BLASTX nr result

ID: Coptis24_contig00006851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006851
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268304.1| PREDICTED: uncharacterized protein LOC100261...   126   1e-26
emb|CBI39111.3| unnamed protein product [Vitis vinifera]              118   3e-24
ref|XP_002524087.1| conserved hypothetical protein [Ricinus comm...   102   2e-19
ref|XP_004161285.1| PREDICTED: uncharacterized LOC101210898 [Cuc...    96   3e-17
ref|NP_001143101.1| uncharacterized protein LOC100275578 [Zea ma...    94   1e-16

>ref|XP_002268304.1| PREDICTED: uncharacterized protein LOC100261548 [Vitis vinifera]
          Length = 613

 Score =  126 bits (317), Expect = 1e-26
 Identities = 108/378 (28%), Positives = 171/378 (45%), Gaps = 12/378 (3%)
 Frame = +3

Query: 3    TIATMDIKLDFVPPSLLNFVSRQLIGSGFKLYKKTVASIAKGDEVFSKALEAPVYVHVRE 182
            TIA MDIKLDFVPPSL+NF+SRQL+GSGF+LY+K V+S  +G+E F +AL  P+Y  +RE
Sbjct: 257  TIANMDIKLDFVPPSLINFISRQLVGSGFRLYQKIVSSATEGNEDFHEALGGPLYTRIRE 316

Query: 183  GLDPKNKLKSTRKPESLERDKSAGSC----VEGLATVIPPVDTMVLEQIPLGDSHLSSQA 350
             L    K       E L+ D +        VE +   +  ++  +L   P  +S   S++
Sbjct: 317  ALCSNAKPTEALGLEELKIDDACTHAEEYLVETVQADVKDINQRILRDDPAAES--PSES 374

Query: 351  GTAVTGQTYNCEIEEVEAGTETQTMEKCQTSHQXXXXXXXXXXXXXXXXXXXHCSTNITV 530
                 G+T+ CEI+E     ET+     +  ++                       +   
Sbjct: 375  FPVAEGKTF-CEIQE----EETEEGGHLKGDNKGVDPPPISPGVMKDCNGIDLAPKDQMA 429

Query: 531  DRC--SAEKTSISPEVEHALRVLDNAISMVRKGFSFE-----WSGFGSKNQDVLHVQKAA 689
            ++C  + +   +SP+VE AL  L+  IS++R GF  +      S F ++  + L      
Sbjct: 430  EKCPVNDKGVCVSPKVEEALGTLEEIISVIR-GFGHDTQSNFLSIFANEGSN-LEKDALK 487

Query: 690  XXXXXXXXXXXXDGEDCQKAPKVDKMXXXXXXXXXXXXXXXIRHNNQDSPVWEVNHNKIT 869
                        +GE C K  +   +                R+   +S   EVNHN+I 
Sbjct: 488  RTISSADGRVHSNGEVCVKPSENGTVERTSVEPRNSPGTQNSRYTGSNSQSREVNHNRIA 547

Query: 870  PPSPKQNSTPMVITQEDSWNSSQNGGVLEVPALDKMSSVDKEVTIWSNDAHDIHEGSDNG 1049
            P SP+QN      TQ+ + + S+N  V+E P L    + +  V++            D G
Sbjct: 548  PASPEQNLLSPCETQQVALHLSRN-EVMERPMLKTSDNSEANVSV------------DEG 594

Query: 1050 REYTKKKQRR-CCLYFFS 1100
            ++  ++K+R  CC  F S
Sbjct: 595  QKLNRQKKRGFCCFNFIS 612


>emb|CBI39111.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  118 bits (296), Expect = 3e-24
 Identities = 105/376 (27%), Positives = 160/376 (42%), Gaps = 10/376 (2%)
 Frame = +3

Query: 3    TIATMDIKLDFVPPSLLNFVSRQLIGSGFKLYKKTVASIAKGDEVFSKALEAPVYVHVRE 182
            TIA MDIKLDFVPPSL+NF+SRQL+GSGF+LY+K V+S  +G+E F +AL  P+Y  +RE
Sbjct: 250  TIANMDIKLDFVPPSLINFISRQLVGSGFRLYQKIVSSATEGNEDFHEALGGPLYTRIRE 309

