BLASTX nr result
ID: Coptis24_contig00006874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006874
(1440 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf... 499 e-139
ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|2... 488 e-135
ref|XP_002521716.1| protein with unknown function [Ricinus commu... 474 e-131
ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransf... 463 e-128
gb|AAM19852.1| AT3g06540/F5E6_13 [Arabidopsis thaliana] gi|23463... 459 e-126
>ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A 2-like
[Vitis vinifera] gi|296088658|emb|CBI37649.3| unnamed
protein product [Vitis vinifera]
Length = 556
Score = 499 bits (1284), Expect = e-139
Identities = 258/434 (59%), Positives = 323/434 (74%), Gaps = 4/434 (0%)
Frame = -3
Query: 1438 KFNLDLSGPRVMFCADSAVELMLKSGASHHVEFKSIDASFIYSEEDGKLYTVPDSRSAIF 1259
KFNLD+SGPRV+FCAD+AV+LMLKSGAS ++EFKSIDASF+ + DG+ TVPDSR+AIF
Sbjct: 118 KFNLDVSGPRVLFCADAAVDLMLKSGASQYLEFKSIDASFV-CDADGRFSTVPDSRAAIF 176
Query: 1258 KDRTLGLMEKNQLMRFFKLVQKHIEFQKTQETDK--MISNDDLESPFVDFLTNQKLPPKI 1085
KDR+L L EKNQLMRFFKL+Q H+ E D IS DDLESPFV+FL +LPPKI
Sbjct: 177 KDRSLSLTEKNQLMRFFKLIQGHLAASDEAENDSNARISEDDLESPFVEFLNKMRLPPKI 236
Query: 1084 KSIILYAIAMADYDQESPELCKNLVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGE 905
KS+ILYAIAMADYDQ+S E+CK+++ TK GID LA+YHSSVGRF NALGALIYPIYGQGE
Sbjct: 237 KSMILYAIAMADYDQDSIEVCKDVLDTKIGIDRLALYHSSVGRFPNALGALIYPIYGQGE 296
Query: 904 LPQAFCRCAAVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXX 725
L QAFCR AAVKG +YVLRMPV ALL EKES KG+RLASGQD+FS KL+
Sbjct: 297 LTQAFCRRAAVKGCIYVLRMPVIALLMEKESGHCKGVRLASGQDIFSQKLLV-DPSFIVP 355
Query: 724 XXXXXXXSDLQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVT 545
D E+S + D +VAR +CI + S+ VSN + ++PPRSLYPEQ
Sbjct: 356 VPVAPSQPDCMPESSQVINLVDAKQKVARGICIMKSSLKPDVSNFVFVYPPRSLYPEQAM 415
Query: 544 SVRVLQLGSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTFSISESHDTSASEQ 365
++R +Q+GS L VCPSG+FVLYLS LC+DA QGKE + AAIK+L T +S + + S+S
Sbjct: 416 AIRAVQIGSNLGVCPSGMFVLYLSTLCNDATQGKELLQAAIKSLFTLPVSGNPENSSSVH 475
Query: 364 NESVEPT--TLLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDE 191
+E++E TLLWSA+Y Q L SF++ISS MPDGNL+Y +L++T KLFH++YP +E
Sbjct: 476 SENMEEVKPTLLWSALYTQELVMGSFESISSTSMPDGNLNYNVLLDATVKLFHQMYPQEE 535
Query: 190 FMPERNTTKDIADE 149
F PE + +++ D+
Sbjct: 536 FFPETTSPENVEDD 549
>ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|222832862|gb|EEE71339.1|
