BLASTX nr result

ID: Coptis24_contig00006737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006737
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147466.1| PREDICTED: aldose 1-epimerase-like [Cucumis ...   458   e-126
emb|CBI22179.3| unnamed protein product [Vitis vinifera]              458   e-126
ref|XP_002282868.1| PREDICTED: aldose 1-epimerase isoform 1 [Vit...   458   e-126
ref|XP_002282831.1| PREDICTED: aldose 1-epimerase [Vitis vinifer...   455   e-125
ref|XP_002305327.1| predicted protein [Populus trichocarpa] gi|2...   438   e-120

>ref|XP_004147466.1| PREDICTED: aldose 1-epimerase-like [Cucumis sativus]
            gi|449520918|ref|XP_004167479.1| PREDICTED: aldose
            1-epimerase-like [Cucumis sativus]
          Length = 360

 Score =  458 bits (1179), Expect = e-126
 Identities = 221/361 (61%), Positives = 280/361 (77%), Gaps = 2/361 (0%)
 Frame = -3

Query: 1192 KMFKIFFLVLAVAVVCIDISVAKLEHGPKVKFYELQKGNFSVKFTNIGASIVSVILPDRK 1013
            K+F   F V+A+AV          E   ++  +EL++G+FSVKFTN GA+IVS+++PD+ 
Sbjct: 3    KLFLALFCVIALAVFGF---ANGYEKKGEIGIFELKRGDFSVKFTNWGATIVSLLVPDKH 59

Query: 1012 GKLADVVLGFDSVKGYANNTQHLGSIVGRVANRIGGAKFTLNGITYHLIANDGNNTLHGG 833
            GKL DVVLG+DS++ Y N+T + GSIVGRVANRIGGAKFTL+G+ Y LIAN+GNNTLHGG
Sbjct: 60   GKLDDVVLGYDSIQEYQNDTTYFGSIVGRVANRIGGAKFTLDGVLYKLIANEGNNTLHGG 119

Query: 832  PNGFGDVIWRVSKYEQDGRDPYITFVYQSFDGEQRFPGNVSVHVTYKLLGEQKLSVIMKA 653
              GF DV+W+V+KY++DGR P I F Y+SFDGE+ FPG++ V  TY L+ + +L + M A
Sbjct: 120  TRGFSDVVWKVTKYQKDGRSPQIVFSYRSFDGEEGFPGDLLVTATYTLIAKNQLKLTMNA 179

Query: 652  KALNKATPVNMVQHTYWNLGGHNSGNILSNKVQLFASHITPTVQD-VPTGEIAPVKDTPF 476
            KALNK TPVN+ QHTYWNLGGHNSG+ILSN +Q+F S IT    + +PTG++ PVK TPF
Sbjct: 180  KALNKPTPVNLAQHTYWNLGGHNSGDILSNHLQIFGSRITVVDHNLIPTGKLEPVKGTPF 239

Query: 475  DFLQPRVVGSRINKLPSGYNINYVI-DGPNDHKMKKVAVVYEAKSGRMMKLWSNAPGVQF 299
            DFL+PR VGSRINKLP GY+INY + DG  +HK+KK AVV++ KSGRM++L +N PGVQF
Sbjct: 240  DFLKPRTVGSRINKLPKGYDINYALDDGTGEHKLKKAAVVHDKKSGRMLELSTNVPGVQF 299

Query: 298  YTSYWLNDVKGKGGYVYGSSAGLCLETQGFPDAVNHPNFPSVIVNPGKTYKHYMLYQFSA 119
            YT  ++ DVKGKGG+VY + A LCLETQGFPDAVNH NFPS IV P K Y H ML++FS 
Sbjct: 300  YTGNYIKDVKGKGGFVYQAHAALCLETQGFPDAVNHHNFPSTIVTPKKPYNHIMLFKFST 359

Query: 118  K 116
            K
Sbjct: 360  K 360


>emb|CBI22179.3| unnamed protein product [Vitis vinifera]
          Length = 1699

