BLASTX nr result

ID: Coptis24_contig00006678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006678
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-...   416   e-113
emb|CBI20351.3| unnamed protein product [Vitis vinifera]              399   e-109
ref|XP_002532683.1| NAC domain-containing protein, putative [Ric...   397   e-108
ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trich...   395   e-107
ref|XP_002519008.1| transcription factor, putative [Ricinus comm...   395   e-107

>ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-like [Vitis vinifera]
          Length = 353

 Score =  416 bits (1068), Expect = e-113
 Identities = 212/354 (59%), Positives = 253/354 (71%), Gaps = 18/354 (5%)
 Frame = +3

Query: 147  MESIDXXXXXXXXXXXXXYRFHPTDEELVVHYLKKKIASAPLPVSIIAEVDLYKFDPWEL 326
            MES D             +RFHPTDEELVVHYLKKK +SAPLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSPQPQLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWEL 60

Query: 327  PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 506
            P KA+FG+QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKP+LT+GGTQK+GVKKAL
Sbjct: 61   PAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKAL 120

Query: 507  VFYSGKPPKGIKTNWIMHEYRLTDNSGVMKPP----GTKKNSSRLDDWVLCRIYRKNNSQ 674
            VFY GKPPKGIKTNWIMHEYRL DN    KPP    G KKNS RLDDWVLCRIY+KNN+ 
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLADNKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNTH 180

Query: 675  RSLECDKEVSMDNGHTPLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLL-SDSIN 851
            R+L+ DK+ SMD+   P+ TSI   Q + + Q PK  N    LEN ++ FEG++ SD IN
Sbjct: 181  RTLDPDKDDSMDDMLGPVPTSISMGQQSLKLQFPKVPNYSALLENEQSLFEGMINSDGIN 240

Query: 852  NSNVVSQLGSASSKPD-------------VSKRTLPSHYWNEAAAGSEASQADKRFQGNL 992
            +S  +SQL  +SSKPD               KRTLPS YWN+      ++   KRFQ   
Sbjct: 241  SSGTISQLACSSSKPDHLSLVAATTSSILPLKRTLPSLYWNDDDTAGPST--TKRFQAEN 298

Query: 993  NNSSVTGTNNQSNSVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINW 1154
             + ++  T + +NS+A LL+Q+PQ  S  H Q +LGS+ +GV+R  FQ+ G+NW
Sbjct: 299  TDGNIGRTTDGNNSIATLLSQLPQTPS-LHQQSMLGSLGEGVFRQPFQLPGMNW 351


>emb|CBI20351.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  399 bits (1026), Expect = e-109
 Identities = 205/341 (60%), Positives = 246/341 (72%), Gaps = 5/341 (1%)
 Frame = +3

Query: 147  MESIDXXXXXXXXXXXXXYRFHPTDEELVVHYLKKKIASAPLPVSIIAEVDLYKFDPWEL 326
            MES D             +RFHPTDEELVVHYLKKK +SAPLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSPQPQLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWEL 60

Query: 327  PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 506
            P KA+FG+QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKP+LT+GGTQK+GVKKAL
Sbjct: 61   PAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKAL 120

Query: 507  VFYSGKPPKGIKTNWIMHEYRLTDNSGVMKPP----GTKKNSSRLDDWVLCRIYRKNNSQ 674
            VFY GKPPKGIKTNWIMHEYRL DN    KPP    G KKNS RLDDWVLCRIY+KNN+ 
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLADNKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNTH 180

Query: 675  RSLECDKEVSMDNGHTPLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLL-SDSIN 851
            R+L+ DK+ SMD+   P+ TSI   Q + + Q PK  N    LEN ++ FEG++ SD IN
Sbjct: 181  RTLDPDKDDSMDDMLGPVPTSISMGQQSLKLQFPKVPNYSALLENEQSLFEGMINSDGIN 240

