BLASTX nr result

ID: Coptis24_contig00006825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006825
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g...    62   6e-08
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]    62   6e-08

>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
           product [Vitis vinifera]
          Length = 676

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = +1

Query: 160 KGGGREYQAPRYPAQPTPSRFPNISSSMQIRIPNSAISSVLGAGGSNISNIGQ 318
           KGGG EY+   YP  P  + + N++SSM+ +IPN+++SSV+G GG N++N+ +
Sbjct: 520 KGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSE 572


>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
          Length = 668

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = +1

Query: 160 KGGGREYQAPRYPAQPTPSRFPNISSSMQIRIPNSAISSVLGAGGSNISNIGQ 318
           KGGG EY+   YP  P  + + N++SSM+ +IPN+++SSV+G GG N++N+ +
Sbjct: 548 KGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSE 600


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