BLASTX nr result

ID: Coptis24_contig00006881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006881
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18975.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002284588.1| PREDICTED: probable receptor-like protein ki...    89   4e-16
ref|XP_003542144.1| PREDICTED: probable receptor-like protein ki...    87   1e-15
ref|XP_003543982.1| PREDICTED: probable receptor-like protein ki...    86   3e-15
ref|XP_002306651.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>emb|CBI18975.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
 Frame = +3

Query: 54  SVDAA-----IDFSYVETFPWDKSLCLD-NQTQCCQSLLSVFGIGLAQHLKDTNMFQLPN 215
           SVD+A     ID  YVET+PWD S C D +Q  CC +LLS+FG+GLAQHLK+T+MFQLP 
Sbjct: 20  SVDSASSSCPIDLGYVETYPWDTSSCRDGDQDHCCMALLSLFGMGLAQHLKETSMFQLPT 79

Query: 216 AISSSDCIRDFQTKXXXXXXXXXXXXXCF 302
           A  SS C+ + QT+             CF
Sbjct: 80  AAVSSSCLSELQTRLSAMAFQPSLVSLCF 108


>ref|XP_002284588.1| PREDICTED: probable receptor-like protein kinase At1g11050 [Vitis
           vinifera]
          Length = 612

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
 Frame = +3

Query: 54  SVDAA-----IDFSYVETFPWDKSLCLD-NQTQCCQSLLSVFGIGLAQHLKDTNMFQLPN 215
           SVD+A     ID  YVET+PWD S C D +Q  CC +LLS+FG+GLAQHLK+T+MFQLP 
Sbjct: 20  SVDSASSSCPIDLGYVETYPWDTSSCRDGDQDHCCMALLSLFGMGLAQHLKETSMFQLPT 79

Query: 216 AISSSDCIRDFQTKXXXXXXXXXXXXXCF 302
           A  SS C+ + QT+             CF
Sbjct: 80  AAVSSSCLSELQTRLSAMAFQPSLVSLCF 108


>ref|XP_003542144.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Glycine max]
          Length = 613

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = +3

Query: 54  SVDAAIDFSYVETFPWDKSLCLD--NQTQCCQSLLSVFGIGLAQHLKDTNMFQLPNAISS 227
           S    +D +YVETFPWD S C D  ++  CCQ LLSV GIGL+QHLK T++FQLPN   S
Sbjct: 26  SSSCPMDLNYVETFPWDSSSCRDPVDKNHCCQVLLSVIGIGLSQHLKQTSLFQLPNETIS 85

Query: 228 SDCIRDFQTKXXXXXXXXXXXXXCF 302
           S+C+ +FQ K             CF
Sbjct: 86  SNCLSNFQAKLTALSIDPSLVNSCF 110


>ref|XP_003543982.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Glycine max]
          Length = 558

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
 Frame = +3

Query: 12  NFPSLLFLACYCLVSVDAA---------IDFSYVETFPWDKSLCLD--NQTQCCQSLLSV 158
           N   LLFL  + +++  AA         I+F+YVETFPW+ S C +  N+  CC +L ++
Sbjct: 4   NVTILLFLPLFTILTTVAASNSSSSSCPINFTYVETFPWNTSSCTNPINKQPCCIALNTI 63

Query: 159 FGIGLAQHLKDTNMFQLPNAISSSDCIRDFQTKXXXXXXXXXXXXXCF 302
           F IGL QHLK+T++FQLPN  +SS C+ DFQTK             CF
Sbjct: 64  FHIGLTQHLKETSLFQLPNENTSSTCLSDFQTKLKALSIDLSLVPFCF 111


>ref|XP_002306651.1| predicted protein [Populus trichocarpa] gi|222856100|gb|EEE93647.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +3

Query: 69  IDFSYVETFPWDKSLCL--DNQTQCCQSLLSVFGIGLAQHLKDTNMFQLPNAISSSDCIR 242
           +D SYV+T PWD SLC   D    CCQ+LLS+FG+GLAQ L++T+MFQ PN  +SS C+ 
Sbjct: 36  VDLSYVQTVPWDTSLCRQPDGLEHCCQTLLSLFGMGLAQQLRETSMFQFPNLNASSACLS 95

Query: 243 DFQTKXXXXXXXXXXXXXCF 302
           DFQ K             CF
Sbjct: 96  DFQAKLATLSIDPSLVPSCF 115


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