BLASTX nr result
ID: Coptis24_contig00006882
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006882
(1883 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15404.3| unnamed protein product [Vitis vinifera] 780 0.0
ref|XP_002317927.1| predicted protein [Populus trichocarpa] gi|2... 745 0.0
ref|NP_173291.4| BED zinc finger and hAT dimerization domain-con... 655 0.0
gb|AAF98418.1|AC026238_10 Hypothetical protein [Arabidopsis thal... 655 0.0
ref|XP_002457495.1| hypothetical protein SORBIDRAFT_03g008300 [S... 614 e-173
>emb|CBI15404.3| unnamed protein product [Vitis vinifera]
Length = 680
Score = 780 bits (2013), Expect = 0.0
Identities = 368/534 (68%), Positives = 451/534 (84%)
Frame = +2
Query: 2 SHPPATLDDEWLANSFKFVNSLVKIWSVEKFQTVILDVFRGMRENVRTSMEQIKSKISIT 181
S PP+TL+++WLANSFKF+N +++W EK++ V +VFR MRE+VR S+EQ+ SK+SIT
Sbjct: 148 SLPPSTLEEKWLANSFKFLNPSIQLWPGEKYKAVFREVFRSMREDVRASLEQVSSKVSIT 207
Query: 182 LDFWTSYEQVFYMSVTGHWIDENWVLRKILLDICHIPYPCCGTDIYHTLLKVLKMYNIEK 361
+DFWTSYEQ+FYMSVT HWIDENW +K+LLDICHIPYPC +IYH+L+KVLKMYNIE
Sbjct: 208 VDFWTSYEQIFYMSVTCHWIDENWCFQKVLLDICHIPYPCGSNEIYHSLIKVLKMYNIES 267
Query: 362 RILCCTHDNSQNAFNACHTLTKEDSDGQKTGSLCYIPCAARTLNLIIEDGLRTAKPVISK 541
++L CTHDNSQ A +ACH+L KED DGQK G CY+PCAARTLN+II+DGLRT KPVI+K
Sbjct: 268 KVLSCTHDNSQTAMHACHSL-KEDLDGQKVGPFCYLPCAARTLNMIIDDGLRTTKPVITK 326
Query: 542 IREFVLVMNTSPEISEDFKQITAAYQEGSWKFPIDTSTRWSGSYTMLDIVRKASKSIDGV 721
IREFVL MN+S EISEDF Q T YQEGSWK P+D S RWSG+Y MLDIV KA KS+D V
Sbjct: 327 IREFVLEMNSSSEISEDFIQFTTVYQEGSWKIPLDASARWSGNYQMLDIVCKAGKSMDAV 386
Query: 722 IRRHEDALGSRNVLLNPAERSNMNIMHAYLEPFYKTTNNICTSKVPTVGLVLFFMDHVIE 901
IR++E+ L R +LLNPAE++ +NI++AYLE FYK T N+ +KVPT+GLVLFFMDH+ E
Sbjct: 387 IRKYEETLSGR-MLLNPAEKNAVNIVYAYLEAFYKITLNMI-NKVPTIGLVLFFMDHISE 444
Query: 902 MIASCRDSRHTPDWLKSTADDMAKKARSYSSQVYNVFTYMAAILDPRIKTELVPENLNSD 1081
MIA CR+S +PDWLK+ A++MAKK RSYS+QV N+FTYM AILDPRIK EL+PE+LNS+
Sbjct: 445 MIAGCRESLRSPDWLKNAAEEMAKKTRSYSNQVCNIFTYMTAILDPRIKAELIPESLNSE 504
Query: 1082 SNLEDARSHFLRNYSSSLFPAITNGYSAQENEDGGSVSFAEEIARKRRKVNTSTSTDELT 1261
+NLE+AR+HF+RNYS++ FP+I +GYSAQE EDG SVSFAEEIARK+R+V+ ST+TDELT
Sbjct: 505 TNLEEARTHFMRNYSTNHFPSIASGYSAQEIEDGASVSFAEEIARKKRRVSMSTATDELT 564
Query: 1262 QYLSEPPAPFTTDVLDWWKGNTTRYPKLSVMARDFLAMQATAVSPEELFCGKGDEIDKQR 1441
