEFYPVLLEKKCYLEILIQDFFEK 1344
N FLALRKWY S +MEFRCFVRNQ LI +SQ+ VT FYPVLLEKK L LIQ FF
Sbjct: 166 NFFLALRKWYPSLQPDMEFRCFVRNQKLIGISQREVTTFYPVLLEKKNDLLFLIQAFFIN 225
Query: 1345 NVQ*KFESVNFAFDVYVTMYKRAKLLDFNPW 1437
+V+ KFES N+ FDVY+T R K++DFNPW
Sbjct: 226 HVRAKFESENYTFDVYITKDDRVKIVDFNPW 256
Score = 56.6 bits (135), Expect(5) = 1e-91
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +3
Query: 1443 FTLPLLXXXXXXXXXXXXXXXVQFRVVESQCAI*PSLKTAVPYDYMDTSPGS 1598
FTL LL V+FR+VE +CA+ P LKTAVP+DY+DTSPGS
Sbjct: 259 FTLSLLFTWDELDHIHSEGNDVEFRIVEDRCAVRPGLKTAVPFDYLDTSPGS 310
Score = 45.8 bits (107), Expect(5) = 1e-91
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +2
Query: 1082 LVRSSVSLVHDLWHAYESCTDRTPSRPPTFFL 1177
L R+S SLVHDL HAY+SC D++ +RP FFL
Sbjct: 138 LFRASDSLVHDLCHAYDSCQDKSSTRPQNFFL 169
Score = 33.5 bits (75), Expect(5) = 1e-91
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +2
Query: 1601 GWDQFLRRAYEELRMQDTHKG 1663
GWDQFLR A EELR Q T G
Sbjct: 311 GWDQFLRNADEELRRQSTGAG 331
>ref|XP_003605701.1| Cell division cycle protein-like protein [Medicago truncatula]
gi|355506756|gb|AES87898.1| Cell division cycle
protein-like protein [Medicago truncatula]
Length = 338
Score = 170 bits (430), Expect(5) = 1e-87
Identities = 85/141 (60%), Positives = 104/141 (73%), Gaps = 6/141 (4%)
Frame = +3
Query: 684 NMKEEEVNRCQIQEWYPKFKSVSIKTLIHELPETFVHQLRDDSGPFMLPQSISGEDALPR 863
N+KEEEVNRCQIQEWYP FKSVSIKTLIH+LPE+F+ L DDSGPF+LP S+ EDALP
Sbjct: 3 NIKEEEVNRCQIQEWYPIFKSVSIKTLIHQLPESFIQYLLDDSGPFLLPVSVLNEDALPN 62
Query: 864 RIYNPEEEEDFQV---TXXXXXXXXXXXXXXXXXLGIKESILV---ELFPKLNWSTPKDS 1025
RI+NP +EEDFQV + L +KES+ + +FPKLNWS+PKDS
Sbjct: 63 RIHNPTDEEDFQVSEESEDEAEESSPPPSFPELELQVKESVKLLGGAVFPKLNWSSPKDS 122
Query: 1026 AWISTTGNLKCTSFSEITPLY 1088
AWIST+G+L+CT+FSEI L+
Sbjct: 123 AWISTSGSLRCTTFSEIALLF 143
Score = 118 bits (295), Expect(5) = 1e-87
Identities = 56/91 (61%), Positives = 68/91 (74%)
Frame = +1
Query: 1165 NIFLALRKWYSSFHAEMEFRCFVRNQHLIAVSQQ*VTEFYPVLLEKKCYLEILIQDFFEK 1344
N FLALRKWY S EMEFRCFVRNQ L+ +SQ+ VT FYP+LLEKK L + IQ FF
Sbjct: 170 NFFLALRKWYPSLKPEMEFRCFVRNQKLVGISQREVTTFYPILLEKKNGLLLQIQGFFNN 229
Query: 1345 NVQ*KFESVNFAFDVYVTMYKRAKLLDFNPW 1437
+V+ KFES N+ FDVY+T +R K++DFN W
Sbjct: 230 HVRTKFESENYVFDVYITNDERVKIVDFNTW 260
Score = 48.1 bits (113), Expect(5) = 1e-87
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +2
Query: 1082 LVRSSVSLVHDLWHAYESCTDRTPSRPPTFFL 1177
L RSS SLVHDL HAY+SC D++ SRP FFL
Sbjct: 142 LFRSSDSLVHDLCHAYDSCNDKSSSRPHNFFL 173
Score = 48.1 bits (113), Expect(5) = 1e-87
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 1506 VQFRVVESQCAI*PSLKTAVPYDYMDTSPGS 1598
V+FR+VE C + P LKTAVP+DY+DTS GS
Sbjct: 285 VEFRIVEDYCGVRPGLKTAVPHDYLDTSQGS 315
Score = 30.4 bits (67), Expect(5) = 1e-87
Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 1601 GWDQFLRRAY-EELRMQDTHKG 1663
GWDQFLR A EELR Q T G
Sbjct: 316 GWDQFLRNAADEELRQQSTEAG 337
>emb|CAN76115.1| hypothetical protein VITISV_026936 [Vitis vinifera]
Length = 336
Score = 167 bits (424), Expect(5) = 4e-87
Identities = 89/139 (64%), Positives = 98/139 (70%), Gaps = 6/139 (4%)
Frame = +3
Query: 687 MKEEEVNRCQIQEWYPKFKSVSIKTLIHELPETFVHQLRDDSGPFMLPQSISGEDALPRR 866
MK+EEVN CQIQEWYPKFKSVSIKTLIHELPE+FV L DD GPF+LP S+ EDALP R
