BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006867
         (1916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   359   2e-96
emb|CBI27542.3| unnamed protein product [Vitis vinifera]              353   1e-94
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...   337   7e-90
emb|CBI40086.3| unnamed protein product [Vitis vinifera]              330   6e-88
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   330   6e-88

>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score =  359 bits (921), Expect = 2e-96
 Identities = 190/399 (47%), Positives = 251/399 (62%), Gaps = 26/399 (6%)
 Frame = -3

Query: 1884 NDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXNKTVMFP----VF 1717
            NDI+DLLPSDPFGM+++ TF AITG W +  ++D                 +F     ++
Sbjct: 54   NDILDLLPSDPFGMDISTTFTAITG-WLEDLEVDYGGYGTDEIGTSQGNYELFAGLNFIW 112

Query: 1716 GDIGMYECF------NNNNEDAVGFDGWVEEKGV-------------IQIQQISNGLSPT 1594
             +   ++        ++ ++ A GF G+ EEK V             +    +S+G    
Sbjct: 113  NNAMRFQALPGKAWLDDKSDIACGFGGFTEEKEVADPSYNCRFGPICVVEDVLSSGNENV 172

Query: 1593 TGAGASNIPNKEILEEVSGSCSSGDA---HEALFFAFGYMSVQDLLNVERVCKSFRSAVY 1423
             GA        E   E +GSC  GD    H A+ FA GY+ ++DLL+VERVC+S R+ V 
Sbjct: 173  CGASCQ----AEEFREFNGSCYDGDGAAPHAAVSFALGYLGLRDLLSVERVCRSLRATVQ 228

Query: 1422 GDPLLWRNICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPR 1243
             DPLLWR+I + QPLNERI DD L++LT RAQGNLQ L LV+C R+TD GLK VL+SNPR
Sbjct: 229  SDPLLWRSIHVDQPLNERITDDILLQLTRRAQGNLQGLHLVECPRITDDGLKRVLESNPR 288

Query: 1242 LTMLNVPECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDNC 1063
            LT L VP CTR+SI G+V+ L+A +S+G PG+KHLRIGG Y V H+HFEELK LL ID  
Sbjct: 289  LTKLCVPGCTRLSIEGVVNMLRAFQSTGTPGIKHLRIGGLYGVAHKHFEELKLLLGIDIH 348

Query: 1062 VRSKVSKPRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRA 883
             +    KP  Y+  +F    +DD  ID+E CPRC+NLRLVYDCP D C+V++++ Q CRA
Sbjct: 349  EQKNAHKPHFYNRGNFYLLGDDDRAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRA 408

Query: 882  CTICIPRCVQCGRCVLYADYVETFCLDILCLKCFELQKE 766
            CT+CI RCVQCGRC+   +Y ETFCL+ LC  CF+ Q +
Sbjct: 409  CTLCIARCVQCGRCINDGEYEETFCLEWLCSDCFKQQPQ 447


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  353 bits (905), Expect = 1e-94
 Identities = 187/376 (49%), Positives = 239/376 (63%), Gaps = 3/376 (0%)
 Frame = -3

Query: 1884 NDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXNKTVMFPVFGDIG 1705
            NDI+DLLPSDPFGM+++ TF AITG W +  ++D                          
Sbjct: 54   NDILDLLPSDPFGMDISTTFTAITG-WLEDLEVD-------------------------- 86

Query: 1704 MYECFNNNNEDAVGFDGWVEEKGVIQIQQISNGLSPTTGAGASNIPNKEILEEVSGSCSS 1525
             Y  F      A+    W+++K       I+ G       GAS     E   E +GSC  
Sbjct: 87   -YGGFQ-----ALPGKAWLDDKS-----DIACGSGNENVCGASC--QAEEFREFNGSCYD 133

Query: 1524 GDA---HEALFFAFGYMSVQDLLNVERVCKSFRSAVYGDPLLWRNICIHQPLNERIEDDG 1354
            GD    H A+ FA GY+ ++DLL+VERVC+S R+ V  DPLLWR+I + QPLNERI DD 
Sbjct: 134  GDGAAPHAAVSFALGYLGLRDLLSVERVCRSLRATVQSDPLLWRSIHVDQPLNERITDDI 193

Query: 1353 LVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVPECTRISIGGIVDSLKA 1174
            L++LT RAQGNLQ L LV+C R+TD GLK VL+SNPRLT L VP CTR+SI G+V+ L+A
Sbjct: 194  LLQLTRRAQGNLQGLHLVECPRITDDGLKRVLESNPRLTKLCVPGCTRLSIEGVVNMLRA 253