QYLSEPPAP TDVL+WWK NTTRYP+LS MARDFLA+QAT+V+PEE+FCGKGDE+DKQR
Sbjct: 565 QYLSEPPAPIPTDVLEWWKVNTTRYPRLSTMARDFLAVQATSVAPEEVFCGKGDEMDKQR 624
Query: 1442 LCLPHASMQAILCTQSWTNSGFKLKYRSTEIDCEKLMESASAVTDNGTAVSENK 1603
+PH S QA+LC +SWT+ G KLKY+STEID E LME A+A DNGTA + K
Sbjct: 625 FSMPHDSTQALLCIRSWTHGGIKLKYKSTEIDYESLMELATAAADNGTAGFDKK 678
>ref|XP_002317927.1| predicted protein [Populus trichocarpa] gi|222858600|gb|EEE96147.1|
predicted protein [Populus trichocarpa]
Length = 680
Score = 745 bits (1923), Expect = 0.0
Identities = 353/534 (66%), Positives = 443/534 (82%)
Frame = +2
Query: 2 SHPPATLDDEWLANSFKFVNSLVKIWSVEKFQTVILDVFRGMRENVRTSMEQIKSKISIT 181
S PP+TL+++WLANSFKF+N +++W E+++ I +VFR M+E+V ++E++ SK+SI
Sbjct: 147 SLPPSTLEEKWLANSFKFLNPSIQLWPGERYKVKIREVFRSMQEDVMATLEKVSSKVSII 206
Query: 182 LDFWTSYEQVFYMSVTGHWIDENWVLRKILLDICHIPYPCCGTDIYHTLLKVLKMYNIEK 361
LDFW+SYEQ+FYMSVT WIDENW +++LLDIC IPYPC G++IYH+L KVLKMYNIE
Sbjct: 207 LDFWSSYEQIFYMSVTCQWIDENWSFQQVLLDICQIPYPCGGSEIYHSLEKVLKMYNIES 266
Query: 362 RILCCTHDNSQNAFNACHTLTKEDSDGQKTGSLCYIPCAARTLNLIIEDGLRTAKPVISK 541
R+L CTHDNSQNA +ACHTL KE+ DGQK G CYIPCAARTLNLIIEDGLRT KPVISK
Sbjct: 267 RVLSCTHDNSQNAIHACHTL-KEELDGQKLGMFCYIPCAARTLNLIIEDGLRTTKPVISK 325
Query: 542 IREFVLVMNTSPEISEDFKQITAAYQEGSWKFPIDTSTRWSGSYTMLDIVRKASKSIDGV 721
+REFVL +N+S ++SEDF Q+TAAYQEGSWKFP++TS RWSG+Y MLDIV KA KS+DGV
Sbjct: 326 VREFVLELNSSAKMSEDFIQLTAAYQEGSWKFPLETSARWSGNYQMLDIVCKAGKSMDGV 385
Query: 722 IRRHEDALGSRNVLLNPAERSNMNIMHAYLEPFYKTTNNICTSKVPTVGLVLFFMDHVIE 901
+R++E+ + R VL +PAE++ ++I+H YLEPFYKTTNNICT+K+ T+GLVLFFMDH+ E
Sbjct: 386 MRKYEETIVGRTVL-SPAEKNAVSIVHKYLEPFYKTTNNICTNKLLTIGLVLFFMDHISE 444
Query: 902 MIASCRDSRHTPDWLKSTADDMAKKARSYSSQVYNVFTYMAAILDPRIKTELVPENLNSD 1081
MI C+DSR + DWLK+ A+DMA K+RSY++QV N+F +M AILDPRIK EL+PE+L+S
Sbjct: 445 MITLCKDSRLSSDWLKNAAEDMATKSRSYTTQVGNIFIFMTAILDPRIKCELIPESLSSG 504
Query: 1082 SNLEDARSHFLRNYSSSLFPAITNGYSAQENEDGGSVSFAEEIARKRRKVNTSTSTDELT 1261
+ LE+AR+ F+RNYSSS F ++T+GY AQE EDGG VSFAEEIARK+R+V+ S +TDELT
Sbjct: 505 NYLEEARTLFIRNYSSSHFSSMTSGYGAQEIEDGGGVSFAEEIARKKRRVSLSNATDELT 564
Query: 1262 QYLSEPPAPFTTDVLDWWKGNTTRYPKLSVMARDFLAMQATAVSPEELFCGKGDEIDKQR 1441
QYLSEPPAP TDVL+WWK N+TRYP+LSVMARDFLA+Q T+V+PE+LFC KGDEIDKQR
