BLASTX nr result
ID: Coptis24_contig00006773
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006773 (1140 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250... 101 4e-19 emb|CBI23073.3| unnamed protein product [Vitis vinifera] 101 4e-19 ref|XP_003522532.1| PREDICTED: uncharacterized protein LOC100803... 91 7e-16 ref|XP_003526749.1| PREDICTED: uncharacterized protein LOC100796... 89 2e-15 ref|XP_002318461.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-14 >ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250422 [Vitis vinifera] Length = 549 Score = 101 bits (251), Expect = 4e-19 Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 7/68 (10%) Frame = +3 Query: 924 VARGSCYNLRFSNG-DPEPGRCRRTDGKKWRCSRDVA------QRHMHRSRPRSRKPVEL 1082 + RGS +NLRFSNG DPEPGRCRRTDGKKWRCSRDVA +RHMHR RPRSRKPVE+ Sbjct: 149 LGRGSIFNLRFSNGADPEPGRCRRTDGKKWRCSRDVALNQKYCERHMHRGRPRSRKPVEV 208 Query: 1083 QTKINNSN 1106 +N+S+ Sbjct: 209 HADVNSSH 216 >emb|CBI23073.3| unnamed protein product [Vitis vinifera] Length = 603 Score = 101 bits (251), Expect = 4e-19 Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 7/68 (10%) Frame = +3 Query: 924 VARGSCYNLRFSNG-DPEPGRCRRTDGKKWRCSRDVA------QRHMHRSRPRSRKPVEL 1082 + RGS +NLRFSNG DPEPGRCRRTDGKKWRCSRDVA +RHMHR RPRSRKPVE+ Sbjct: 176 LGRGSIFNLRFSNGADPEPGRCRRTDGKKWRCSRDVALNQKYCERHMHRGRPRSRKPVEV 235 Query: 1083 QTKINNSN 1106 +N+S+ Sbjct: 236 HADVNSSH 243 >ref|XP_003522532.1| PREDICTED: uncharacterized protein LOC100803096 [Glycine max] Length = 592 Score = 90.5 bits (223), Expect = 7e-16 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 16/76 (21%) Frame = +3 Query: 927 ARGSC----YNLRFSNG-DPEPGRCRRTDGKKWRCSRDVA------QRHMHRSRPRSRKP 1073 +R SC +NLR +N DPEPGRCRRTDGKKWRCSRDVA +RHMHR RPRSRKP Sbjct: 186 SRSSCMDGGFNLRLANSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKP 245 Query: 1074 VELQ-----TKINNSN 1106 VE+ T INN+N Sbjct: 246 VEVNTNTTPTSINNNN 261 >ref|XP_003526749.1| PREDICTED: uncharacterized protein LOC100796948 [Glycine max] Length = 578 Score = 89.4 bits (220), Expect = 2e-15 Identities = 47/78 (60%), Positives = 54/78 (69%), Gaps = 18/78 (23%) Frame = +3 Query: 927 ARGSC----YNLRFSNG-DPEPGRCRRTDGKKWRCSRDVA------QRHMHRSRPRSRKP 1073 +R SC +NLR +N DPEPGRCRRTDGKKWRCSRDVA +RHMHR RPRSRKP Sbjct: 181 SRSSCMDGGFNLRLANSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKP 240 Query: 1074 VELQ-------TKINNSN 1106 VE+ T +NN+N Sbjct: 241 VEVNTNSTTTPTSVNNNN 258 >ref|XP_002318461.1| predicted protein [Populus trichocarpa] gi|222859134|gb|EEE96681.1| predicted protein [Populus trichocarpa] Length = 579 Score = 86.7 bits (213), Expect = 1e-14 Identities = 44/64 (68%), Positives = 48/64 (75%), Gaps = 7/64 (10%) Frame = +3 Query: 933 GSCYNLRFSNG-DPEPGRCRRTDGKKWRCSRDVA------QRHMHRSRPRSRKPVELQTK 1091 G+ N+RFSNG D EPGRCRRTDGKKWRCSRDVA +RHMHR RPRSRK VEL Sbjct: 213 GNGLNVRFSNGADLEPGRCRRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKHVELNAS 272 Query: 1092 INNS 1103 NN+ Sbjct: 273 NNNN 276