Query: 1173 LRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDNCVRSKVSKPRIYHGHSFPSYDEDD 994
             +S+G PG+KHLRIGG Y V H+HFEELK LL ID   +    KP  Y+  +F    +DD
Sbjct: 254  FQSTGTPGIKHLRIGGLYGVAHKHFEELKLLLGIDIHEQKNAHKPHFYNRGNFYLLGDDD 313

Query: 993  HDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPRCVQCGRCVLYADYVET 814
              ID+E CPRC+NLRLVYDCP D C+V++++ Q CRACT+CI RCVQCGRC+   +Y ET
Sbjct: 314  RAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRACTLCIARCVQCGRCINDGEYEET 373

Query: 813  FCLDILCLKCFELQKE 766
            FCL+ LC  CF+ Q +
Sbjct: 374  FCLEWLCSDCFKQQPQ 389


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  337 bits (864), Expect = 7e-90
 Identities = 184/404 (45%), Positives = 250/404 (61%), Gaps = 36/404 (8%)
 Frame = -3

Query: 1881 DIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXNKTVMFPVFGDIGM 1702
            DI+DLLPSDPFGM+++ TF A+TG W +  ++D              +   + +F D+  
Sbjct: 51   DILDLLPSDPFGMDISTTFTAVTG-WLEDLEVD---YGGYGRDRVSTRDGNYQLFADLNF 106

Query: 1701 -------YECFNNNNEDAVGFD------GWVEEKGVIQIQQISNG-----------LSPT 1594
                   ++ F  N    +GFD      G+ +E+   +  ++ N            +   
Sbjct: 107  ICNNAMWFQQFPGN----MGFDLSNVVGGYGDERS--EANEVGNAPHQEAPGSDCDMEDV 160

Query: 1593 TGAGASNIPNKEI--LEEVSGS-------CSSGDA---HEALFFAFGYMSVQDLLNVERV 1450
               G   I N+ +  ++E SG        CS GD    H A  FA GY+ V+DLL VE V
Sbjct: 161  LSPGNEIIDNETVGVVDESSGEFQNGHLVCSEGDKEAPHAAFAFALGYLGVRDLLVVETV 220

Query: 1449 CKSFRSAVYGDPLLWRNICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGL 1270
            C+S RS V  DPLLWR+I I QPLNE+I DD L++LT RAQGNLQ LSLV+C R+TD GL
Sbjct: 221  CRSLRSTVQSDPLLWRSIHIDQPLNEKITDDVLLQLTNRAQGNLQCLSLVECPRITDDGL 280

Query: 1269 KCVLQSNPRLTMLNVPECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEEL 1090
            K VL++NPRLT L+VP CTR+SI GIV SLKA +++G  G+KHLRIGG Y VT +HFEEL
Sbjct: 281  KHVLENNPRLTKLSVPACTRLSIEGIVTSLKAFKATGTHGVKHLRIGGLYGVTQKHFEEL 340

Query: 1089 KALLNIDNCVRSKVSKPRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVR 910
              LL  D+ ++    KP  YH  +     EDD  ID+E+CPRC+NLRL+YDCPV+ C+ +
Sbjct: 341  MFLLGPDSHIQQNAHKPHFYHRGNLYLSCEDDRAIDIEMCPRCQNLRLIYDCPVEGCQGK 400

Query: 909  QSSPQSCRACTICIPRCVQCGRCVLYADYVETFCLDILCLKCFE 778
            +   Q+CRAC++CI RCVQCGRC+  ++Y ETFCL++LC  C++
Sbjct: 401  EHPSQACRACSLCIARCVQCGRCINDSEYEETFCLELLCSDCWK 444


>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  330 bits (847), Expect = 6e-88
 Identities = 185/412 (44%), Positives = 244/412 (59%), Gaps = 26/412 (6%)
 Frame = -3

Query: 1884 NDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXNKTVMFPVFGDIG 1705
            +DI+D LP+DPF M++  TF A  G W   F+ D++               M     D G
Sbjct: 67   DDIVDRLPADPFNMDIRTTFTAFKG-WVGDFEKDSIGFGVGEME------AMEAEGEDRG 119