Sbjct: 565 QYLSEPPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAVQPTSVAPEDLFCSKGDEIDKQR 624
Query: 1442 LCLPHASMQAILCTQSWTNSGFKLKYRSTEIDCEKLMESASAVTDNGTAVSENK 1603
C+PH S QAILC +SW G KLK +S EID E+LME A A T T + K
Sbjct: 625 FCMPHDSTQAILCIRSWMQGGIKLKCKSDEIDYERLMEMAGATTAENTVGLDKK 678
>ref|NP_173291.4| BED zinc finger and hAT dimerization domain-containing protein
[Arabidopsis thaliana] gi|332191608|gb|AEE29729.1| BED
zinc finger and hAT dimerization domain-containing
protein [Arabidopsis thaliana]
Length = 690
Score = 655 bits (1689), Expect = 0.0
Identities = 313/534 (58%), Positives = 422/534 (79%), Gaps = 5/534 (0%)
Frame = +2
Query: 2 SHPPATLDDEWLANSFKFVNSLVKIWSVEKFQTVILDVFRGMRENVRTSMEQIKSKISIT 181
S PP+T+D+ WL NSFKF+ +++W EK++ ++ +VF MR +V+T++E I+SK+S+T
Sbjct: 149 SLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVT 208
Query: 182 LDFWTSYEQVFYMSVTGHWIDENWVLRKILLDICHIPYPCCGTDIYHTLLKVLKMYNIEK 361
L FW SYE +FYMSVTG WIDENW ++LLDIC IPYP G++IY++LLKVLK Y IE
Sbjct: 209 LSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIED 268
Query: 362 RILCCTHDNSQNAFNACHTLTKEDSDGQKTGSLCYIPCAARTLNLIIEDGLRTAKPVISK 541
RILCCTHDNS+NA +ACH+L KE DGQK CYIPCAA+TLN II++GL T KP+ISK
Sbjct: 269 RILCCTHDNSENAIHACHSL-KEYFDGQKVLPFCYIPCAAQTLNDIIDEGLATIKPIISK 327
Query: 542 IREFVLVMNTSPEISEDFKQITAAYQEGSWKFPIDTSTRWSGSYTMLDIVRKASKSIDGV 721
+REF +N S E+S+DF Q+T AYQEG+WK PID S+RWSG+Y M++I+ KASKS+D V
Sbjct: 328 VREFTQELNASTELSDDFIQLTTAYQEGNWKLPIDASSRWSGNYQMVNILCKASKSLDSV 387
Query: 722 IRRHEDALGSRNVLLNPAERSNMNIMHAY--LEPFYKTTNNICTSKVPTVGLVLFFMDHV 895
IR++EDAL +R ++L+ E++ + I+H Y L+ F+KTTN++CT+K TVGL L FMD++
Sbjct: 388 IRKNEDALENR-MMLSSVEKNAVTIVHNYLDLDSFHKTTNDMCTNKDLTVGLALLFMDNI 446
Query: 896 IEMIASCRDSRHTPDWLKSTADDMAKKARSYSSQVYNVFTYMAAILDPRIKTELVPENLN 1075
EMI +C+ S H PDWL++ A+ MA+KARSY++QV NVFTY+ AILDPRIKTE +PE +N
Sbjct: 447 SEMITTCQKSCHNPDWLRTCAESMAQKARSYNTQVCNVFTYITAILDPRIKTEYIPETIN 506
Query: 1076 SDSNLEDARSHFLRNYSSSLF-PAITNGYSAQE-NEDGGSVSFAEEIARKRRKVNTSTS- 1246
+S +++ARSHF+RNYSSS F ++T+GY QE +E GG++SFAEEIAR++R+ + S +
Sbjct: 507 LESYIDEARSHFIRNYSSSHFTSSMTSGYRPQEVDEGGGNISFAEEIARRKRRGSMSNNV 566
Query: 1247 TDELTQYLSEPPAPFTTDVLDWWKGNTTRYPKLSVMARDFLAMQATAVSPEELFCGKGDE 1426
DELTQYLSE P TDVLDWWK N+ RYP+LS MARDFLA+QAT+ +PEE+FCGKG+E
