BLASTX nr result
ID: Coptis24_contig00006756
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006756 (469 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244... 225 3e-57 ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|2... 221 6e-56 dbj|BAJ86996.1| predicted protein [Hordeum vulgare subsp. vulgare] 219 1e-55 ref|XP_002513537.1| thump domain protein, putative [Ricinus comm... 219 1e-55 ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|2... 219 1e-55 >ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244787 [Vitis vinifera] gi|297734958|emb|CBI17192.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 225 bits (574), Expect = 3e-57 Identities = 109/139 (78%), Positives = 123/139 (88%) Frame = -1 Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290 DGDP P +IV+HMM SAA+TRKHMSRFILRVLPVE TCYASEEEIS AIKPL+EQYFP E Sbjct: 254 DGDPSPKEIVQHMMTSAASTRKHMSRFILRVLPVEATCYASEEEISIAIKPLVEQYFPVE 313 Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110 + P KFAVLY+AR+NTGI+RM II +VAK VPGPHKVDL+NPD +I+VQI KTVC IG Sbjct: 314 TQNPKKFAVLYEARSNTGIDRMKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGF 373 Query: 109 VEKYKELSKYNLRQLTSPK 53 +EKYKEL+KYNLRQLTSPK Sbjct: 374 LEKYKELAKYNLRQLTSPK 392 >ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|222849769|gb|EEE87316.1| predicted protein [Populus trichocarpa] Length = 378 Score = 221 bits (562), Expect = 6e-56 Identities = 103/140 (73%), Positives = 125/140 (89%) Frame = -1 Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290 DGDP P DIV+H+M SAA+TRKHMSRFI+R+LP+E+ CYASEEEISRAI P++E+YFP + Sbjct: 239 DGDPCPKDIVQHIMTSAASTRKHMSRFIIRMLPIEVACYASEEEISRAIAPVVEKYFPVD 298 Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110 + PLKFAV+Y+ARAN+GI+RM II +VAK VPGPHKVDL NPDK+I+V+I KTVC IGV Sbjct: 299 TQDPLKFAVMYEARANSGIDRMKIINSVAKSVPGPHKVDLGNPDKTIVVEIVKTVCLIGV 358 Query: 109 VEKYKELSKYNLRQLTSPKE 50 +EKYKELSKYNLRQLTS K+ Sbjct: 359 IEKYKELSKYNLRQLTSSKQ 378 >dbj|BAJ86996.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 431 Score = 219 bits (559), Expect = 1e-55 Identities = 106/140 (75%), Positives = 125/140 (89%) Frame = -1 Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290 DGDPGP +IV++MM SAA+TRKHMSRFILRVLP E+ CYASEEEI+RAI PL+E+YFP E Sbjct: 291 DGDPGPVEIVQNMMCSAASTRKHMSRFILRVLPAEVVCYASEEEITRAISPLVEKYFPKE 350 Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110 + + KFAVLY+AR+NTGI+RM II AVAK +P PHKVDL+NPDK+IIVQIAKT+C IGV Sbjct: 351 SPSGHKFAVLYEARSNTGIDRMKIINAVAKSIPQPHKVDLSNPDKTIIVQIAKTICMIGV 410 Query: 109 VEKYKELSKYNLRQLTSPKE 50 VE+YKELSK+NLRQLTSP E Sbjct: 411 VERYKELSKFNLRQLTSPPE 430 >ref|XP_002513537.1| thump domain protein, putative [Ricinus communis] gi|223547445|gb|EEF48940.1| thump domain protein, putative [Ricinus communis] Length = 382 Score = 219 bits (559), Expect = 1e-55 Identities = 103/139 (74%), Positives = 122/139 (87%) Frame = -1 Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290 DGDP P DI +H+M SAA+TRKHMSRFILRVLPVE+ CYASEEEIS+A+ P++E+YFP + Sbjct: 244 DGDPSPKDIAQHIMTSAASTRKHMSRFILRVLPVEIACYASEEEISKAMAPIVEKYFPVD 303 Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110 + P KFAVLY+ARANTGI+RM II +VAK VPGPHKVDLNNPDK+I+V+I KTVC IG+ Sbjct: 304 TQNPQKFAVLYEARANTGIDRMKIINSVAKSVPGPHKVDLNNPDKTIVVEIVKTVCLIGL 363 Query: 109 VEKYKELSKYNLRQLTSPK 53 VE YK L+KYNLRQLTSPK Sbjct: 364 VENYKGLAKYNLRQLTSPK 382 >ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|222845557|gb|EEE83104.1| predicted protein [Populus trichocarpa] Length = 379 Score = 219 bits (559), Expect = 1e-55 Identities = 103/139 (74%), Positives = 124/139 (89%) Frame = -1 Query: 469 DGDPGPADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAE 290 DGDP P DIV+HMM SAA+TRKHMSRFILRVLP+E+ CYASE+EISRAI P++E+YFP + Sbjct: 241 DGDPCPKDIVQHMMTSAASTRKHMSRFILRVLPIEVACYASEDEISRAIAPVVEKYFPVD 300 Query: 289 AETPLKFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGV 110 + P KFAV+Y+ARAN+GI+RM II +VAK VPGPHKVDL+NPDK+I+V+I KT+C IGV Sbjct: 301 TQDPQKFAVMYEARANSGIDRMKIINSVAKCVPGPHKVDLSNPDKTIVVEIVKTLCLIGV 360 Query: 109 VEKYKELSKYNLRQLTSPK 53 +EKYKELSKYNLRQLTS K Sbjct: 361 IEKYKELSKYNLRQLTSSK 379