BLASTX nr result

ID: Coptis24_contig00006766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006766
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594272.1| hypothetical protein MTR_2g026420 [Medicago ...   120   3e-25
ref|XP_002522896.1| conserved hypothetical protein [Ricinus comm...   119   6e-25
ref|XP_002307908.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22
ref|XP_002522765.1| conserved hypothetical protein [Ricinus comm...   103   4e-20
dbj|BAD45825.1| unknown protein [Oryza sativa Japonica Group] gi...   101   2e-19

>ref|XP_003594272.1| hypothetical protein MTR_2g026420 [Medicago truncatula]
           gi|355483320|gb|AES64523.1| hypothetical protein
           MTR_2g026420 [Medicago truncatula]
          Length = 108

 Score =  120 bits (301), Expect = 3e-25
 Identities = 62/118 (52%), Positives = 79/118 (66%), Gaps = 5/118 (4%)
 Frame = +3

Query: 36  MALRWLVNTVCTSTFGYPKDLNTKHSHPMVYPNGD-----LINKSQPKDTYGESLKEEIC 200
           + +RWL+++ C +  GYP++   +      YPNG+     L N  +  D    S  E   
Sbjct: 3   LIIRWLLHSAC-NILGYPREDKIEG-----YPNGEVKKKCLNNLKEVSDENSSSSYE--- 53

Query: 201 ATMFQMPLHYPRYKKADYEKMEEWKVDMLLRQYGLSYEGSLSEKRSFAMGAFLWPDQY 374
              FQMPLHYPRY K DYEKMEEWKV++LL++YGLS++GSL EKRSFAMGAFLWPDQY
Sbjct: 54  ---FQMPLHYPRYTKVDYEKMEEWKVELLLKEYGLSFKGSLDEKRSFAMGAFLWPDQY 108


>ref|XP_002522896.1| conserved hypothetical protein [Ricinus communis]
           gi|223537881|gb|EEF39496.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score =  119 bits (298), Expect = 6e-25
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
 Frame = +3

Query: 36  MALRWLVNTVCTSTFGYPKDLNT--KHSHPMVYPNGDLIN---KSQPKDTYGESLKEEIC 200
           MALRWL+++ C    GYP +  +  + SH + YPN    N   KS       E   E   
Sbjct: 1   MALRWLLHSAC-HVLGYPNNEASYRQGSHVLGYPNEQHANGVMKSGKPIAEMEVKMETYP 59

Query: 201 ATMFQMPLHYPRYKKADYEKMEEWKVDMLLRQYGLSYEGSLSEKRSFAMGAFLWPDQY 374
           +  FQ+PLHYPRY K DY+KMEEW+VDMLLR+YGLS +G+L EKR+FAMG FLWPDQY
Sbjct: 60  SGGFQLPLHYPRYTKTDYQKMEEWRVDMLLREYGLSIKGTLEEKRAFAMGTFLWPDQY 117


>ref|XP_002307908.1| predicted protein [Populus trichocarpa] gi|222853884|gb|EEE91431.1|
           predicted protein [Populus trichocarpa]
          Length = 61

 Score =  109 bits (273), Expect = 4e-22
 Identities = 47/57 (82%), Positives = 54/57 (94%)
 Frame = +3

Query: 204 TMFQMPLHYPRYKKADYEKMEEWKVDMLLRQYGLSYEGSLSEKRSFAMGAFLWPDQY 374
           T FQMPLHYPRY KADYEKMEEWKVDMLLR+YG+S++G+L EKR++AMGAFLWPDQY
Sbjct: 5   TGFQMPLHYPRYAKADYEKMEEWKVDMLLREYGISFKGNLEEKRAYAMGAFLWPDQY 61


>ref|XP_002522765.1| conserved hypothetical protein [Ricinus communis]
           gi|223538003|gb|EEF39616.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 114

 Score =  103 bits (256), Expect = 4e-20
 Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
 Frame = +3

Query: 39  ALRWLVNTVCTSTFGYPKDLNT----KHSHPMVYPNGDLINKSQPKDTYGESLKEEICAT 206
           AL+W +++  T  FG+  D  T    + +     PN      +  +      +K+E    
Sbjct: 3   ALKWFLSSAFTQVFGH-MDTGTITTVQRNEVTACPNNQECVSNLKE---ARMMKKEDYPG 58

Query: 207 MFQMPLHYPRYKKADYEKMEEWKVDMLLRQYGLSYEGSLSEKRSFAMGAFLWPDQ 371
            FQ+PLHYPRY KADYEKME+W++DMLL +YGL ++G+L EKR+FAMG+FLWPDQ
Sbjct: 59  GFQVPLHYPRYSKADYEKMEDWRLDMLLNEYGLCFKGTLDEKRAFAMGSFLWPDQ 113


>dbj|BAD45825.1| unknown protein [Oryza sativa Japonica Group]
           gi|125555557|gb|EAZ01163.1| hypothetical protein
           OsI_23191 [Oryza sativa Indica Group]
          Length = 82

 Score =  101 bits (251), Expect = 2e-19
 Identities = 44/59 (74%), Positives = 48/59 (81%)
 Frame = +3

Query: 198 CATMFQMPLHYPRYKKADYEKMEEWKVDMLLRQYGLSYEGSLSEKRSFAMGAFLWPDQY 374
           C   FQMPLHYPRYKKADYE M EW+VD LLR+YGL  +G + EKR FAMGAFLWPDQY
Sbjct: 24  CGGGFQMPLHYPRYKKADYEAMPEWRVDCLLREYGLPVDGGVEEKRRFAMGAFLWPDQY 82


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