 Score =  458 bits (1179), Expect = e-126
 Identities = 224/355 (63%), Positives = 275/355 (77%), Gaps = 2/355 (0%)
 Frame = -3

Query: 1174 FLVLAVAVVCIDI-SVAKLEHGPKVKFYELQKGNFSVKFTNIGASIVSVILPDRKGKLAD 998
            F+     V C    SVAK E G     YEL+KG+FS KFT  GA+IVSV+LPD+ GKLAD
Sbjct: 7    FVCFITLVFCFATGSVAKKEDGG---IYELRKGDFSAKFTKWGAAIVSVVLPDKNGKLAD 63

Query: 997  VVLGFDSVKGYANNTQHLGSIVGRVANRIGGAKFTLNGITYHLIANDGNNTLHGGPNGFG 818
            VVLG+DS K Y N+T + G+IVGRVANRIGGA+FTLNG  Y L+ANDG N LHGGP GFG
Sbjct: 64   VVLGYDSTKEYKNDTTNFGAIVGRVANRIGGAQFTLNGTHYKLVANDGKNMLHGGPKGFG 123

Query: 817  DVIWRVSKYEQDGRDPYITFVYQSFDGEQRFPGNVSVHVTYKLLGEQKLSVIMKAKALNK 638
             V WRVSKYE+ G  PYI F Y S DGE+ FPG++   VTY L+G+ +L V MKAKALNK
Sbjct: 124  KVAWRVSKYEKGGHSPYIMFSYHSLDGEEGFPGDLIATVTYMLVGDYQLIVTMKAKALNK 183

Query: 637  ATPVNMVQHTYWNLGGHNSGNILSNKVQLFASHITPTVQD-VPTGEIAPVKDTPFDFLQP 461
            ATPVN+ QH YWNLGGH SG+ILSN++Q+F SHITP  ++ +PTG+I PVK TP+DFL+P
Sbjct: 184  ATPVNLAQHAYWNLGGHTSGDILSNEIQIFGSHITPVDKELIPTGKIVPVKGTPYDFLKP 243

Query: 460  RVVGSRINKLPSGYNINYVIDGPNDHKMKKVAVVYEAKSGRMMKLWSNAPGVQFYTSYWL 281
              +GS+INKLPSG++INYV+D    +K+   A+V+  KSGRM++L++NAPG+QFYTS  L
Sbjct: 244  CTIGSKINKLPSGFDINYVLDDTAPNKVGLAAMVHHKKSGRMLELYTNAPGLQFYTSNSL 303

Query: 280  NDVKGKGGYVYGSSAGLCLETQGFPDAVNHPNFPSVIVNPGKTYKHYMLYQFSAK 116
             DVKGKGG+VY + A LCLETQGFPD+VNHPNFPS IV PGK+Y H ML++FS +
Sbjct: 304  KDVKGKGGFVYQAHAALCLETQGFPDSVNHPNFPSQIVTPGKSYHHSMLFKFSIR 358


>ref|XP_002282868.1| PREDICTED: aldose 1-epimerase isoform 1 [Vitis vinifera]
          Length = 359

 Score =  458 bits (1179), Expect = e-126
 Identities = 224/355 (63%), Positives = 275/355 (77%), Gaps = 2/355 (0%)
 Frame = -3

Query: 1174 FLVLAVAVVCIDI-SVAKLEHGPKVKFYELQKGNFSVKFTNIGASIVSVILPDRKGKLAD 998
            F+     V C    SVAK E G     YEL+KG+FS KFT  GA+IVSV+LPD+ GKLAD
Sbjct: 7    FVCFITLVFCFATGSVAKKEDGG---IYELRKGDFSAKFTKWGAAIVSVVLPDKNGKLAD 63

Query: 997  VVLGFDSVKGYANNTQHLGSIVGRVANRIGGAKFTLNGITYHLIANDGNNTLHGGPNGFG 818
            VVLG+DS K Y N+T + G+IVGRVANRIGGA+FTLNG  Y L+ANDG N LHGGP GFG
Sbjct: 64   VVLGYDSTKEYKNDTTNFGAIVGRVANRIGGAQFTLNGTHYKLVANDGKNMLHGGPKGFG 123