Sbjct: 567 VDELTQYLSESIVPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEE 626
Query: 1427 IDKQRLCLPHASMQAILCTQSWTNSGFKLKYRSTEIDCEKLMESASAVTDNGTA 1588
IDKQ+ C+PH S Q+++C +SW +G KLKY+ +EID E+LME A+ V + +A
Sbjct: 627 IDKQKYCMPHDSTQSVICIRSWIEAGMKLKYKCSEIDYERLMELAATVAADNSA 680
>gb|AAF98418.1|AC026238_10 Hypothetical protein [Arabidopsis thaliana]
Length = 742
Score = 655 bits (1689), Expect = 0.0
Identities = 313/534 (58%), Positives = 422/534 (79%), Gaps = 5/534 (0%)
Frame = +2
Query: 2 SHPPATLDDEWLANSFKFVNSLVKIWSVEKFQTVILDVFRGMRENVRTSMEQIKSKISIT 181
S PP+T+D+ WL NSFKF+ +++W EK++ ++ +VF MR +V+T++E I+SK+S+T
Sbjct: 201 SLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVT 260
Query: 182 LDFWTSYEQVFYMSVTGHWIDENWVLRKILLDICHIPYPCCGTDIYHTLLKVLKMYNIEK 361
L FW SYE +FYMSVTG WIDENW ++LLDIC IPYP G++IY++LLKVLK Y IE
Sbjct: 261 LSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIED 320
Query: 362 RILCCTHDNSQNAFNACHTLTKEDSDGQKTGSLCYIPCAARTLNLIIEDGLRTAKPVISK 541
RILCCTHDNS+NA +ACH+L KE DGQK CYIPCAA+TLN II++GL T KP+ISK
Sbjct: 321 RILCCTHDNSENAIHACHSL-KEYFDGQKVLPFCYIPCAAQTLNDIIDEGLATIKPIISK 379
Query: 542 IREFVLVMNTSPEISEDFKQITAAYQEGSWKFPIDTSTRWSGSYTMLDIVRKASKSIDGV 721
+REF +N S E+S+DF Q+T AYQEG+WK PID S+RWSG+Y M++I+ KASKS+D V
Sbjct: 380 VREFTQELNASTELSDDFIQLTTAYQEGNWKLPIDASSRWSGNYQMVNILCKASKSLDSV 439
Query: 722 IRRHEDALGSRNVLLNPAERSNMNIMHAY--LEPFYKTTNNICTSKVPTVGLVLFFMDHV 895
IR++EDAL +R ++L+ E++ + I+H Y L+ F+KTTN++CT+K TVGL L FMD++
Sbjct: 440 IRKNEDALENR-MMLSSVEKNAVTIVHNYLDLDSFHKTTNDMCTNKDLTVGLALLFMDNI 498
Query: 896 IEMIASCRDSRHTPDWLKSTADDMAKKARSYSSQVYNVFTYMAAILDPRIKTELVPENLN 1075
EMI +C+ S H PDWL++ A+ MA+KARSY++QV NVFTY+ AILDPRIKTE +PE +N
Sbjct: 499 SEMITTCQKSCHNPDWLRTCAESMAQKARSYNTQVCNVFTYITAILDPRIKTEYIPETIN 558
Query: 1076 SDSNLEDARSHFLRNYSSSLF-PAITNGYSAQE-NEDGGSVSFAEEIARKRRKVNTSTS- 1246
+S +++ARSHF+RNYSSS F ++T+GY QE +E GG++SFAEEIAR++R+ + S +
Sbjct: 559 LESYIDEARSHFIRNYSSSHFTSSMTSGYRPQEVDEGGGNISFAEEIARRKRRGSMSNNV 618
Query: 1247 TDELTQYLSEPPAPFTTDVLDWWKGNTTRYPKLSVMARDFLAMQATAVSPEELFCGKGDE 1426
DELTQYLSE P TDVLDWWK N+ RYP+LS MARDFLA+QAT+ +PEE+FCGKG+E
Sbjct: 619 VDELTQYLSESIVPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEE 678
Query: 1427 IDKQRLCLPHASMQAILCTQSWTNSGFKLKYRSTEIDCEKLMESASAVTDNGTA 1588
IDKQ+ C+PH S Q+++C +SW +G KLKY+ +EID E+LME A+ V + +A