predicted protein [Populus trichocarpa]
Length = 553
Score = 488 bits (1256), Expect = e-135
Identities = 253/433 (58%), Positives = 330/433 (76%), Gaps = 3/433 (0%)
Frame = -3
Query: 1438 KFNLDLSGPRVMFCADSAVELMLKSGASHHVEFKSIDASFIYSEEDGKLYTVPDSRSAIF 1259
KFNLDL GPRV+FCAD +++LMLKSGAS++VEFKSIDASF+ + +GKL+ VPDSR+AIF
Sbjct: 117 KFNLDLCGPRVLFCADKSIDLMLKSGASNYVEFKSIDASFV-GDGNGKLWNVPDSRAAIF 175
Query: 1258 KDRTLGLMEKNQLMRFFKLVQKHIEFQKTQETD-KM-ISNDDLESPFVDFLTNQKLPPKI 1085
KD++L LMEKNQLMRFFKLVQ H+ T KM IS++DL+ PFV++L+ +LPPKI
Sbjct: 176 KDKSLTLMEKNQLMRFFKLVQGHLVATVGAGTSGKMKISDEDLQRPFVEYLSKMRLPPKI 235
Query: 1084 KSIILYAIAMADYDQESPELCKNLVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGE 905
+SIILYAIAMADYDQ+ +C+NL+ TKDGID LA+Y SSVGRFTNA GALIYPIYGQGE
Sbjct: 236 RSIILYAIAMADYDQDDMGVCQNLLKTKDGIDRLALYQSSVGRFTNASGALIYPIYGQGE 295
Query: 904 LPQAFCRCAAVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXX 725
LPQAF R +AVKG ++VLRMPV ALL EK+S YKG+RLASGQD+FS KLV
Sbjct: 296 LPQAFSRRSAVKGCIHVLRMPVTALLMEKDSGSYKGVRLASGQDIFSQKLV--LDPSFTL 353
Query: 724 XXXXXXXSDLQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVT 545
SDL E+ + +DV G+VAR +CITR S+ +SNLLV++PPRSLYPEQ+T
Sbjct: 354 ASPSASPSDLLHESFNFLSTRDVKGKVARGICITRNSLKPDMSNLLVVYPPRSLYPEQIT 413
Query: 544 SVRVLQLGSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTFSISESHDTSASEQ 365
S+R LQ+ LAVCP G+FVLYLSALCDDA QGK ++AA+ ALLTF + ++S++ Q
Sbjct: 414 SIRALQISGNLAVCPLGMFVLYLSALCDDAIQGKRLLNAAMNALLTFPDPVNSESSSTVQ 473
Query: 364 NESV-EPTTLLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDEF 188
+E+ E +++WS +Y+Q ++ FD+I+ PMPDGNL+Y ++L++ KLF ++YP++E
Sbjct: 474 SETTEEKPSVIWSGLYMQEMSTGQFDSINFAPMPDGNLNYNDILDAALKLFQEMYPNEEN 533
Query: 187 MPERNTTKDIADE 149
PE ++ D+
Sbjct: 534 FPETTPPENSEDD 546
>ref|XP_002521716.1| protein with unknown function [Ricinus communis]
gi|223539107|gb|EEF40703.1| protein with unknown function
[Ricinus communis]
Length = 551
Score = 474 bits (1221), Expect = e-131
Identities = 251/426 (58%), Positives = 318/426 (74%), Gaps = 6/426 (1%)
Frame = -3
Query: 1438 KFNLDLSGPRVMFCADSAVELMLKSGASHHVEFKSIDASFIYSEEDGKLYTVPDSRSAIF 1259
KF+LD+SGPRV++CAD++++LM+K+GA+ +VEFKSIDASF+ +E+GKL+ VPDSR+AIF
Sbjct: 115 KFSLDISGPRVLYCADNSIDLMIKTGANQYVEFKSIDASFV-GDENGKLWNVPDSRAAIF 173
Query: 1258 KDRTLGLMEKNQLMRFFKLVQKHIEFQKTQET----DKMISNDDLESPFVDFLTNQKLPP 1091
KD++L LMEKN+LMRFFKLVQ I + QE D IS DLESPFVDFL KL