Query: 817  DVIWRVSKYEQDGRDPYITFVYQSFDGEQRFPGNVSVHVTYKLLGEQKLSVIMKAKALNK 638
             V WRVSKYE+ G  PYI F Y S DGE+ FPG++   VTY L+G+ +L V MKAKALNK
Sbjct: 124  KVAWRVSKYEKGGHSPYIMFSYHSLDGEEGFPGDLIATVTYMLVGDYQLIVTMKAKALNK 183

Query: 637  ATPVNMVQHTYWNLGGHNSGNILSNKVQLFASHITPTVQD-VPTGEIAPVKDTPFDFLQP 461
            ATPVN+ QH YWNLGGH SG+ILSN++Q+F SHITP  ++ +PTG+I PVK TP+DFL+P
Sbjct: 184  ATPVNLAQHAYWNLGGHTSGDILSNEIQIFGSHITPVDKELIPTGKIVPVKGTPYDFLKP 243

Query: 460  RVVGSRINKLPSGYNINYVIDGPNDHKMKKVAVVYEAKSGRMMKLWSNAPGVQFYTSYWL 281
              +GS+INKLPSG++INYV+D    +K+   A+V+  KSGRM++L++NAPG+QFYTS  L
Sbjct: 244  CTIGSKINKLPSGFDINYVLDDTAPNKVGLAAMVHHKKSGRMLELYTNAPGLQFYTSNSL 303

Query: 280  NDVKGKGGYVYGSSAGLCLETQGFPDAVNHPNFPSVIVNPGKTYKHYMLYQFSAK 116
             DVKGKGG+VY + A LCLETQGFPD+VNHPNFPS IV PGK+Y H ML++FS +
Sbjct: 304  KDVKGKGGFVYQAHAALCLETQGFPDSVNHPNFPSQIVTPGKSYHHSMLFKFSIR 358


>ref|XP_002282831.1| PREDICTED: aldose 1-epimerase [Vitis vinifera]
            gi|296082873|emb|CBI22174.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  455 bits (1171), Expect = e-125
 Identities = 221/355 (62%), Positives = 275/355 (77%), Gaps = 2/355 (0%)
 Frame = -3

Query: 1174 FLVLAVAVVCIDI-SVAKLEHGPKVKFYELQKGNFSVKFTNIGASIVSVILPDRKGKLAD 998
            F+     V C    SVAK E G     YEL+KG+FS KFT  GA+IVSV+LPD+ GKLAD
Sbjct: 7    FVCFITLVFCFATGSVAKKEDGG---IYELRKGDFSAKFTKWGAAIVSVVLPDKNGKLAD 63

Query: 997  VVLGFDSVKGYANNTQHLGSIVGRVANRIGGAKFTLNGITYHLIANDGNNTLHGGPNGFG 818
            VVLG+DS K Y N+T + G+IVGRVANRIGGA+FTLNG  Y L+AN+G N LHGGP GFG
Sbjct: 64   VVLGYDSAKEYKNDTTNFGAIVGRVANRIGGAQFTLNGTHYKLVANEGKNMLHGGPKGFG 123

Query: 817  DVIWRVSKYEQDGRDPYITFVYQSFDGEQRFPGNVSVHVTYKLLGEQKLSVIMKAKALNK 638
             V WRVSKY++ G  PYI F Y S DGE+ FPG++   VTY L+G+ +L V MKAKALNK
Sbjct: 124  KVAWRVSKYKKGGHSPYIMFSYHSLDGEEGFPGDLIATVTYMLVGDYQLIVTMKAKALNK 183

Query: 637  ATPVNMVQHTYWNLGGHNSGNILSNKVQLFASHITPTVQD-VPTGEIAPVKDTPFDFLQP 461
            ATPVN+ QH YWNLGGH SG+ILSN++Q+F SHITP  ++ +PTG+I PVK TP+DFL+P
Sbjct: 184  ATPVNLAQHAYWNLGGHTSGDILSNEIQIFGSHITPVDKELIPTGKIVPVKGTPYDFLKP 243

