BLASTX nr result

ID: Coptis24_contig00006822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006822
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265055.1| PREDICTED: LRR receptor-like serine/threonin...   363   3e-98
emb|CBI41043.3| unnamed protein product [Vitis vinifera]              356   5e-96
ref|XP_002320014.1| predicted protein [Populus trichocarpa] gi|1...   355   8e-96
ref|XP_002310881.1| predicted protein [Populus trichocarpa] gi|2...   355   1e-95
ref|XP_002530612.1| serine-threonine protein kinase, plant-type,...   353   3e-95

>ref|XP_002265055.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
           [Vitis vinifera]
          Length = 270

 Score =  363 bits (933), Expect = 3e-98
 Identities = 186/276 (67%), Positives = 207/276 (75%)
 Frame = -1

Query: 936 MSSWGSYIVISFLPFLFLTCYYIQPTSADPDDEACLTNLKASLEDPTNSLRNWTKTTFAN 757
           M  WG  +V        L C  +  + +DPDDEACLT+L  SLEDPT SL+NWTK+TFAN
Sbjct: 1   MGVWGVVLVC------LLICARVPSSWSDPDDEACLTHLSESLEDPTKSLQNWTKSTFAN 54

Query: 756 PCSGFTSYLQGATCNNGRIYKLSLPNLSLRGSISPYLSNCTNLQSLDLSSNAITGSIPPD 577
            CSGFTSYLQGATCNNGRIYKLSL NLSLRGSISPYLSNCTNLQSLDLSSN++TG IP D
Sbjct: 55  ACSGFTSYLQGATCNNGRIYKLSLTNLSLRGSISPYLSNCTNLQSLDLSSNSLTGPIPSD 114

Query: 576 LQIXXXXXXXXXXXXXXNGPIPPQLALCAYLNVIDLHNNLLSGQIPQQLGSLVRLSAFDV 397
           LQ               +G IPPQLA CAYLNVIDLH+N LSG IPQQ G LVRLSAFDV
Sbjct: 115 LQSLVNLAVLNLSSNHLDGEIPPQLAFCAYLNVIDLHDNSLSGPIPQQFGLLVRLSAFDV 174

Query: 396 SNNRLSGPVPISLGNRSGNLPKFNATSFQGNKDLFGYPLPPSKGKGLSIMAXXXXXXXXX 217
           SNNRLSGP+P +LGNRSGN P+FNA+SF+GNKDL+GYPL P K +GLSI+A         
Sbjct: 175 SNNRLSGPIPPNLGNRSGNFPRFNASSFEGNKDLYGYPLAPLKSRGLSILAIVGIGLGSG 234

Query: 216 XXXXXXXFTAVCIWLRVTEHGMSAEEGKISQLMPDY 109
                  FTAVCIWLRVTE  M++EEGKISQLMPDY
Sbjct: 235 FVSLVLSFTAVCIWLRVTEEKMASEEGKISQLMPDY 270


>emb|CBI41043.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  356 bits (914), Expect = 5e-96
 Identities = 179/247 (72%), Positives = 196/247 (79%)
 Frame = -1

Query: 849 PDDEACLTNLKASLEDPTNSLRNWTKTTFANPCSGFTSYLQGATCNNGRIYKLSLPNLSL 670
           PDDEACLT+L  SLEDPT SL+NWTK+TFAN CSGFTSYLQGATCNNGRIYKLSL NLSL
Sbjct: 37  PDDEACLTHLSESLEDPTKSLQNWTKSTFANACSGFTSYLQGATCNNGRIYKLSLTNLSL 96

Query: 669 RGSISPYLSNCTNLQSLDLSSNAITGSIPPDLQIXXXXXXXXXXXXXXNGPIPPQLALCA 490
           RGSISPYLSNCTNLQSLDLSSN++TG IP DLQ               +G IPPQLA CA
Sbjct: 97  RGSISPYLSNCTNLQSLDLSSNSLTGPIPSDLQSLVNLAVLNLSSNHLDGEIPPQLAFCA 156

