BLASTX nr result

ID: Coptis24_contig00006706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006706
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520174.1| conserved hypothetical protein [Ricinus comm...   431   e-118
ref|XP_003631287.1| PREDICTED: uncharacterized protein LOC100260...   431   e-118
ref|XP_002272954.1| PREDICTED: uncharacterized protein LOC100260...   431   e-118
ref|XP_002312689.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
ref|XP_003613490.1| hypothetical protein MTR_5g037270 [Medicago ...   420   e-115

>ref|XP_002520174.1| conserved hypothetical protein [Ricinus communis]
            gi|223540666|gb|EEF42229.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 512

 Score =  431 bits (1109), Expect = e-118
 Identities = 203/279 (72%), Positives = 242/279 (86%)
 Frame = -2

Query: 939  SSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFRVRAKNYLRDKKKALSSNYAAYHP 760
            SS+ +LQRP+AGSQ PF P++KK+   WSHIEPGSF+VR +NYLRDKKK  +  +AAY+P
Sbjct: 225  SSKPILQRPIAGSQVPFCPMDKKMLDCWSHIEPGSFKVRGQNYLRDKKKEFAPAHAAYYP 284

Query: 759  FGVDVFLSQRKVDHIARFVQLPLVKLQGEFPPILVVNVQIPLYSPTIFQSENDGEGMSVV 580
            FGVDVFLS RK+DHIARFV+LP++   G+ P ILVVNVQIPLY+  +FQSE DGEGM+ V
Sbjct: 285  FGVDVFLSPRKIDHIARFVELPVINSSGKLPTILVVNVQIPLYTAALFQSEVDGEGMNFV 344

Query: 579  LYFKLSENYSKEIASHFLENFRRVINNEVENLKGFAIDAIIPIRERLKILGRVANVDDLQ 400
            LYFKLSE+YSKE+ +HF E+ RR+I++EVE +KGF +D I+P RERLKILGRV NVDDL 
Sbjct: 345  LYFKLSESYSKELPAHFQESIRRIIDDEVEKVKGFPVDTIVPYRERLKILGRVVNVDDLH 404

Query: 399  LNAAERKLMHAYNEKPILSRPQHEFYLGEDYFEIDLDMHRFNYISRKGFDAFQDRLKHCI 220
            L++AERKLM AYNEKP+LSRPQHEFYLGE+YFEID+DMHRF+YISRKGF+AF DRLK CI
Sbjct: 405  LSSAERKLMQAYNEKPVLSRPQHEFYLGENYFEIDIDMHRFSYISRKGFEAFLDRLKICI 464

Query: 219  LDLGLTIQGNKAEELPEQILCCIRLNGIDHTKYHQLESN 103
            LD+GLTIQGNKAEELPEQILCC+RLNGID+  YHQL  N
Sbjct: 465  LDVGLTIQGNKAEELPEQILCCVRLNGIDYMNYHQLGLN 503


>ref|XP_003631287.1| PREDICTED: uncharacterized protein LOC100260447 isoform 2 [Vitis
            vinifera]
          Length = 494

 Score =  431 bits (1108), Expect = e-118
 Identities = 206/277 (74%), Positives = 238/277 (85%)
 Frame = -2

Query: 942  VSSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFRVRAKNYLRDKKKALSSNYAAYH 763
            +SSR LLQRP+AGSQ PF PIEKK+  SWS+IEP +F+VR +NY RDK+K  + NYAAY+
Sbjct: 211  LSSRMLLQRPIAGSQVPFCPIEKKMLDSWSNIEPSTFKVRGENYFRDKRKDFAPNYAAYY 270

Query: 762  PFGVDVFLSQRKVDHIARFVQLPLVKLQGEFPPILVVNVQIPLYSPTIFQSENDGEGMSV 583
            PFGVDVFL  +K+ HIA+FV+LP V   G+FPPILVVNVQIPLY  TIFQSE DGEGMSV
Sbjct: 271  PFGVDVFLCPQKISHIAQFVELPTVNSSGKFPPILVVNVQIPLYPATIFQSETDGEGMSV 330