Query: 460  RVVGSRINKLPSGYNINYVIDGPNDHKMKKVAVVYEAKSGRMMKLWSNAPGVQFYTSYWL 281
              +GS+INKLPSG+NINYV+D    +K+   A+V+  KSGRM++L++NAPG+QFYTS +L
Sbjct: 244  CTIGSKINKLPSGFNINYVLDDTAPNKVGLAAMVHHKKSGRMLELYTNAPGLQFYTSNFL 303

Query: 280  NDVKGKGGYVYGSSAGLCLETQGFPDAVNHPNFPSVIVNPGKTYKHYMLYQFSAK 116
             D KGKGG+VY + A LCLET+GFPD+VNHPNFPS IV PGK+Y H ML++FS +
Sbjct: 304  KDEKGKGGFVYQAHAALCLETEGFPDSVNHPNFPSQIVTPGKSYHHSMLFKFSIR 358


>ref|XP_002305327.1| predicted protein [Populus trichocarpa] gi|222848291|gb|EEE85838.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  438 bits (1126), Expect = e-120
 Identities = 208/330 (63%), Positives = 258/330 (78%), Gaps = 1/330 (0%)
 Frame = -3

Query: 1108 KVKFYELQKGNFSVKFTNIGASIVSVILPDRKGKLADVVLGFDSVKGYANNTQHLGSIVG 929
            ++  YEL+KGNFSVK TN GA I+S++LPD+ GK+AD+VLG+D++K Y N++ + G+ VG
Sbjct: 28   EIGMYELKKGNFSVKLTNYGAHIISLLLPDKYGKVADIVLGYDTIKEYKNDSSNFGATVG 87

Query: 928  RVANRIGGAKFTLNGITYHLIANDGNNTLHGGPNGFGDVIWRVSKYEQDGRDPYITFVYQ 749
            RVANRI GA+FTLNG  Y L+AN+G N LHGG  GF  V+W+V KY  +GR P I F Y 
Sbjct: 88   RVANRIAGAQFTLNGTLYKLVANEGKNMLHGGRKGFSTVVWKVKKYSPEGRTPCIVFAYH 147

Query: 748  SFDGEQRFPGNVSVHVTYKLLGEQKLSVIMKAKALNKATPVNMVQHTYWNLGGHNSGNIL 569
            SFDGE+ FPG++ V V YKLLG+ KL + MKAKALNKATPVN+V H YWNLGGHNSG+IL
Sbjct: 148  SFDGEEGFPGDLHVIVGYKLLGDNKLRITMKAKALNKATPVNLVNHAYWNLGGHNSGDIL 207

Query: 568  SNKVQLFASHITPT-VQDVPTGEIAPVKDTPFDFLQPRVVGSRINKLPSGYNINYVIDGP 392
            S ++Q+FASH TP   Q +PTGEI  VK TP+DFL+P  +GS+INKL +GY+INY +DG 
Sbjct: 208  SEEIQIFASHYTPVDSQLIPTGEIVTVKGTPYDFLKPNTIGSKINKLTNGYDINYALDGS 267

Query: 391  NDHKMKKVAVVYEAKSGRMMKLWSNAPGVQFYTSYWLNDVKGKGGYVYGSSAGLCLETQG 212
             + K+KKVA+V + KSGRMM++ +N PGVQFYTS  L   KGKGG+VY   A LCLETQG
Sbjct: 268  GNDKLKKVAIVRDKKSGRMMEILTNQPGVQFYTSNTLYQ-KGKGGFVYEPYAALCLETQG 326

Query: 211  FPDAVNHPNFPSVIVNPGKTYKHYMLYQFS 122
            FPD+VNHPNFPS IVNPG  YKH ML +FS
Sbjct: 327  FPDSVNHPNFPSQIVNPGTYYKHQMLIKFS 356


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