BLASTX nr result

ID: Coptis24_contig00006761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006761
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521818.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
ref|XP_003616977.1| hypothetical protein MTR_5g086360 [Medicago ...    56   3e-06
ref|XP_002527490.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002521818.1| conserved hypothetical protein [Ricinus communis]
           gi|223539031|gb|EEF40628.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/61 (59%), Positives = 40/61 (65%)
 Frame = -1

Query: 218 AGLPFPSWELIIMVWA*VRALLVLECRALRQAGFTEQRSPSALSRGRITG*CLNSPIRAW 39
           AGLP PS EL  +V A V   L+LE R LR+AGFTEQRSP AL  G ITG C   P  AW
Sbjct: 9   AGLPAPSGELSFVVLAKVGTTLLLEWRVLREAGFTEQRSPPALDSGWITGSCHLIP--AW 66

Query: 38  I 36
           +
Sbjct: 67  L 67


>ref|XP_003616977.1| hypothetical protein MTR_5g086360 [Medicago truncatula]
           gi|355518312|gb|AES99935.1| hypothetical protein
           MTR_5g086360 [Medicago truncatula]
          Length = 81

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/66 (46%), Positives = 39/66 (59%)
 Frame = +1

Query: 73  VILPRLRAEGERCSVKPA*RSALHSKTNKARTYAQTMIINSQLGKGKPAY*PHKAQPFKT 252
           VI P  RA G RCS KPA RSAL S+  + + +AQ    NSQLG+GKP Y  ++  P   
Sbjct: 16  VIPPLSRARGLRCSAKPASRSALSSRNQETKAFAQIPWPNSQLGEGKPTYCRNQPSPTSH 75

Query: 253 SPNPTI 270
           S  P +
Sbjct: 76  SHVPIL 81


>ref|XP_002527490.1| conserved hypothetical protein [Ricinus communis]
           gi|223533130|gb|EEF34888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/47 (59%), Positives = 30/47 (63%)
 Frame = -3

Query: 216 WLALSKLGVDYHGLGVGPGLVSLRV*GTASGWLHRAAFTFRSQPWED 76
           WLA SKL VD  GLG GPG +  R  GTA GW HRAA T  S  W+D
Sbjct: 3   WLARSKLRVDPCGLGEGPGSMGPRAEGTALGWFHRAAITSLSWQWKD 49


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