Query: 582  VLYFKLSENYSKEIASHFLENFRRVINNEVENLKGFAIDAIIPIRERLKILGRVANVDDL 403
            VLYFKLSE+YSKE+ S F EN  R+I++E+E +KGF +DAI+P RERLK+LGRV NV+DL
Sbjct: 331  VLYFKLSESYSKELPSCFQENIGRLIDDEMEKVKGFPVDAIVPFRERLKVLGRVVNVEDL 390

Query: 402  QLNAAERKLMHAYNEKPILSRPQHEFYLGEDYFEIDLDMHRFNYISRKGFDAFQDRLKHC 223
             L+ AERKLM AYNEKP LSRPQHEFY GE+YFEIDLDMHRF+YISRKGF+AFQDRLK C
Sbjct: 391  HLSGAERKLMQAYNEKPFLSRPQHEFYSGENYFEIDLDMHRFSYISRKGFEAFQDRLKIC 450

Query: 222  ILDLGLTIQGNKAEELPEQILCCIRLNGIDHTKYHQL 112
            +LDLGLTIQGNK EELPEQILCCIRLNGI+H  YHQL
Sbjct: 451  VLDLGLTIQGNKVEELPEQILCCIRLNGIEHINYHQL 487


>ref|XP_002272954.1| PREDICTED: uncharacterized protein LOC100260447 isoform 1 [Vitis
            vinifera] gi|296086464|emb|CBI32053.3| unnamed protein
            product [Vitis vinifera]
          Length = 510

 Score =  431 bits (1108), Expect = e-118
 Identities = 206/277 (74%), Positives = 238/277 (85%)
 Frame = -2

Query: 942  VSSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFRVRAKNYLRDKKKALSSNYAAYH 763
            +SSR LLQRP+AGSQ PF PIEKK+  SWS+IEP +F+VR +NY RDK+K  + NYAAY+
Sbjct: 227  LSSRMLLQRPIAGSQVPFCPIEKKMLDSWSNIEPSTFKVRGENYFRDKRKDFAPNYAAYY 286

Query: 762  PFGVDVFLSQRKVDHIARFVQLPLVKLQGEFPPILVVNVQIPLYSPTIFQSENDGEGMSV 583
            PFGVDVFL  +K+ HIA+FV+LP V   G+FPPILVVNVQIPLY  TIFQSE DGEGMSV
Sbjct: 287  PFGVDVFLCPQKISHIAQFVELPTVNSSGKFPPILVVNVQIPLYPATIFQSETDGEGMSV 346

Query: 582  VLYFKLSENYSKEIASHFLENFRRVINNEVENLKGFAIDAIIPIRERLKILGRVANVDDL 403
            VLYFKLSE+YSKE+ S F EN  R+I++E+E +KGF +DAI+P RERLK+LGRV NV+DL
Sbjct: 347  VLYFKLSESYSKELPSCFQENIGRLIDDEMEKVKGFPVDAIVPFRERLKVLGRVVNVEDL 406

Query: 402  QLNAAERKLMHAYNEKPILSRPQHEFYLGEDYFEIDLDMHRFNYISRKGFDAFQDRLKHC 223
             L+ AERKLM AYNEKP LSRPQHEFY GE+YFEIDLDMHRF+YISRKGF+AFQDRLK C
Sbjct: 407  HLSGAERKLMQAYNEKPFLSRPQHEFYSGENYFEIDLDMHRFSYISRKGFEAFQDRLKIC 466

Query: 222  ILDLGLTIQGNKAEELPEQILCCIRLNGIDHTKYHQL 112
            +LDLGLTIQGNK EELPEQILCCIRLNGI+H  YHQL
Sbjct: 467  VLDLGLTIQGNKVEELPEQILCCIRLNGIEHINYHQL 503


>ref|XP_002312689.1| predicted protein [Populus trichocarpa] gi|222852509|gb|EEE90056.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  421 bits (1081), Expect = e-115
 Identities = 201/278 (72%), Positives = 233/278 (83%)
 Frame = -2

Query: 939 SSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFRVRAKNYLRDKKKALSSNYAAYHP 760
           SS+T+L RP AGSQ PF P+EKK+   WS IEP SF++R KNY RDKKK  + N AAY+P
Sbjct: 85  SSKTILHRPQAGSQVPFCPVEKKMLDCWSQIEPCSFKIRGKNYFRDKKKEFAPNCAAYYP 144

