BLASTX nr result

ID: Coptis24_contig00006844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006844
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indi...    64   2e-08
ref|NP_001168586.1| uncharacterized protein LOC100382370 [Zea ma...    64   3e-08
gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japo...    61   2e-07
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    59   8e-07
ref|XP_002437558.1| hypothetical protein SORBIDRAFT_10g029370 [S...    59   1e-06

>gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indica Group]
          Length = 334

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = -1

Query: 579 SQLPRHLTDSIIERL-DLNDLIRFSCVSPTRRSFAASLLPPKLNLPWLIVPYNKCTLHNF 403
           +QLP  L D++ +R   + D +R   V  + RSF    L P+   PWL++PY+ C+    
Sbjct: 6   AQLPDDLLDNVAQRTAGIKDYVRLRAVCKSWRSF----LRPRSRPPWLMLPYDPCSE--- 58

Query: 402 FNETLGFFSFQDHKVYKIETPELRSRRICGSCKGGWLISLHDNGEIQINHPFTHAVVHLP 223
            +   GF    D  V++I+ P+ R +R CGS   GWL+ L    ++ + +P T   V LP
Sbjct: 59  -SCVRGFLDASDGTVHEIDLPDTRGKRCCGS-SHGWLV-LERWPDVWLLNPATRERVQLP 115

Query: 222 PITK 211
           P+ +
Sbjct: 116 PLMR 119


>ref|NP_001168586.1| uncharacterized protein LOC100382370 [Zea mays]
           gi|223949381|gb|ACN28774.1| unknown [Zea mays]
           gi|413943184|gb|AFW75833.1| hypothetical protein
           ZEAMMB73_857643 [Zea mays]
          Length = 460

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
 Frame = -1

Query: 579 SQLPRHLTDSIIERLDLNDLIRFSCVSPTRRSF----AASLLPPKLNLPWLIVPYNKCTL 412
           + LPR L +S++ RL + DL+RF  V    +S     AA L     + PWL++P+N    
Sbjct: 11  ADLPRDLLESVLARLPVPDLVRFPAVCTAWQSVHAAAAARLRQATPSSPWLMLPFNPTAR 70

Query: 411 HNFFNE--TLGFFSFQDHKVYKIETPELRSR-RIC-GSCKGGWLISLHDNGEIQINHPFT 244
                +     F S  + +VY I  P   +R R+C GS   GWL++     E+ + +P T
Sbjct: 71  AGGVAKLSVARFLSLAEGRVYVIRQPAPAARDRLCVGSSADGWLVTADARSELSLLNPIT 130

Query: 243 HAVVHLPPITKL 208
            A + LPP   L
Sbjct: 131 GAQLRLPPAATL 142


>gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japonica Group]
          Length = 234

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = -1

Query: 579 SQLPRHLTDSIIERL-DLNDLIRFSCVSPTRRSFAASLLPPKLNLPWLIVPYNKCTLHNF 403
           +QLP  L D++ +R   + D +R   V  + RSF    L P+   PWL++PY+ C+    
Sbjct: 6   AQLPDDLLDNVAQRTAGIKDYVRLRAVCKSWRSF----LRPRSRPPWLMLPYDPCSE--- 58

Query: 402 FNETLGFFSFQDHKVYKIETPELRSRRICGSCKGGWLISLHDNGEIQINHPFTHAVVHLP 223
            +   GF    D  V++I+ P+ R +R CGS   GWL+ L    ++ + +  T   V LP
Sbjct: 59  -SCVRGFLDASDGTVHEIDLPDTRGKRCCGS-SHGWLV-LERWPDVWLLNRATRERVQLP 115

Query: 222 PITK 211
           P+ +
Sbjct: 116 PLMR 119


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
 Frame = -1

Query: 579 SQLPRHLTDSIIERLDLNDLIRFSCVSPTRRSFAASLLPPK-----LNLPWLIVPYNKCT 415
           S+LP+ L  +I ++   ++ + +       +S+  S +P K       LPWL++PY+K  
Sbjct: 5   SELPQELLQTITQKQ--SNYVDYISTRAVCKSWW-SAIPKKPHDLLCQLPWLLLPYHKNN 61

Query: 414 LHNFFNETLGFFSFQDHKVYKIETPELRSRRICGSCKGGWLISLHDNGEIQINHPFTHAV 235
            ++      GF++  D K Y +E PE   +R CGS   GWL+ + D   I + +P T A 
Sbjct: 62  PNH-----RGFYNLADGKTYHLELPETIEKRCCGS-SHGWLVMVEDTPSIFLLNPLTKAR 115

Query: 234 VHLPPIT 214
           + LP ++
Sbjct: 116 IELPSLS 122


>ref|XP_002437558.1| hypothetical protein SORBIDRAFT_10g029370 [Sorghum bicolor]
           gi|241915781|gb|EER88925.1| hypothetical protein
           SORBIDRAFT_10g029370 [Sorghum bicolor]
          Length = 459

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
 Frame = -1

Query: 579 SQLPRHLTDSIIERLDLNDLIRFSCVSPTRRSF--AASLLPPKLNLPWLIVPYNKCTLHN 406
           + LPR L +S++ RL + D +RF  V    +S   AA +    L+ PWL++P+N     +
Sbjct: 15  ADLPRDLLESVLARLPVPDRVRFPAVCTAWQSAHTAAGIQHAALS-PWLMLPFNPTARVD 73

Query: 405 FFNETLG---------FFSFQDHKVYKIETPELRSR-RIC-GSCKGGWLISLHDNGEIQI 259
             ++  G         F S  + + Y I  P   +R R+C GS   GWL++     E+ +
Sbjct: 74  SVDDNDGSCAKLTVVRFLSLAEDRAYAIRQPAPAARERLCVGSSPDGWLVTADACSELSL 133

Query: 258 NHPFTHAVVHLPPITKL 208
            +P T A + LPP   L
Sbjct: 134 LNPVTGAQLRLPPAATL 150


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