Query: 852  NSNVVSQLGSASSKPDVSKRTLPSHYWNEAAAGSEASQADKRFQGNLNNSSVTGTNNQSN 1031
             +       ++S  P   KRTLPS YWN+      ++   KRFQ    + ++  T + +N
Sbjct: 241  TT-------TSSILP--LKRTLPSLYWNDDDTAGPST--TKRFQAENTDGNIGRTTDGNN 289

Query: 1032 SVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINW 1154
            S+A LL+Q+PQ  S  H Q +LGS+ +GV+R  FQ+ G+NW
Sbjct: 290  SIATLLSQLPQTPS-LHQQSMLGSLGEGVFRQPFQLPGMNW 329


>ref|XP_002532683.1| NAC domain-containing protein, putative [Ricinus communis]
            gi|223527580|gb|EEF29696.1| NAC domain-containing
            protein, putative [Ricinus communis]
          Length = 346

 Score =  397 bits (1020), Expect = e-108
 Identities = 203/347 (58%), Positives = 249/347 (71%), Gaps = 11/347 (3%)
 Frame = +3

Query: 147  MESIDXXXXXXXXXXXXXYRFHPTDEELVVHYLKKKIASAPLPVSIIAEVDLYKFDPWEL 326
            MES D             +RFHPTDEELVVHYLKKK +SAPLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWEL 60

Query: 327  PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 506
            P KATFG+QEWYFFSPRDRKYPNG RPNRAATSGYWKATGTDKP+LT+GGTQK+GVKKAL
Sbjct: 61   PAKATFGEQEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKAL 120

Query: 507  VFYSGKPPKGIKTNWIMHEYRLTDNSGVMKPPG----TKKNSSRLDDWVLCRIYRKNNSQ 674
            VFY GKPPKGIKTNWIMHEYRL DN    KPPG     KKNS RLDDWVLCRIY+KNN+ 
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLADNKVSNKPPGCDLANKKNSLRLDDWVLCRIYKKNNTN 180

Query: 675  RSLECDKEVSMDNGHTPLVTSI-IGRQHNFEPQVPKSTNCGMFLENNETFFEGLLSDSIN 851
            R ++ +K+ SM++    +  S+ IG Q N   Q+ K TN G  +EN+ +FF      SI+
Sbjct: 181  RPMDQEKDDSMEDMLGSIPPSLTIGSQQNARLQLLKGTNYGTLVENDTSFFN---DHSIS 237

Query: 852  NSNVVSQLGSAS-SKP-DVS----KRTLPSHYWNEAAAGSEASQADKRFQGNLNNSSVTG 1013
            N+N +SQL S++ S+P D+S    KRTLPS YW++    + +  + KR+QG+        
Sbjct: 238  NTNSISQLASSTCSRPGDLSMLPLKRTLPSLYWSDDVDMAASPSSSKRYQGDHTGDESVV 297

Query: 1014 TNNQSNSVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINW 1154
             ++ + S  +LL+Q+PQ       Q  LGSI DG++RP +Q+SG+NW
Sbjct: 298  RSDGNGSFVSLLSQLPQTPPLHQQQATLGSIGDGIFRPPYQLSGLNW 344


>ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222859984|gb|EEE97531.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 355

 Score =  395 bits (1016), Expect = e-107
 Identities = 199/331 (60%), Positives = 241/331 (72%), Gaps = 13/331 (3%)
 Frame = +3

Query: 201  YRFHPTDEELVVHYLKKKIASAPLPVSIIAEVDLYKFDPWELPGKATFGDQEWYFFSPRD 380
            +RFHPTDEELVVHYLKKK  SAPLP++IIAEVDLYKFDPWELP KATFG+QEWYFFSPRD
Sbjct: 27   FRFHPTDEELVVHYLKKKTTSAPLPMAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRD 86

Query: 381  RKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKALVFYSGKPPKGIKTNWIMH 560
            RKYPNG RPNRAATSGYWKATGTDKPILT GGTQK+GVKKALVFY GKPPKGIKTNWIMH
Sbjct: 87   RKYPNGTRPNRAATSGYWKATGTDKPILTLGGTQKVGVKKALVFYGGKPPKGIKTNWIMH 146

