BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006790
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   291   8e-77
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              291   8e-77
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   285   3e-75
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   263   2e-68
ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   263   2e-68

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  291 bits (744), Expect = 8e-77
 Identities = 146/188 (77%), Positives = 169/188 (89%)
 Frame = +1

Query: 37   HVVLIQTPYEGAEEGCKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQ 216
            H VL+QTPY+GAEE CKLLF G+EPLVSQFTASYGMVLNLLAGAKVTR L + +D KV Q
Sbjct: 582  HAVLVQTPYDGAEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQ 641

Query: 217  AGRTLEEARKLVEQSFGNYVGSNVMLTAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLS 396
            AGRTLEEARKLVEQSFGNYVGSNVML AKEEL++++KEIE L++EV++DA+D+KSRK LS
Sbjct: 642  AGRTLEEARKLVEQSFGNYVGSNVMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLS 701

Query: 397  EMAYREISGLQEQLRAEKRLRTKLRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEG 576
            EMAY EI+ LQE+LRAEKRLRT+LRR+MEL RM++L+ LLKE E+GHLPF CLQYKDSE 
Sbjct: 702  EMAYNEIANLQEELRAEKRLRTELRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSED 761

Query: 577  VQHLVSAV 600
            VQHLV AV
Sbjct: 762  VQHLVPAV 769


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  291 bits (744), Expect = 8e-77
 Identities = 146/188 (77%), Positives = 169/188 (89%)
 Frame = +1

Query: 37   HVVLIQTPYEGAEEGCKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQ 216
            H VL+QTPY+GAEE CKLLF G+EPLVSQFTASYGMVLNLLAGAKVTR L + +D KV Q
Sbjct: 472  HAVLVQTPYDGAEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQ 531

Query: 217  AGRTLEEARKLVEQSFGNYVGSNVMLTAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLS 396
            AGRTLEEARKLVEQSFGNYVGSNVML AKEEL++++KEIE L++EV++DA+D+KSRK LS
Sbjct: 532  AGRTLEEARKLVEQSFGNYVGSNVMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLS 591

Query: 397  EMAYREISGLQEQLRAEKRLRTKLRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEG 576
            EMAY EI+ LQE+LRAEKRLRT+LRR+MEL RM++L+ LLKE E+GHLPF CLQYKDSE 
Sbjct: 592  EMAYNEIANLQEELRAEKRLRTELRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSED 651

Query: 577  VQHLVSAV 600
            VQHLV AV
Sbjct: 652  VQHLVPAV 659


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  285 bits (730), Expect = 3e-75
 Identities = 143/188 (76%), Positives = 170/188 (90%)
 Frame = +1

Query: 37   HVVLIQTPYEGAEEGCKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQ 216
            HVVL+QTPYEG EE CK+LF G++PLVSQFTASYGMVLNLLAGAKVTR   + D+ KVS+
Sbjct: 568  HVVLVQTPYEGPEECCKVLFSGLQPLVSQFTASYGMVLNLLAGAKVTRRSSELDEIKVSR 627

Query: 217  AGRTLEEARKLVEQSFGNYVGSNVMLTAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLS 396
            AGRTLEEARKL+EQSFGNYVGSNVML AKEEL++I+KEIE LT+E+SE+A+D+KS+K L+
Sbjct: 628  AGRTLEEARKLIEQSFGNYVGSNVMLAAKEELARIEKEIETLTSEISEEAIDRKSQKLLA 687

Query: 397  EMAYREISGLQEQLRAEKRLRTKLRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEG 576
            + AY+EI+ LQE+LRAEKRLRT+LRRKMELER+ SL+PLLKELEDGHLPF  L Y DS+G
Sbjct: 688  QTAYQEIAELQEELRAEKRLRTELRRKMELERVFSLKPLLKELEDGHLPFMSLHYSDSDG 747

Query: 577  VQHLVSAV 600
            VQHLV+AV
Sbjct: 748  VQHLVAAV 755


>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Cucumis sativus]
          Length = 1168

 Score =  263 bits (671), Expect = 2e-68
 Identities = 135/188 (71%), Positives = 158/188 (84%)
 Frame = +1

Query: 37   HVVLIQTPYEGAEEGCKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQ 216
            HVVL+QTPYEGAEE CKLLF GIEPLVSQFTASYGMVLNLLAGAKVT    + D++K  Q
Sbjct: 585  HVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTH-TSEMDETKAFQ 643

Query: 217  AGRTLEEARKLVEQSFGNYVGSNVMLTAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLS 396
            A RTLEEARKLVEQSFGNYVGSNVML AKEEL +I+KEIE L  E++++A+D+KSRK LS
Sbjct: 644  AWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLS 703

Query: 397  EMAYREISGLQEQLRAEKRLRTKLRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEG 576
            +MAY EI+ LQE+LR EKR RT+LR++ME +R+ +L  LL+ L DGHLPF CLQYKDSEG
Sbjct: 704  DMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEG 763

Query: 577  VQHLVSAV 600
            VQH +  V
Sbjct: 764  VQHSIPTV 771


>ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            ISE2, chloroplastic-like [Cucumis sativus]
          Length = 1193

 Score =  263 bits (671), Expect = 2e-68
 Identities = 135/188 (71%), Positives = 158/188 (84%)
 Frame = +1

Query: 37   HVVLIQTPYEGAEEGCKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQ 216
            HVVL+QTPYEGAEE CKLLF GIEPLVSQFTASYGMVLNLLAGAKVT    + D++K  Q
Sbjct: 610  HVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTH-TSEMDETKAFQ 668

Query: 217  AGRTLEEARKLVEQSFGNYVGSNVMLTAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLS 396
            A RTLEEARKLVEQSFGNYVGSNVML AKEEL +I+KEIE L  E++++A+D+KSRK LS
Sbjct: 669  AWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLS 728

Query: 397  EMAYREISGLQEQLRAEKRLRTKLRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEG 576
            +MAY EI+ LQE+LR EKR RT+LR++ME +R+ +L  LL+ L DGHLPF CLQYKDSEG
Sbjct: 729  DMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEG 788

Query: 577  VQHLVSAV 600
            VQH +  V
Sbjct: 789  VQHSIPTV 796