Sbjct: 1 MKQEEVNLCQIQEWYPKFKSVSIKTLIHELPESFVEYLLDDHGPFLLPASVINEDALPNR 60
Query: 867 IYNPEEEEDFQV---TXXXXXXXXXXXXXXXXXLGIKESILV---ELFPKLNWSTPKDSA 1028
I+N EEEED+QV + L IKESI +FPKLNWS PKDSA
Sbjct: 61 IHNXEEEEDYQVSEGSGDEAEQPPSPPSFPELELKIKESIESLGGAVFPKLNWSAPKDSA 120
Query: 1029 WISTTGNLKCTSFSEITPL 1085
WISTTG L+CTSFSEI L
Sbjct: 121 WISTTGTLRCTSFSEIALL 139
Score = 116 bits (291), Expect(5) = 4e-87
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +1
Query: 1165 NIFLALRKWYSSFHAEMEFRCFVRNQHLIAVSQQ*VTEFYPVLLEKKCYLEILIQDFFEK 1344
N +LALRKWY S EMEFRCFVR++ L+ +SQ+ VT FYP LLEKK LE++I++FF
Sbjct: 167 NFYLALRKWYPSLRPEMEFRCFVRDRLLVGISQREVTGFYPALLEKKSALEVVIREFFMD 226
Query: 1345 NVQ*KFESVNFAFDVYVTMYKRAKLLDFNPW 1437
V FE N+ FDVYVTM R KL+DFNPW
Sbjct: 227 KVSQTFELENYTFDVYVTMDDRVKLVDFNPW 257
Score = 51.2 bits (121), Expect(5) = 4e-87
Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 1443 FTLPLLXXXXXXXXXXXXXXX-VQFRVVESQCAI*PSLKTAVPYDYMDTSPGS 1598
FTLPLL V+FR+VESQ A+ P LKTAVPYDY+ T PGS
Sbjct: 260 FTLPLLFTWEELEQXCAEEGHGVEFRIVESQSAVRPGLKTAVPYDYLATGPGS 312
Score = 50.4 bits (119), Expect(5) = 4e-87
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 1082 LVRSSVSLVHDLWHAYESCTDRTPSRPPTFFL 1177
L+RSS SL+HDL HAY+SC+D++ SRPP F+L
Sbjct: 139 LLRSSDSLIHDLCHAYDSCSDKSLSRPPNFYL 170
Score = 27.3 bits (59), Expect(5) = 4e-87
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 1601 GWDQFLRRAYEELRMQ 1648
GWDQFLR A +EL Q
Sbjct: 313 GWDQFLRNADQELERQ 328
>ref|XP_002276138.1| PREDICTED: cell division cycle protein 123 homolog [Vitis vinifera]
Length = 385
Score = 167 bits (423), Expect(5) = 5e-87
Identities = 89/139 (64%), Positives = 98/139 (70%), Gaps = 6/139 (4%)
Frame = +3
Query: 687 MKEEEVNRCQIQEWYPKFKSVSIKTLIHELPETFVHQLRDDSGPFMLPQSISGEDALPRR 866
MK+EEVN CQIQEWYPKFKSVSIKTLIHELPE+FV L DD GPF+LP S+ EDALP R
Sbjct: 1 MKQEEVNLCQIQEWYPKFKSVSIKTLIHELPESFVEYLLDDHGPFLLPVSVINEDALPNR 60
Query: 867 IYNPEEEEDFQV---TXXXXXXXXXXXXXXXXXLGIKESILV---ELFPKLNWSTPKDSA 1028
I+N EEEED+QV + L IKESI +FPKLNWS PKDSA
Sbjct: 61 IHNSEEEEDYQVSEGSGDEAEQPPSPPSFPELELKIKESIESLGGAVFPKLNWSAPKDSA 120
Query: 1029 WISTTGNLKCTSFSEITPL 1085
WISTTG L+CTSFSEI L
Sbjct: 121 WISTTGTLRCTSFSEIALL 139
Score = 116 bits (291), Expect(5) = 5e-87
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +1
Query: 1165 NIFLALRKWYSSFHAEMEFRCFVRNQHLIAVSQQ*VTEFYPVLLEKKCYLEILIQDFFEK 1344
N +LALRKWY S EMEFRCFVR++ L+ +SQ+ VT FYP LLEKK LE++I++FF
Sbjct: 167 NFYLALRKWYPSLRPEMEFRCFVRDRLLVGISQREVTGFYPALLEKKSALEVVIREFFMD 226
Query: 1345 NVQ*KFESVNFAFDVYVTMYKRAKLLDFNPW 1437
V FE N+ FDVYVTM R KL+DFNPW
Sbjct: 227 KVSQTFELENYTFDVYVTMDDRVKLVDFNPW 257
Score = 51.2 bits (121), Expect(5) = 5e-87
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 1443 FTLPLLXXXXXXXXXXXXXXX-VQFRVVESQCAI*PSLKTAVPYDYMDTSPGS 1598
FTLPLL V+FR+VESQ A+ P LKTAVPYDY+ T PGS
Sbjct: 260 FTLPLLFTWEELEQNCAEEGHGVEFRIVESQSAVRPGLKTAVPYDYLATGPGS 312
Score = 50.4 bits (119), Expect(5) = 5e-87
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 1082 LVRSSVSLVHDLWHAYESCTDRTPSRPPTFFL 1177
L+RSS SL+HDL HAY+SC+D++ SRPP F+L
Sbjct: 139 LLRSSDSLIHDLCHAYDSCSDKSLSRPPNFYL 170
Score = 27.3 bits (59), Expect(5) = 5e-87
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 1601 GWDQFLRRAYEELRMQ 1648
GWDQFLR A +EL Q
Sbjct: 313 GWDQFLRNADQELERQ 328