Query: 489 YLNVIDLHNNLLSGQIPQQLGSLVRLSAFDVSNNRLSGPVPISLGNRSGNLPKFNATSFQ 310
           YLNVIDLH+N LSG IPQQ G LVRLSAFDVSNNRLSGP+P +LGNRSGN P+FNA+SF+
Sbjct: 157 YLNVIDLHDNSLSGPIPQQFGLLVRLSAFDVSNNRLSGPIPPNLGNRSGNFPRFNASSFE 216

Query: 309 GNKDLFGYPLPPSKGKGLSIMAXXXXXXXXXXXXXXXXFTAVCIWLRVTEHGMSAEEGKI 130
           GNKDL+GYPL P K +GLSI+A                FTAVCIWLRVTE  M++EEGKI
Sbjct: 217 GNKDLYGYPLAPLKSRGLSILAIVGIGLGSGFVSLVLSFTAVCIWLRVTEEKMASEEGKI 276

Query: 129 SQLMPDY 109
           SQLMPDY
Sbjct: 277 SQLMPDY 283


>ref|XP_002320014.1| predicted protein [Populus trichocarpa] gi|118485007|gb|ABK94368.1|
           unknown [Populus trichocarpa]
           gi|222860787|gb|EEE98329.1| predicted protein [Populus
           trichocarpa]
          Length = 268

 Score =  355 bits (912), Expect = 8e-96
 Identities = 178/264 (67%), Positives = 202/264 (76%)
 Frame = -1

Query: 900 LPFLFLTCYYIQPTSADPDDEACLTNLKASLEDPTNSLRNWTKTTFANPCSGFTSYLQGA 721
           L F  LTC  +  + +DP DEACLT+L  SL+DP N L+NWT++ FA+PCSGFTSYL GA
Sbjct: 7   LLFTLLTCTNL--SKSDPSDEACLTHLSQSLKDPANLLQNWTRSNFASPCSGFTSYLPGA 64

Query: 720 TCNNGRIYKLSLPNLSLRGSISPYLSNCTNLQSLDLSSNAITGSIPPDLQIXXXXXXXXX 541
           TCNNGRIYKLSL +LSL+GS+SPYL+NCTNLQSLDLSSN ITG IP DLQ          
Sbjct: 65  TCNNGRIYKLSLTSLSLQGSLSPYLANCTNLQSLDLSSNQITGPIPADLQSLVNLAVLNL 124

Query: 540 XXXXXNGPIPPQLALCAYLNVIDLHNNLLSGQIPQQLGSLVRLSAFDVSNNRLSGPVPIS 361
                 G IPPQLA+CAYLNVIDLH+N LSGQIPQQLG LVRLSAFDVSNN+LSGP+P S
Sbjct: 125 SSNRLEGEIPPQLAMCAYLNVIDLHDNFLSGQIPQQLGLLVRLSAFDVSNNKLSGPIPAS 184

Query: 360 LGNRSGNLPKFNATSFQGNKDLFGYPLPPSKGKGLSIMAXXXXXXXXXXXXXXXXFTAVC 181
           LGNRSGNLP+FNATSF+GNKDL+GYPLPP K KGLS++A                FT VC
Sbjct: 185 LGNRSGNLPRFNATSFEGNKDLYGYPLPPMKAKGLSVLAIVGIGLGSGFASLVLSFTGVC 244

Query: 180 IWLRVTEHGMSAEEGKISQLMPDY 109
           IWL+VTE  M+ EEGKIS LMPDY
Sbjct: 245 IWLKVTEQKMALEEGKISSLMPDY 268


>ref|XP_002310881.1| predicted protein [Populus trichocarpa] gi|222853784|gb|EEE91331.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  355 bits (910), Expect = 1e-95
 Identities = 178/266 (66%), Positives = 202/266 (75%)
 Frame = -1

Query: 906 SFLPFLFLTCYYIQPTSADPDDEACLTNLKASLEDPTNSLRNWTKTTFANPCSGFTSYLQ 727
           S + F  LTC  +  + +DP DEACLT+   SL+DPT SL+NWTK+ FANPC GFTSYL 
Sbjct: 5   SVVLFTLLTCASV--SISDPSDEACLTHFTQSLKDPTKSLQNWTKSNFANPCYGFTSYLP 62

