BLASTX nr result

ID: Coptis24_contig00006880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006880
         (2263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chl...   140   5e-66
emb|CBI18108.3| unnamed protein product [Vitis vinifera]              140   5e-66
ref|XP_003623384.1| MATE efflux family protein expressed [Medica...   144   3e-59
ref|XP_004148605.1| PREDICTED: MATE efflux family protein 2, chl...   140   3e-59
gb|AAC28771.1| hypothetical protein [Arabidopsis thaliana]            141   1e-56

>ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chloroplastic [Vitis
           vinifera]
          Length = 561

 Score =  140 bits (352), Expect(2) = 5e-66
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = +2

Query: 2   YLIAVILLRQLSSKVLLVSPSISGRRIGRYLTSGGLLVGRTIAVLFTMTLATSMAARQGP 181
           YLIA +LL +L+ KV L+SP+I G RI +YL SGGLL+GRT+AVL TMTLATSMAA++GP
Sbjct: 316 YLIAFVLLWELNDKVFLISPNIDGMRIAQYLKSGGLLIGRTLAVLATMTLATSMAAKEGP 375

Query: 182 IPMAGHQICLQVWLAVSXXXXXXXXXXXXXXXSGYSQRDYIRAQDVIYKVLQV 340
           IPMAGHQICLQVWLA+S               SGYSQ +Y  AQ VIYKVL++
Sbjct: 376 IPMAGHQICLQVWLAISLLTDALALSGQALLASGYSQGNYEEAQQVIYKVLEM 428



 Score =  140 bits (352), Expect(2) = 5e-66
 Identities = 69/98 (70%), Positives = 83/98 (84%)
 Frame = +3

Query: 438 MIQIGLLTGVALAVMLFFGFETFSRLFTSDSAVLEITRSGVLFVAGSQPVNALAFVLDGL 617
           ++++GL TG+ALAV+LF GF  F+ LFT+D  VL I  SG+LFVAGSQP+NA+AFV+DGL
Sbjct: 425 VLEMGLATGIALAVILFLGFGAFASLFTTDLEVLGIAWSGILFVAGSQPMNAIAFVIDGL 484

Query: 618 YYGVSDFPYAAYSMVLVGLITSMFLYFAAPVYGLAGVW 731
           YYGVSDF YAAYSMVLV LI+S+FL  AAPV GLAGVW
Sbjct: 485 YYGVSDFGYAAYSMVLVALISSVFLLLAAPVCGLAGVW 522


>emb|CBI18108.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  140 bits (352), Expect(2) = 5e-66
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = +2

Query: 2   YLIAVILLRQLSSKVLLVSPSISGRRIGRYLTSGGLLVGRTIAVLFTMTLATSMAARQGP 181
           YLIA +LL +L+ KV L+SP+I G RI +YL SGGLL+GRT+AVL TMTLATSMAA++GP
Sbjct: 313 YLIAFVLLWELNDKVFLISPNIDGMRIAQYLKSGGLLIGRTLAVLATMTLATSMAAKEGP 372

Query: 182 IPMAGHQICLQVWLAVSXXXXXXXXXXXXXXXSGYSQRDYIRAQDVIYKVLQV 340
           IPMAGHQICLQVWLA+S               SGYSQ +Y  AQ VIYKVL++
Sbjct: 373 IPMAGHQICLQVWLAISLLTDALALSGQALLASGYSQGNYEEAQQVIYKVLEM 425



 Score =  140 bits (352), Expect(2) = 5e-66
 Identities = 69/98 (70%), Positives = 83/98 (84%)
 Frame = +3

Query: 438 MIQIGLLTGVALAVMLFFGFETFSRLFTSDSAVLEITRSGVLFVAGSQPVNALAFVLDGL 617
           ++++GL TG+ALAV+LF GF  F+ LFT+D  VL I  SG+LFVAGSQP+NA+AFV+DGL
Sbjct: 422 VLEMGLATGIALAVILFLGFGAFASLFTTDLEVLGIAWSGILFVAGSQPMNAIAFVIDGL 481

Query: 618 YYGVSDFPYAAYSMVLVGLITSMFLYFAAPVYGLAGVW 731
           YYGVSDF YAAYSMVLV LI+S+FL  AAPV GLAGVW
Sbjct: 482 YYGVSDFGYAAYSMVLVALISSVFLLLAAPVCGLAGVW 519


>ref|XP_003623384.1| MATE efflux family protein expressed [Medicago truncatula]
           gi|355498399|gb|AES79602.1| MATE efflux family protein
           expressed [Medicago truncatula]
          Length = 566

 Score =  144 bits (363), Expect(2) = 3e-59
 Identities = 71/98 (72%), Positives = 85/98 (86%)
 Frame = +3

Query: 438 MIQIGLLTGVALAVMLFFGFETFSRLFTSDSAVLEITRSGVLFVAGSQPVNALAFVLDGL 617
           +IQIGL  GVAL+++LFFGF  FS LF++DS VL++ +SG+ FVAGSQPVNALAFV+DGL
Sbjct: 433 VIQIGLGAGVALSMILFFGFGPFSSLFSTDSEVLDVAQSGIWFVAGSQPVNALAFVIDGL 492