Sbjct: 679 IDKQKYCMPHDSTQSVICIRSWIEAGMKLKYKCSEIDYERLMELAATVAADNSA 732
>ref|XP_002457495.1| hypothetical protein SORBIDRAFT_03g008300 [Sorghum bicolor]
gi|241929470|gb|EES02615.1| hypothetical protein
SORBIDRAFT_03g008300 [Sorghum bicolor]
Length = 703
Score = 614 bits (1583), Expect = e-173
Identities = 285/528 (53%), Positives = 400/528 (75%), Gaps = 1/528 (0%)
Frame = +2
Query: 2 SHPPATLDDEWLANSFKFVNSLVKIWSVEKFQTVILDVFRGMRENVRTSMEQIKSKISIT 181
S PP+TLDD L +S K+++S V++W EK Q +IL+VFR M+E+V+ +++ I S++S+T
Sbjct: 172 SLPPSTLDDNMLIDSCKYLSSSVRLWPKEKVQEIILEVFRSMKEDVKETLQCISSRLSVT 231
Query: 182 LDFWTSYEQVFYMSVTGHWIDENWVLRKILLDICHIPYPCCGTDIYHTLLKVLKMYNIEK 361
LDFWTSYE++ YMS+ HWIDENWV +K+LLD+C IPYP G+ ++ L+ VL MYNI+
Sbjct: 232 LDFWTSYEKIVYMSIKCHWIDENWVSQKVLLDVCRIPYPSTGSKVFQVLMDVLVMYNIDS 291
Query: 362 RILCCTHDNSQNAFNACHTLTKEDSDGQKTGSLCYIPCAARTLNLIIEDGLRTAKPVISK 541
R+L CTH+NSQ + +AC +E + +K CYIPCAARTL IIE GL +P +SK
Sbjct: 292 RVLACTHNNSQRSIHACREFAQE-LESRKL-PFCYIPCAARTLKAIIEAGLENVEPTLSK 349
Query: 542 IREFVLVMNTSPEISEDFKQITAAYQEGSWKFPIDTSTRWSGSYTMLDIVRKASKSIDGV 721
IREF+L +N++ E+ EDFK T Y+E SWK P D S W+ Y MLD+V+KA +I+
Sbjct: 350 IREFILHINSNQEMMEDFKHWTEVYEEVSWKLPFDHSANWNNDYNMLDVVKKAPNAIENT 409
Query: 722 IRRHEDALGSRNVLLNPAERSNMNIMHAYLEPFYKTTNNICTSKVPTVGLVLFFMDHVIE 901
I++ E+ LG R+ +L AE+S ++++H+YLEPF+KTT N+C K+PT+GLV FFMDHV E
Sbjct: 410 IKKIEELLGPRDWVLTTAEKSVIDLLHSYLEPFFKTTTNLCNCKLPTLGLVFFFMDHVFE 469
Query: 902 MIASCRDSRHTPDWLKSTADDMAKKARSYSSQVYNVFTYMAAILDPRIKTELVPENLNSD 1081
+I C +S + WLK+ A DM+K+A ++++ YN++T+ AAILDPRIK EL+PE LNS
Sbjct: 470 LINLCHNSNNHQQWLKNIAGDMSKRAEKFTTEAYNIYTFTAAILDPRIKGELIPETLNST 529
Query: 1082 SNLEDARSHFLRNYSSSLFPAITNGYSAQE-NEDGGSVSFAEEIARKRRKVNTSTSTDEL 1258
SNLEDAR+HF+R+YSS+ F A+ NG+ AQ+ ED G+ SFAEEI RKRR+V+ +T+ DEL
Sbjct: 530 SNLEDARNHFVRDYSST-FQAVGNGHGAQDTTEDAGAFSFAEEIIRKRRRVSMTTAADEL 588
Query: 1259 TQYLSEPPAPFTTDVLDWWKGNTTRYPKLSVMARDFLAMQATAVSPEELFCGKGDEIDKQ 1438
+QYL+EPPAP +TD L+WW+G+++RYP+LS+MARDFLA+Q T++ PEELF KGD I KQ
Sbjct: 589 SQYLAEPPAPISTDALEWWRGHSSRYPRLSLMARDFLAIQGTSLDPEELFTSKGDNIHKQ 648
Query: 1439 RLCLPHASMQAILCTQSWTNSGFKLKYRSTEIDCEKLMESASAVTDNG 1582
+ CLP +SMQAI+C +SW SG++ ++ST ID ++L+ESA+ D G
Sbjct: 649 QYCLPLSSMQAIMCIKSWMQSGYQFNFQSTIIDFDRLVESAAPPDDIG 696