Query: 183  GLDPKNKLKSTRKPESLERDKSAGSC----VEGLATVIPPVDTMVLEQIPLGDSHLSSQA 350
             L    K       E L+ D +        VE +   +  ++  +L   P  +S   S++
Sbjct: 310  ALCSNAKPTEALGLEELKIDDACTHAEEYLVETVQADVKDINQRILRDDPAAES--PSES 367

Query: 351  GTAVTGQTYNCEIEEVEAGTETQTMEKCQTSHQXXXXXXXXXXXXXXXXXXXHCSTNITV 530
                 G+T+             Q  EKC  + +                           
Sbjct: 368  FPVAEGKTF------------YQMAEKCPVNDKG-------------------------- 389

Query: 531  DRCSAEKTSISPEVEHALRVLDNAISMVRKGFSFE-----WSGFGSKNQDVLHVQKAAXX 695
                     +SP+VE AL  L+  IS++R GF  +      S F ++  + L        
Sbjct: 390  -------VCVSPKVEEALGTLEEIISVIR-GFGHDTQSNFLSIFANEGSN-LEKDALKRT 440

Query: 696  XXXXXXXXXXDGEDCQKAPKVDKMXXXXXXXXXXXXXXXIRHNNQDSPVWEVNHNKITPP 875
                      +GE C K  +   +                R+   +S   EVNHN+I P 
Sbjct: 441  ISSADGRVHSNGEVCVKPSENGTVERTSVEPRNSPGTQNSRYTGSNSQSREVNHNRIAPA 500

Query: 876  SPKQNSTPMVITQEDSWNSSQNGGVLEVPALDKMSSVDKEVTIWSNDAHDIHEGSDNGRE 1055
            SP+QN      TQ+ + + S+N  V+E P L    + +  V++            D G++
Sbjct: 501  SPEQNLLSPCETQQVALHLSRN-EVMERPMLKTSDNSEANVSV------------DEGQK 547

Query: 1056 YTKKKQRR-CCLYFFS 1100
              ++K+R  CC  F S
Sbjct: 548  LNRQKKRGFCCFNFIS 563


>ref|XP_002524087.1| conserved hypothetical protein [Ricinus communis]
            gi|223536655|gb|EEF38297.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 707

 Score =  102 bits (254), Expect = 2e-19
 Identities = 111/400 (27%), Positives = 164/400 (41%), Gaps = 39/400 (9%)
 Frame = +3

Query: 3    TIATMDIKLDFVPPSLLNFVSRQLIGSGFKLYKKTVASIAKGDEVFSKALEAPVYVHVRE 182
            TIAT+D+KLDFVPP+LLNF+SRQLIGSGF+LY+K VAS++  DE +SK LE P+Y  + E
Sbjct: 311  TIATVDLKLDFVPPTLLNFISRQLIGSGFRLYQKAVASVSNYDEDYSKILEDPMYARIHE 370

Query: 183  GLDPKNKLKSTRKPESLERDKSAGSCVEGLATVIPPVDTMVLEQ--IPLGDSHLSSQAGT 356
             L    +   T + + L+ D    SC++  +T         +EQ    + D+  S     
Sbjct: 371  ALVSVVEPNETMERQELQSD----SCLQEDSTRDMQNSLADMEQNISRIEDASESVVRNE 426

Query: 357  AVTGQTYNCEIEE--------------------VEAGTETQTMEKCQTSHQXXXXXXXXX 476
             VT +    EIEE                     E  ++    E  Q + +         
Sbjct: 427  EVTDKKTFAEIEEGETHESEGSIPLKDEIRCTKPEVHSDNHVAEILQNTRKEISEIEEEE 486

Query: 477  XXXXXXXXXXHCSTNITVDRCSAEKTSI--------SPEVEHALRVLDNAISMVRKGFSF 632
                        S +  +    A ++ +        SPEVE AL  L+ AIS+VR+  S 
Sbjct: 487  SGFSIDLEDDDRSIDEPITDKVANRSPVNWRTNIMLSPEVERALDTLETAISLVRERGSN 546

Query: 633  EWSGF----GSKNQDVLHVQKAAXXXXXXXXXXXXDGEDCQKAPKVDKM--XXXXXXXXX 794
              + F    GS+    L                  D E   +APK  +            
Sbjct: 547  SLARFSPVMGSEGFPNLQKSAERNSTFVEEDVVSSDTEVSVEAPKKGRTVERTSHDSKNS 606