Sbjct: 174 KDKSLSLMEKNRLMRFFKLVQSQIATNENQEQQEEEDVRISEQDLESPFVDFLNKMKLSS 233
Query: 1090 KIKSIILYAIAMADYDQESPELC-KNLVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYG 914
KIKSIILYAI MAD DQE+ K+L+ TKDGID LA+Y SS+GRFTNALGA IYPIYG
Sbjct: 234 KIKSIILYAIVMADCDQENTGGANKDLLKTKDGIDRLALYQSSIGRFTNALGAFIYPIYG 293
Query: 913 QGELPQAFCRCAAVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXX 734
QGELP AFCR AAVKG +YVLRMPV ALL +K + YKG+RLASGQ+++S KLV
Sbjct: 294 QGELPPAFCRRAAVKGCIYVLRMPVVALLMDKNNGNYKGIRLASGQEIYSQKLV-----L 348
Query: 733 XXXXXXXXXXSDLQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPE 554
SD E+ V+DV +VARA+CIT+ S+ SN L ++PPRSLYPE
Sbjct: 349 DPSFTVPSSPSDPLHESFCFLSVRDVKQKVARAICITKCSLKPDTSNFLAVYPPRSLYPE 408
Query: 553 QVTSVRVLQLGSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTFSISESHDTSA 374
Q TS+R LQ+G LAVCP+ +F+LYLSALCDD QGK+ ++ A+ ALL+ + SE+ ++ +
Sbjct: 409 QSTSIRALQMGGSLAVCPTNMFILYLSALCDDVHQGKKLLNTAMNALLSSTDSENPESCS 468
Query: 373 SEQNESVE-PTTLLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPD 197
+ Q E+ E + LLWSA+YIQ LT FD+ISS MPDGNLDY +VL+S +KLF K+YP+
Sbjct: 469 TGQTENTEVQSMLLWSALYIQELTTGQFDSISSTSMPDGNLDYNDVLDSAKKLFQKMYPN 528
Query: 196 DEFMPE 179
+EF PE
Sbjct: 529 EEFFPE 534
>ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransferase component A-like
[Glycine max]
Length = 553
Score = 463 bits (1191), Expect = e-128
Identities = 239/433 (55%), Positives = 311/433 (71%), Gaps = 1/433 (0%)
Frame = -3
Query: 1438 KFNLDLSGPRVMFCADSAVELMLKSGASHHVEFKSIDASFIYSEEDGKLYTVPDSRSAIF 1259
KFN+DL GPR +FCAD ++L++KSGA+ ++EFK ID SF+Y G L VPDSR AIF
Sbjct: 120 KFNIDLGGPRALFCADKTIDLLMKSGAAQYLEFKGIDESFVYEANAG-LANVPDSRGAIF 178
Query: 1258 KDRTLGLMEKNQLMRFFKLVQKHIEFQKTQETDKMISNDDLESPFVDFLTNQKLPPKIKS 1079
+D+ L L EKNQLMRFFKLVQ+H++ TQE + I +DLE PFV FL KLPPKIKS
Sbjct: 179 RDKKLSLKEKNQLMRFFKLVQQHLD--DTQE--EKIPKEDLEIPFVSFLEKMKLPPKIKS 234
Query: 1078 IILYAIAMADYDQESPELCKNLVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGELP 899
I+LYAIAM DYDQ++ E+C+ L+ TKDGID LA Y SSVGRF NA GAL+YPIYG+GELP
Sbjct: 235 ILLYAIAMLDYDQDNNEVCEELLKTKDGIDCLAQYSSSVGRFPNAPGALLYPIYGEGELP 294
Query: 898 QAFCRCAAVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXXXX 719
QAFCR AAVKG +YVLRMPV +LL +K + YKG+RLASGQD++S +L+
Sbjct: 295 QAFCRRAAVKGCIYVLRMPVVSLLMDKVTGSYKGVRLASGQDLYSHQLIL-DPSFTIPSP 353
Query: 718 XXXXXSDLQQETSDGSIVKDVDGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQVTSV 539