Query: 726 GATCNNGRIYKLSLPNLSLRGSISPYLSNCTNLQSLDLSSNAITGSIPPDLQIXXXXXXX 547
           GATCNNGRIYKLSL NLSL+GSISPYL+NCTNLQSLDLSSN ITG IP DLQ        
Sbjct: 63  GATCNNGRIYKLSLTNLSLQGSISPYLANCTNLQSLDLSSNQITGPIPADLQSLVNLAVL 122

Query: 546 XXXXXXXNGPIPPQLALCAYLNVIDLHNNLLSGQIPQQLGSLVRLSAFDVSNNRLSGPVP 367
                  +G IPPQ+ +CAYLNVIDLH+N LSGQIPQQLG LVRLSAFDVSNN+LSGP+P
Sbjct: 123 NLSSNRLDGEIPPQITMCAYLNVIDLHDNFLSGQIPQQLGLLVRLSAFDVSNNKLSGPIP 182

Query: 366 ISLGNRSGNLPKFNATSFQGNKDLFGYPLPPSKGKGLSIMAXXXXXXXXXXXXXXXXFTA 187
           +SLGNRSGNLP+FNATSF GNKDL+GYPLPP K KGLS++A                FT 
Sbjct: 183 VSLGNRSGNLPRFNATSFLGNKDLYGYPLPPMKTKGLSVLAIVGIGLGSGFASLVLSFTG 242

Query: 186 VCIWLRVTEHGMSAEEGKISQLMPDY 109
           VCIWL+ TE  M+ E+GKISQLMPDY
Sbjct: 243 VCIWLKATEQKMALEDGKISQLMPDY 268


>ref|XP_002530612.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223529860|gb|EEF31792.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 269

 Score =  353 bits (907), Expect = 3e-95
 Identities = 174/261 (66%), Positives = 199/261 (76%)
 Frame = -1

Query: 891 LFLTCYYIQPTSADPDDEACLTNLKASLEDPTNSLRNWTKTTFANPCSGFTSYLQGATCN 712
           L L  ++   +++DP+DEACLT+L  SL+DPTNSL+NWTK   ANPCSGF SYL GATCN
Sbjct: 9   LILLSFFTTLSTSDPNDEACLTHLSQSLKDPTNSLQNWTKPNLANPCSGFNSYLSGATCN 68

Query: 711 NGRIYKLSLPNLSLRGSISPYLSNCTNLQSLDLSSNAITGSIPPDLQIXXXXXXXXXXXX 532
           NGRIYKLSL NLSL+GSISPY+SNCTNLQ+LDLSSN++TG IP DLQ             
Sbjct: 69  NGRIYKLSLTNLSLQGSISPYISNCTNLQTLDLSSNSLTGPIPADLQYLVNLAVLNLSSN 128

Query: 531 XXNGPIPPQLALCAYLNVIDLHNNLLSGQIPQQLGSLVRLSAFDVSNNRLSGPVPISLGN 352
              G IP Q+A CAYLNVID H+N LSGQIPQQLG LVRLSAFDVSNN+LSGP+P SLGN
Sbjct: 129 RLEGEIPAQVAYCAYLNVIDFHDNFLSGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGN 188

Query: 351 RSGNLPKFNATSFQGNKDLFGYPLPPSKGKGLSIMAXXXXXXXXXXXXXXXXFTAVCIWL 172
           RSGNLP+FNATSF GNKDL+GYPLPP K KGLS++A                FT VCIWL
Sbjct: 189 RSGNLPRFNATSFGGNKDLYGYPLPPMKSKGLSVLAIVGIGLGSGFASLVLSFTGVCIWL 248

Query: 171 RVTEHGMSAEEGKISQLMPDY 109
           ++TE  M+ EEGKISQLMPDY
Sbjct: 249 KITEQKMALEEGKISQLMPDY 269


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