BLASTX nr result

ID: Coptis24_contig00006754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006754
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137438.1| PREDICTED: uncharacterized protein LOC101204...   137   2e-33
ref|XP_002514644.1| conserved hypothetical protein [Ricinus comm...   137   3e-30
ref|XP_002328665.1| predicted protein [Populus trichocarpa] gi|1...   136   5e-30
ref|XP_002265727.2| PREDICTED: uncharacterized protein LOC100243...   132   9e-29
emb|CBI15314.3| unnamed protein product [Vitis vinifera]              132   9e-29

>ref|XP_004137438.1| PREDICTED: uncharacterized protein LOC101204037 [Cucumis sativus]
           gi|449486926|ref|XP_004157444.1| PREDICTED:
           uncharacterized protein LOC101227416 [Cucumis sativus]
          Length = 197

 Score =  137 bits (346), Expect(2) = 2e-33
 Identities = 84/140 (60%), Positives = 88/140 (62%)
 Frame = +2

Query: 221 SAGTPIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLSKAEXXXXXXXXXX 400
           S   PIKLLTRVEQLKLL+KAEKAGLLS AEKAGLSLSSIEKLGLLSKAE          
Sbjct: 74  STSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAE---------- 123

Query: 401 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVLGPLCAYIVPEDYPWEVVLQVAVALTS 580
                                          L+LGP C Y+VPED  WE+VLQVAVAL S
Sbjct: 124 -------ELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALVS 176

Query: 581 IVGGSAALAASNFVSNLQRS 640
           IVGGSAA AASN VSNLQRS
Sbjct: 177 IVGGSAAFAASNLVSNLQRS 196



 Score = 31.2 bits (69), Expect(2) = 2e-33
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 4   FFNSYPTSIRSRPHQPLLVKSMAAQKPAVSTVTT 105
           F  SYP++  SR  +PL + SMA +KP  S   T
Sbjct: 16  FIYSYPSTTTSRRKRPLHLHSMATEKPLPSAAKT 49


>ref|XP_002514644.1| conserved hypothetical protein [Ricinus communis]
           gi|223546248|gb|EEF47750.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score =  137 bits (345), Expect = 3e-30
 Identities = 80/136 (58%), Positives = 88/136 (64%)
 Frame = +2

Query: 233 PIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLSKAEXXXXXXXXXXXXXX 412
           PIKLLTRVE+LKLL+KAEKAGLLS AEK GLSLS+IEKLGLLSKAE              
Sbjct: 69  PIKLLTRVEELKLLSKAEKAGLLSAAEKFGLSLSTIEKLGLLSKAEELGVLSAATDPGTP 128

Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGG 592
                                      L+LGP C Y+VPEDYPWE+VLQVAVAL S+VGG
Sbjct: 129 GALFSLSLGL-----------------LLLGPSCVYLVPEDYPWEIVLQVAVALVSVVGG 171

Query: 593 SAALAASNFVSNLQRS 640
           SAA AASN VSNLQ+S
Sbjct: 172 SAAFAASNLVSNLQKS 187


>ref|XP_002328665.1| predicted protein [Populus trichocarpa] gi|118487258|gb|ABK95457.1|
           unknown [Populus trichocarpa]
           gi|118488248|gb|ABK95943.1| unknown [Populus
           trichocarpa] gi|222838841|gb|EEE77192.1| predicted
           protein [Populus trichocarpa]
          Length = 194

 Score =  136 bits (343), Expect = 5e-30
 Identities = 81/136 (59%), Positives = 85/136 (62%)
 Frame = +2

Query: 233 PIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLSKAEXXXXXXXXXXXXXX 412
           PIKLLTRVEQLKLLTKAEKAGLLS AEK GLSLS+IEKLGLLSKAE              
Sbjct: 75  PIKLLTRVEQLKLLTKAEKAGLLSAAEKFGLSLSTIEKLGLLSKAEELGVLSAATDPGTP 134

Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGG 592
                                      L LGP CAY+VPEDYPWEV LQVAV L  + GG
Sbjct: 135 GALLSLSLGL-----------------LFLGPSCAYLVPEDYPWEVALQVAVVLLCVAGG 177

Query: 593 SAALAASNFVSNLQRS 640
           SAA AASNFVSNLQ+S
Sbjct: 178 SAAFAASNFVSNLQKS 193


>ref|XP_002265727.2| PREDICTED: uncharacterized protein LOC100243309 [Vitis vinifera]
          Length = 206

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/135 (57%), Positives = 84/135 (62%)
 Frame = +2

Query: 233 PIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLSKAEXXXXXXXXXXXXXX 412
           PIKLLTRVEQLKLLTKAEKAGLLS AEK G SLSSIEKLGLLSKAE              
Sbjct: 87  PIKLLTRVEQLKLLTKAEKAGLLSAAEKYGFSLSSIEKLGLLSKAE-------------- 132

Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGG 592
                                      L+LGP CA++VPEDYPWEV LQ+ VAL  +VGG
Sbjct: 133 ---EFGILSAATDPGTPGALLSLSLVLLLLGPSCAFLVPEDYPWEVALQLVVALVCVVGG 189

Query: 593 SAALAASNFVSNLQR 637
           SAA AASN VSNLQ+
Sbjct: 190 SAAFAASNLVSNLQK 204


>emb|CBI15314.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/135 (57%), Positives = 84/135 (62%)
 Frame = +2

Query: 233 PIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLSKAEXXXXXXXXXXXXXX 412
           PIKLLTRVEQLKLLTKAEKAGLLS AEK G SLSSIEKLGLLSKAE              
Sbjct: 41  PIKLLTRVEQLKLLTKAEKAGLLSAAEKYGFSLSSIEKLGLLSKAE-------------- 86

Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVLGPLCAYIVPEDYPWEVVLQVAVALTSIVGG 592
                                      L+LGP CA++VPEDYPWEV LQ+ VAL  +VGG
Sbjct: 87  ---EFGILSAATDPGTPGALLSLSLVLLLLGPSCAFLVPEDYPWEVALQLVVALVCVVGG 143

Query: 593 SAALAASNFVSNLQR 637
           SAA AASN VSNLQ+
Sbjct: 144 SAAFAASNLVSNLQK 158


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