Query: 618 YYGVSDFPYAAYSMVLVGLITSMFLYFAAPVYGLAGVW 731
           YYGVSDF YAAYSMVLVGLI+S+F+  AAPV GL GVW
Sbjct: 493 YYGVSDFEYAAYSMVLVGLISSVFMLVAAPVVGLPGVW 530



 Score =  113 bits (282), Expect(2) = 3e-59
 Identities = 58/113 (51%), Positives = 74/113 (65%)
 Frame = +2

Query: 2   YLIAVILLRQLSSKVLLVSPSISGRRIGRYLTSGGLLVGRTIAVLFTMTLATSMAARQGP 181
           YLIA ILL  LS KVLL+     G +   YL SGGLL+ RT+AV  TMTL TS+AA QGP
Sbjct: 324 YLIAFILLWNLSGKVLLIPFDFDGAKFFSYLKSGGLLIARTLAVFITMTLTTSLAANQGP 383

Query: 182 IPMAGHQICLQVWLAVSXXXXXXXXXXXXXXXSGYSQRDYIRAQDVIYKVLQV 340
           IPMAGHQIC++VWL++S               S YS  +Y +A+ +IY+V+Q+
Sbjct: 384 IPMAGHQICMEVWLSISLLTDALALAGQSLLASSYSLGNYEQARLIIYRVIQI 436


>ref|XP_004148605.1| PREDICTED: MATE efflux family protein 2, chloroplastic-like
           [Cucumis sativus] gi|449518737|ref|XP_004166392.1|
           PREDICTED: MATE efflux family protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 557

 Score =  140 bits (354), Expect(2) = 3e-59
 Identities = 66/97 (68%), Positives = 83/97 (85%)
 Frame = +3

Query: 441 IQIGLLTGVALAVMLFFGFETFSRLFTSDSAVLEITRSGVLFVAGSQPVNALAFVLDGLY 620
           +QIGL++G++LA++LF GF  FS LF++D+ VLE  RSG+LFVAGSQPVNALAFV+DGLY
Sbjct: 424 LQIGLISGISLAIILFLGFGAFSGLFSADAEVLETARSGLLFVAGSQPVNALAFVVDGLY 483

Query: 621 YGVSDFPYAAYSMVLVGLITSMFLYFAAPVYGLAGVW 731
           YGVSDF YAAYSMVLVGL++S++L    P +GL GVW
Sbjct: 484 YGVSDFGYAAYSMVLVGLVSSIYLLVVTPTFGLPGVW 520



 Score =  116 bits (291), Expect(2) = 3e-59
 Identities = 58/119 (48%), Positives = 80/119 (67%)
 Frame = +2

Query: 2   YLIAVILLRQLSSKVLLVSPSISGRRIGRYLTSGGLLVGRTIAVLFTMTLATSMAARQGP 181
           YLIA +LL +L+ ++     SI G RI RYL SGGLL+ RT+AVL T+TLATSMAAR+GP
Sbjct: 314 YLIAFVLLWRLNGEISFTLSSIDGGRIARYLQSGGLLMARTLAVLVTLTLATSMAAREGP 373

Query: 182 IPMAGHQICLQVWLAVSXXXXXXXXXXXXXXXSGYSQRDYIRAQDVIYKVLQVKNISSI 358
           +PMAG+QIC+Q+W+A+S                 ++ +DY  ++ VIY+ LQ+  IS I
Sbjct: 374 VPMAGYQICVQIWMAISLLTDALALAGQALLAGSFTLQDYEHSRQVIYRTLQIGLISGI 432


>gb|AAC28771.1| hypothetical protein [Arabidopsis thaliana]
          Length = 539

 Score =  141 bits (355), Expect(2) = 1e-56
 Identities = 68/98 (69%), Positives = 81/98 (82%)
 Frame = +3

Query: 438 MIQIGLLTGVALAVMLFFGFETFSRLFTSDSAVLEITRSGVLFVAGSQPVNALAFVLDGL 617
           ++Q+GL TG  LA +LF  FE FS LFT+DS VL+I  SG LFVAGSQPVNALAFVLDGL
Sbjct: 388 VLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNALAFVLDGL 447

Query: 618 YYGVSDFPYAAYSMVLVGLITSMFLYFAAPVYGLAGVW 731
           YYGVSDF +AAYSMV+VG I+S+F+  AAP +GLAG+W
Sbjct: 448 YYGVSDFGFAAYSMVIVGFISSLFMLVAAPTFGLAGIW 485



 Score =  107 bits (268), Expect(2) = 1e-56
 Identities = 57/113 (50%), Positives = 76/113 (67%)
 Frame = +2

Query: 2   YLIAVILLRQLSSKVLLVSPSISGRRIGRYLTSGGLLVGRTIAVLFTMTLATSMAARQGP 181
           YLIA ILL +L+  V+L+SP I   R  +YL SGGLL+GRT+A+L   TLATS+AA+ GP
Sbjct: 279 YLIAFILLWKLNENVVLLSPQIKVGRANQYLKSGGLLIGRTVALLVPFTLATSLAAQNGP 338

Query: 182 IPMAGHQICLQVWLAVSXXXXXXXXXXXXXXXSGYSQRDYIRAQDVIYKVLQV 340
             MAGHQI L++WLAVS               + YSQ +Y +A++V++ VLQV
Sbjct: 339 TQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQAREVLFGVLQV 391


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