Query: 759 FGVDVFLSQRKVDHIARFVQLPLVKLQGEFPPILVVNVQIPLYSPTIFQSENDGEGMSVV 580
           FGVDVFLS RK+DHIARFV LP +   G+ PPILVVNVQIPLY   IFQSE DGEG + V
Sbjct: 145 FGVDVFLSPRKIDHIARFVNLPAINSAGKVPPILVVNVQIPLYPAAIFQSETDGEGANFV 204

Query: 579 LYFKLSENYSKEIASHFLENFRRVINNEVENLKGFAIDAIIPIRERLKILGRVANVDDLQ 400
           LYFKLS++YSKE+ +HF E+ RR+I++EVE +KGF +D  IP RERLKILGRVANV+DL 
Sbjct: 205 LYFKLSDSYSKELPTHFQESIRRLIDDEVERVKGFRVDTTIPFRERLKILGRVANVEDLH 264

Query: 399 LNAAERKLMHAYNEKPILSRPQHEFYLGEDYFEIDLDMHRFNYISRKGFDAFQDRLKHCI 220
           L+AAERKLM AYNEKP+LSRPQHEFYLG +YFEID+DMHRF+YISRKGF+AF DRLK C+
Sbjct: 265 LSAAERKLMQAYNEKPVLSRPQHEFYLGHNYFEIDIDMHRFSYISRKGFEAFLDRLKICV 324

Query: 219 LDLGLTIQGNKAEELPEQILCCIRLNGIDHTKYHQLES 106
           LD+GLTIQGNK EELPEQILCCIRLNGID+  YHQL S
Sbjct: 325 LDVGLTIQGNKVEELPEQILCCIRLNGIDYMNYHQLFS 362


>ref|XP_003613490.1| hypothetical protein MTR_5g037270 [Medicago truncatula]
            gi|355514825|gb|AES96448.1| hypothetical protein
            MTR_5g037270 [Medicago truncatula]
          Length = 489

 Score =  420 bits (1079), Expect = e-115
 Identities = 199/276 (72%), Positives = 233/276 (84%)
 Frame = -2

Query: 939  SSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFRVRAKNYLRDKKKALSSNYAAYHP 760
            SS+TL QRP+AGSQ PF PI+KK+   WSHIEPG+F+VR+ NY +D+KK  + NY+AY+P
Sbjct: 208  SSKTL-QRPIAGSQVPFCPIDKKMLDCWSHIEPGTFKVRSVNYFKDRKKEFAPNYSAYYP 266

Query: 759  FGVDVFLSQRKVDHIARFVQLPLVKLQGEFPPILVVNVQIPLYSPTIFQSENDGEGMSVV 580
            FGVDVFLS RKVDHIARFV+LP V    +FPPILVVNVQIPLY  T+FQ E DGEG S V
Sbjct: 267  FGVDVFLSPRKVDHIARFVELPNVSSTAKFPPILVVNVQIPLYPTTLFQGEIDGEGASFV 326

Query: 579  LYFKLSENYSKEIASHFLENFRRVINNEVENLKGFAIDAIIPIRERLKILGRVANVDDLQ 400
            LYFKLSE+Y+KE+  HF EN R+++++EVE +KGF +D I P RERLKILGRV N++DL 
Sbjct: 327  LYFKLSESYAKELPQHFQENIRKLMDDEVEKVKGFPVDTIAPFRERLKILGRVGNIEDLH 386

Query: 399  LNAAERKLMHAYNEKPILSRPQHEFYLGEDYFEIDLDMHRFNYISRKGFDAFQDRLKHCI 220
            L+AAERKLM AYNEKP+LSRPQHEFY GE+YFEID+DMHRF YISRKGF+AF DRLK C 
Sbjct: 387  LSAAERKLMQAYNEKPVLSRPQHEFYSGENYFEIDIDMHRFGYISRKGFEAFMDRLKICT 446

Query: 219  LDLGLTIQGNKAEELPEQILCCIRLNGIDHTKYHQL 112
            LD+GLTIQGNK EELPEQ+LCCIRLNGIDH  YHQL
Sbjct: 447  LDIGLTIQGNKVEELPEQVLCCIRLNGIDHLNYHQL 482


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