Query: 795  XXXXXXIRHNNQDSPVWEVNHNKITP-PSPKQNSTPMVITQEDSWNSSQNGGVLEVPALD 971
                        +S   E+NHNKI P  SP+Q  +P   ++ +    S   G+ +    D
Sbjct: 607  SGNHDVSWRTGSNSFTREMNHNKIAPAASPEQFLSP--ASESNQVLGSSRVGITDRSIKD 664

Query: 972  KMSSVDKEVTIWSNDAHD--IHEGSDNGREYTKKKQRRCC 1085
                 DK++    N  H+  +HE +   R+   K  R CC
Sbjct: 665  PTLGDDKQMRGGVNGFHENGMHEENKLSRQ---KNHRFCC 701


>ref|XP_004161285.1| PREDICTED: uncharacterized LOC101210898 [Cucumis sativus]
          Length = 612

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 12/218 (5%)
 Frame = +3

Query: 3   TIATMDIKLDFVPPSLLNFVSRQLIGSGFKLYKKTVASIAKGDEVFSKALEAPVYVHVRE 182
           TIA MD+KLDFVPPSL+NFVSRQLIGSGF+LY+K V S  K DE F KAL+ P+Y  + E
Sbjct: 242 TIANMDMKLDFVPPSLINFVSRQLIGSGFRLYQKVVGSF-KSDEDFMKALKDPLYTRINE 300

Query: 183 GLDPKNKLKSTRKPESLERDKSAGSCVEGLATVIPPVDTMVLEQIPLGDSHLSSQAGTAV 362
            L  +N      + E + ++K  G  ++                    +  L  Q   ++
Sbjct: 301 ALYQRN------RKEKVFKEKEVGYQIDQAGVHY------------FQEEQLKEQEENSM 342

Query: 363 TGQTYNCEIEEVEAGTETQTMEKCQTSH----QXXXXXXXXXXXXXXXXXXXHCSTNITV 530
             QT N      +A   T+T+E  +T      +                       N  +
Sbjct: 343 EDQTVNV---IYDANEPTKTIEINETKSFGEIEEEESKESRDDKEEEEEEEDEEDKNDIL 399

Query: 531 DRCSAEKTS--------ISPEVEHALRVLDNAISMVRK 620
           D   AEK++        ISPEVE AL+ LD  I+M+RK
Sbjct: 400 DISIAEKSNFKGKRISVISPEVEKALQTLDEVINMMRK 437


>ref|NP_001143101.1| uncharacterized protein LOC100275578 [Zea mays]
           gi|195614334|gb|ACG28997.1| hypothetical protein [Zea
           mays] gi|413925322|gb|AFW65254.1| hypothetical protein
           ZEAMMB73_259336 [Zea mays] gi|413925323|gb|AFW65255.1|
           hypothetical protein ZEAMMB73_259336 [Zea mays]
          Length = 546

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
 Frame = +3

Query: 6   IATMDIKLDFVPPSLLNFVSRQLIGSGFKLYKKTVASIAKGDEVFSKALEAPVYVHVREG 185
           IA MDIKLDFVPP L+NF+SRQLIGSG KLY+K V+++A  D+ + KAL  P+YV +RE 
Sbjct: 250 IANMDIKLDFVPPWLINFMSRQLIGSGHKLYQKAVSTVASHDDDYRKALRGPLYVRIREY 309

Query: 186 LDPKNKLKSTRKPESLERDKSAGSCVEGLATVIPPVDTMVLEQIPLGDSHLSSQAGTAVT 365
            D  +K K     E+              AT  PP              + ++Q   ++T
Sbjct: 310 QDSDDKAKVAATEEN--------------ATEAPP-------------DNATTQNRLSLT 342

Query: 366 GQTYNCEIEEVEAGTETQTMEKCQTSHQXXXXXXXXXXXXXXXXXXXHCSTNITVDRC-- 539
               N EI E      + T++   TS Q                        + V++   
Sbjct: 343 NTVSNSEIVEESEQNTSVTVDSLPTSQQPY----------------------VPVEQAWQ 380

Query: 540 SAEKTSISPEVEHALRVLDNAISMVR 617
              +   SPEVE AL +LD +I+++R
Sbjct: 381 VGNRPYTSPEVERALCILDTSIALLR 406


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