D E +D+ G VAR +CITR SI VS+ V++PPRSLYPEQVTS+
Sbjct: 354 LSLSLGDFPSERLQMLSQRDIKGMVARGICITRSSIKPDVSSCSVVYPPRSLYPEQVTSI 413
Query: 538 RVLQLGSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTFSISESHDTSASEQNE 359
+ LQ+GS LAVCP+G F+LYLS LC+DA +GK+ + AA+ ALLT +S + ++ S Q++
Sbjct: 414 KALQIGSNLAVCPAGTFILYLSTLCNDADEGKKLLKAAMNALLTLPVSGNSESIPSVQSD 473
Query: 358 SVE-PTTLLWSAIYIQPLTKFSFDTISSCPMPDGNLDYRNVLESTEKLFHKIYPDDEFMP 182
S + +LWSA YIQ L F+ ISS P PDGNL+Y +L++TEKLF+++YP++EF P
Sbjct: 474 SEDIKPIVLWSAFYIQKLIMSKFEFISSTPTPDGNLNYNALLDATEKLFNQMYPNEEFFP 533
Query: 181 ERNTTKDIADEQE 143
+ + +D DE +
Sbjct: 534 KATSPEDPTDEDD 546
>gb|AAM19852.1| AT3g06540/F5E6_13 [Arabidopsis thaliana] gi|23463085|gb|AAN33212.1|
At3g06540/F5E6_13 [Arabidopsis thaliana]
Length = 563
Score = 459 bits (1180), Expect = e-126
Identities = 236/438 (53%), Positives = 321/438 (73%), Gaps = 6/438 (1%)
Frame = -3
Query: 1438 KFNLDLSGPRVMFCADSAVELMLKSGASHHVEFKSIDASFIYSEEDGKLYTVPDSRSAIF 1259
+FN+DL+GPRV+FCAD ++ LMLKSGA+++VEFKSIDASF+ + G+L VPDSR+AIF
Sbjct: 119 RFNVDLAGPRVVFCADESINLMLKSGANNYVEFKSIDASFV-GDSSGELRNVPDSRAAIF 177
Query: 1258 KDRTLGLMEKNQLMRFFKLVQKHI--EFQKTQETDKMISNDDLESPFVDFLTNQKLPPKI 1085
KD++L L+EKNQLM+FFKLVQ H+ +K T IS +D+ESPFVDFL+ +LPPKI
Sbjct: 178 KDKSLTLLEKNQLMKFFKLVQSHLASSTEKDDSTTVKISEEDMESPFVDFLSKMRLPPKI 237
Query: 1084 KSIILYAIAMADYDQESPELCKNLVTTKDGIDSLAIYHSSVGRFTNALGALIYPIYGQGE 905
KSIILYAIAM DYDQ++ E C++L+ TK+GID LA+Y +S+GRF+NALGALIYPIYGQGE
Sbjct: 238 KSIILYAIAMLDYDQDNTETCRHLLKTKEGIDRLALYITSMGRFSNALGALIYPIYGQGE 297
Query: 904 LPQAFCRCAAVKGALYVLRMPVRALLFEKESRQYKGLRLASGQDVFSDKLVTGXXXXXXX 725
LPQAFCR AAVKG +YVLRMP+ ALL +KE+ YKG+RLASGQ++FS KL+
Sbjct: 298 LPQAFCRRAAVKGCIYVLRMPITALLLDKETGGYKGVRLASGQEIFSQKLIL-DPCVTVG 356
Query: 724 XXXXXXXSDLQQETSDGSIVKDV--DGQVARAVCITRGSIVSGVSNLLVIFPPRSLYPEQ 551
+D Q ET + + K + ++AR VC+ RGS+ + VSN LV++PP+SL+PEQ
Sbjct: 357 LESLSSLTDQQNETLNVLVPKSMINKEKIARGVCVIRGSVKANVSNALVVYPPKSLFPEQ 416
Query: 550 VTSVRVLQLGSGLAVCPSGLFVLYLSALCDDAAQGKESVHAAIKALLTFSISESHDTSAS 371
+T++RVLQLGSGLAVCP+ + VLYLS LCD+ QG +++ +A+ L++ + E+ + +
Sbjct: 417 LTAIRVLQLGSGLAVCPADMHVLYLSTLCDNDDQGIKALLSAMSNLISLPVPENRQSDSV 476
Query: 370 EQNESVE-PTTLLWSAIYIQPLTKFSF-DTISSCPMPDGNLDYRNVLESTEKLFHKIYPD 197
+N++ E LLW A+Y+Q L K F TISS P PDGNL+Y ++ES KL+ K+
Sbjct: 477 VENDTSETKPILLWRALYVQELVKGEFGGTISSMPSPDGNLNYNEIVESAVKLYEKLMGS 536
Query: 196 DEFMPERNTTKDIADEQE 143
+E E + + E+E
Sbjct: 537 EELFKEETSPAENTTEEE 554