BLASTX nr result

ID: Coptis24_contig00006756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006756
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244...   225   3e-57
ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|2...   221   6e-56
dbj|BAJ86996.1| predicted protein [Hordeum vulgare subsp. vulgare]    219   1e-55
ref|XP_002513537.1| thump domain protein, putative [Ricinus comm...   219   1e-55
ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55

>ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244787 [Vitis vinifera]
           gi|297734958|emb|CBI17192.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/139 (78%), Positives = 123/139 (88%)
 Frame = -1

Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290
           DGDP P +IV+HMM SAA+TRKHMSRFILRVLPVE TCYASEEEIS AIKPL+EQYFP E
Sbjct: 254 DGDPSPKEIVQHMMTSAASTRKHMSRFILRVLPVEATCYASEEEISIAIKPLVEQYFPVE 313

Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110
            + P KFAVLY+AR+NTGI+RM II +VAK VPGPHKVDL+NPD +I+VQI KTVC IG 
Sbjct: 314 TQNPKKFAVLYEARSNTGIDRMKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGF 373

Query: 109 VEKYKELSKYNLRQLTSPK 53
           +EKYKEL+KYNLRQLTSPK
Sbjct: 374 LEKYKELAKYNLRQLTSPK 392


>ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|222849769|gb|EEE87316.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  221 bits (562), Expect = 6e-56
 Identities = 103/140 (73%), Positives = 125/140 (89%)
 Frame = -1

Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290
           DGDP P DIV+H+M SAA+TRKHMSRFI+R+LP+E+ CYASEEEISRAI P++E+YFP +
Sbjct: 239 DGDPCPKDIVQHIMTSAASTRKHMSRFIIRMLPIEVACYASEEEISRAIAPVVEKYFPVD 298

Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110
            + PLKFAV+Y+ARAN+GI+RM II +VAK VPGPHKVDL NPDK+I+V+I KTVC IGV
Sbjct: 299 TQDPLKFAVMYEARANSGIDRMKIINSVAKSVPGPHKVDLGNPDKTIVVEIVKTVCLIGV 358

Query: 109 VEKYKELSKYNLRQLTSPKE 50
           +EKYKELSKYNLRQLTS K+
Sbjct: 359 IEKYKELSKYNLRQLTSSKQ 378


>dbj|BAJ86996.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 431

 Score =  219 bits (559), Expect = 1e-55
 Identities = 106/140 (75%), Positives = 125/140 (89%)
 Frame = -1

Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290
           DGDPGP +IV++MM SAA+TRKHMSRFILRVLP E+ CYASEEEI+RAI PL+E+YFP E
Sbjct: 291 DGDPGPVEIVQNMMCSAASTRKHMSRFILRVLPAEVVCYASEEEITRAISPLVEKYFPKE 350

Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110
           + +  KFAVLY+AR+NTGI+RM II AVAK +P PHKVDL+NPDK+IIVQIAKT+C IGV
Sbjct: 351 SPSGHKFAVLYEARSNTGIDRMKIINAVAKSIPQPHKVDLSNPDKTIIVQIAKTICMIGV 410

Query: 109 VEKYKELSKYNLRQLTSPKE 50
           VE+YKELSK+NLRQLTSP E
Sbjct: 411 VERYKELSKFNLRQLTSPPE 430


>ref|XP_002513537.1| thump domain protein, putative [Ricinus communis]
           gi|223547445|gb|EEF48940.1| thump domain protein,
           putative [Ricinus communis]
          Length = 382

 Score =  219 bits (559), Expect = 1e-55
 Identities = 103/139 (74%), Positives = 122/139 (87%)
 Frame = -1

Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290
           DGDP P DI +H+M SAA+TRKHMSRFILRVLPVE+ CYASEEEIS+A+ P++E+YFP +
Sbjct: 244 DGDPSPKDIAQHIMTSAASTRKHMSRFILRVLPVEIACYASEEEISKAMAPIVEKYFPVD 303

Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110
            + P KFAVLY+ARANTGI+RM II +VAK VPGPHKVDLNNPDK+I+V+I KTVC IG+
Sbjct: 304 TQNPQKFAVLYEARANTGIDRMKIINSVAKSVPGPHKVDLNNPDKTIVVEIVKTVCLIGL 363

Query: 109 VEKYKELSKYNLRQLTSPK 53
           VE YK L+KYNLRQLTSPK
Sbjct: 364 VENYKGLAKYNLRQLTSPK 382


>ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|222845557|gb|EEE83104.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  219 bits (559), Expect = 1e-55
 Identities = 103/139 (74%), Positives = 124/139 (89%)
 Frame = -1

Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290
           DGDP P DIV+HMM SAA+TRKHMSRFILRVLP+E+ CYASE+EISRAI P++E+YFP +
Sbjct: 241 DGDPCPKDIVQHMMTSAASTRKHMSRFILRVLPIEVACYASEDEISRAIAPVVEKYFPVD 300

Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110
            + P KFAV+Y+ARAN+GI+RM II +VAK VPGPHKVDL+NPDK+I+V+I KT+C IGV
Sbjct: 301 TQDPQKFAVMYEARANSGIDRMKIINSVAKCVPGPHKVDLSNPDKTIVVEIVKTLCLIGV 360

Query: 109 VEKYKELSKYNLRQLTSPK 53
           +EKYKELSKYNLRQLTS K
Sbjct: 361 IEKYKELSKYNLRQLTSSK 379


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