Query: 561  EYRLTDNSGVMKPP----GTKKNSSRLDDWVLCRIYRKNNSQRSLECDKEVSMDN--GHT 722
            EYRL DN    KPP    G KKNS RLDDWVLCRIY+KNN+ R ++ DK+  MD+  G  
Sbjct: 147  EYRLADNKVKNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRPIDHDKDDYMDDILGSI 206

Query: 723  PLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLLS--DSINNSNVVSQLGSASSKP 896
            P  + ++G   N    + K TN    L+N+   FEG++S  D I +S+ +S + S+ SKP
Sbjct: 207  P-PSILVGNHQNGTLHLAKGTNYETLLDNDHNLFEGIISSNDGIRSSSSMSHVASSVSKP 265

Query: 897  D-----VSKRTLPSHYWNEAAAGSEASQADKRFQGNLNNSSVTGTNNQSNSVANLLNQIP 1061
            D       KRTLPS YW +      +S   KRFQG++N       N+ ++S+  LL+Q+P
Sbjct: 266  DHLPMLPLKRTLPSLYWTDEDMAVPSS--SKRFQGDINGDESVVGNDGNSSIVTLLSQLP 323

Query: 1062 QQASPFHHQVLLGSISDGVYRPQFQVSGINW 1154
             Q S  H Q +LGS+ +G++RP +Q+ G+NW
Sbjct: 324  -QTSQLHQQTMLGSMGNGIFRPPYQIPGMNW 353


>ref|XP_002519008.1| transcription factor, putative [Ricinus communis]
            gi|223541671|gb|EEF43219.1| transcription factor,
            putative [Ricinus communis]
          Length = 355

 Score =  395 bits (1014), Expect = e-107
 Identities = 213/359 (59%), Positives = 248/359 (69%), Gaps = 22/359 (6%)
 Frame = +3

Query: 147  MESIDXXXXXXXXXXXXXYRFHPTDEELVVHYLKKKIASAPLPVSIIAEVDLYKFDPWEL 326
            MES D             +RFHPTDEELVVHYLKKK ASAPLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSQHPHLPPGFRFHPTDEELVVHYLKKKAASAPLPVTIIAEVDLYKFDPWEL 60

Query: 327  PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 506
            P KATFG+QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL + G QK+GVKKAL
Sbjct: 61   PSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASNGAQKVGVKKAL 120

Query: 507  VFYSGKPPKGIKTNWIMHEYRLTD-NSGVMKPPG----TKKNSSRLDDWVLCRIYRKNNS 671
            VFY GKPPKGIKTNWIMHEYRL D N+   KPPG     KK S RLDDWVLCRIY+KNNS
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLVDNNNSSSKPPGFDLANKKGSLRLDDWVLCRIYKKNNS 180

Query: 672  QRSLECDKEVSMDNGHTPLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLLS--DS 845
            QR+++ DKE SM+     L T  I  +         +   G  L+N E FFEG+L+  D 
Sbjct: 181  QRTMDRDKEDSMEGF---LATLPINPKPASSSVSKPAHAYGSVLDNEENFFEGILTGGDG 237

Query: 846  INNSNVVSQLGSASSKPDVS------------KRTLPSHYWN-EAAAGSE--ASQADKRF 980
            + NS+V  Q  S+S K  +S            KR +PS YWN EA AGS   A+ + KRF
Sbjct: 238  MQNSSVSHQFPSSSPKQHMSIASISTSNPLAIKRVIPSQYWNHEAIAGSSIAAASSGKRF 297

Query: 981  QGNLNNSSVTGTNNQSNSVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINWN 1157
             G+LN+ S TGT + + S  +LL+Q+PQ  +PFH    +GS+ DGV R QFQ+  +NWN
Sbjct: 298  HGDLNSCS-TGTED-NTSFVSLLSQLPQAGAPFHSNTFIGSLGDGVLRQQFQLPSMNWN 354


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