Query: 1704 MYECFN-------------NNNEDAVG---FDGWVEEKGVIQIQQISNGLSPTTGAGASN 1573
            +Y   N             +N E +V    FDG + +K +      S  LS +      N
Sbjct: 120  LYANLNLVWSGAMRFQPEFSNAEKSVPCNEFDGLLMDKDLCD-GGFSEFLSFSRHGNRIN 178

Query: 1572 IPNKEILE---EVSGSCSSGDAHEALFFAFGYMSVQDLLNVERVCKSFRSAVYGDPLLWR 1402
               ++  +   +V     +G+ H+ALFF+  Y+ VQDLL VERVC+S  + V  DPLLWR
Sbjct: 179  GNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRSDPLLWR 238

Query: 1401 NICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVP 1222
            NICI QPL+++I DD L++LTGRAQG+LQ LSLV+C R+TD GLK VL++NPRLT L VP
Sbjct: 239  NICIDQPLSDKITDDALLQLTGRAQGSLQGLSLVQCPRITDSGLKRVLENNPRLTKLCVP 298

Query: 1221 ECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDNCVRSKVSK 1042
             C R+S+  I+ +LKA +S+G  G+KHLRI G   VT +HFEELK LL +DN  + +  K
Sbjct: 299  GCVRLSVDCILLNLKAFKSAGTLGIKHLRISGLNGVTDQHFEELKLLLGVDNHKQLRTHK 358

Query: 1041 PRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPR 862
            PR YHG       +DD  ID+E+CPRC+ +RLVYDCP + C+ +  S Q CRACT+CI R
Sbjct: 359  PRFYHGEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIAR 418

Query: 861  CVQCGRCVLYADYVETFCLDILCLKCF-------ELQKEERGASSNHISLDQ 727
            C  CGRC+   DY ETFCLD+LCL CF       E Q+E    SS H    Q
Sbjct: 419  CFHCGRCINDCDYEETFCLDLLCLDCFKQLLNCQERQEEMGAPSSKHTIFHQ 470


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score =  330 bits (847), Expect = 6e-88
 Identities = 185/412 (44%), Positives = 244/412 (59%), Gaps = 26/412 (6%)
 Frame = -3

Query: 1884 NDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXNKTVMFPVFGDIG 1705
            +DI+D LP+DPF M++  TF A  G W   F+ D++               M     D G
Sbjct: 67   DDIVDRLPADPFNMDIRTTFTAFKG-WVGDFEKDSIGFGVGEME------AMEAEGEDRG 119

Query: 1704 MYECFN-------------NNNEDAVG---FDGWVEEKGVIQIQQISNGLSPTTGAGASN 1573
            +Y   N             +N E +V    FDG + +K +      S  LS +      N
Sbjct: 120  LYANLNLVWSGAMRFQPEFSNAEKSVPCNEFDGLLMDKDLCD-GGFSEFLSFSRHGNRIN 178

Query: 1572 IPNKEILE---EVSGSCSSGDAHEALFFAFGYMSVQDLLNVERVCKSFRSAVYGDPLLWR 1402
               ++  +   +V     +G+ H+ALFF+  Y+ VQDLL VERVC+S  + V  DPLLWR
Sbjct: 179  GNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRSDPLLWR 238

Query: 1401 NICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVP 1222
            NICI QPL+++I DD L++LTGRAQG+LQ LSLV+C R+TD GLK VL++NPRLT L VP
Sbjct: 239  NICIDQPLSDKITDDALLQLTGRAQGSLQGLSLVQCPRITDSGLKRVLENNPRLTKLCVP 298

Query: 1221 ECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDNCVRSKVSK 1042
             C R+S+  I+ +LKA +S+G  G+KHLRI G   VT +HFEELK LL +DN  + +  K
Sbjct: 299  GCVRLSVDCILLNLKAFKSAGTLGIKHLRISGLNGVTDQHFEELKLLLGVDNHKQLRTHK 358

Query: 1041 PRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPR 862
            PR YHG       +DD  ID+E+CPRC+ +RLVYDCP + C+ +  S Q CRACT+CI R
Sbjct: 359  PRFYHGEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIAR 418

Query: 861  CVQCGRCVLYADYVETFCLDILCLKCF-------ELQKEERGASSNHISLDQ 727
            C  CGRC+   DY ETFCLD+LCL CF       E Q+E    SS H    Q
Sbjct: 419  CFHCGRCINDCDYEETFCLDLLCLDCFKQLLNCQERQEEMGAPSSKHTIFHQ 470