BLASTX nr result

ID: Coptis24_contig00006661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006661
         (1770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280211.2| PREDICTED: nucleosome assembly protein 1-lik...   450   e-124
gb|AFW85856.1| hypothetical protein ZEAMMB73_970342 [Zea mays]        422   e-115
ref|NP_001105215.1| nucleosome/chromatin assembly factor group A...   422   e-115
ref|XP_002436481.1| hypothetical protein SORBIDRAFT_10g003450 [S...   421   e-115
emb|CBI27898.3| unnamed protein product [Vitis vinifera]              421   e-115

>ref|XP_002280211.2| PREDICTED: nucleosome assembly protein 1-like 1-like isoform 1 [Vitis
            vinifera] gi|297743095|emb|CBI35962.3| unnamed protein
            product [Vitis vinifera]
          Length = 381

 Score =  450 bits (1158), Expect = e-124
 Identities = 230/306 (75%), Positives = 246/306 (80%)
 Frame = -1

Query: 1623 NKDNFNMADLTESLPGATAALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVE 1444
            +KD FN+ADL  +LP A AALSAEDRAGLVNALK+KLQ+LAGQH DVLETLSP VRKRVE
Sbjct: 4    DKDQFNIADLGAALPAAAAALSAEDRAGLVNALKNKLQNLAGQHSDVLETLSPNVRKRVE 63

Query: 1443 VLREIQSQHDELEAKFFEERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXEAPIDQE 1264
             LREIQ QHDELEAKFFEERAALEAKYQKLYEPLY+KRY+I            EAP+DQE
Sbjct: 64   FLREIQGQHDELEAKFFEERAALEAKYQKLYEPLYTKRYEIVNGVVEVEGVTNEAPMDQE 123

Query: 1263 EGKGTEVKGVPDFWLNAMKTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFD 1084
            E K TE KGVP+FWL AMKTNEVL EEISERDE ALK+LKDIKW RI+NPKGF LEF+FD
Sbjct: 124  EDKATEEKGVPNFWLTAMKTNEVLAEEISERDEGALKYLKDIKWYRIDNPKGFKLEFYFD 183

Query: 1083 ANPYFKNSVLTKTYHMIDDDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPIT 904
            ANPYFKNS+LTKTYHMIDDDEPILEKAIGTEIEW P                     PIT
Sbjct: 184  ANPYFKNSILTKTYHMIDDDEPILEKAIGTEIEWYPGKSLTQKLLKKKPRKGSKNAKPIT 243

Query: 903  KTENCESFFNFFNPPQVPXXXXXXXXDTAEQLQNEMEQDYDIGSTIRDKIIPHAVSWFTG 724
            KTENCESFFNFFNPPQVP        D AE+LQN+MEQDYDIGSTIRDKIIPHAVSWFTG
Sbjct: 244  KTENCESFFNFFNPPQVPEDEEDIDEDVAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTG 303

Query: 723  EAVQGE 706
            EAVQG+
Sbjct: 304  EAVQGD 309



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -2

Query: 503 KSRKKPSAGPKKTGRAQIGEGQQGERPPECKQQ 405
           KSRKK S GPKK+GR++ GEGQ GERPPECKQQ
Sbjct: 349 KSRKKTSTGPKKSGRSRAGEGQLGERPPECKQQ 381


>gb|AFW85856.1| hypothetical protein ZEAMMB73_970342 [Zea mays]
          Length = 369

 Score =  422 bits (1085), Expect = e-115
 Identities = 218/306 (71%), Positives = 239/306 (78%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1620 KDNFNMADLTESLPGATAALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEV 1441
            K+ F+ +DL  SLP A AALSAEDRAGLVNALKDKLQSLAGQH DVLETLSP VRKRVE 
Sbjct: 5    KETFDTSDLNASLPAAAAALSAEDRAGLVNALKDKLQSLAGQHADVLETLSPNVRKRVEF 64

Query: 1440 LREIQSQHDELEAKFFEERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXE-APIDQE 1264
            LREIQSQHDE+EAKFFEERAALEAKYQKLYEPLY+KRY I            E A  +  
Sbjct: 65   LREIQSQHDEIEAKFFEERAALEAKYQKLYEPLYTKRYGIVNGEVEVDGVCDEPASENTV 124

Query: 1263 EGKGTEVKGVPDFWLNAMKTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFD 1084
            EGK  + KGVPDFWL AMKTNEVL+EEI ERDE ALK+LKDIKW RIE+PKGF L+FFFD
Sbjct: 125  EGKEPDAKGVPDFWLTAMKTNEVLSEEIQERDEAALKYLKDIKWSRIEDPKGFKLDFFFD 184

Query: 1083 ANPYFKNSVLTKTYHMIDDDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPIT 904
             NP+FKNSVLTKTYHM+D+D+PILEKAIGTEIEW P                     PIT
Sbjct: 185  TNPFFKNSVLTKTYHMVDEDDPILEKAIGTEIEWYPGKNLTQKILKKKPKKGSKNTKPIT 244

Query: 903  KTENCESFFNFFNPPQVPXXXXXXXXDTAEQLQNEMEQDYDIGSTIRDKIIPHAVSWFTG 724
            KTE+CESFFNFFNPPQVP        DTA++LQ++ME DYDIG+TIRDKIIPHAVSWFTG
Sbjct: 245  KTEDCESFFNFFNPPQVPEDDDDIDEDTADELQSQMEHDYDIGTTIRDKIIPHAVSWFTG 304

Query: 723  EAVQGE 706
            EAVQGE
Sbjct: 305  EAVQGE 310


>ref|NP_001105215.1| nucleosome/chromatin assembly factor group A [Zea mays]
            gi|29569109|gb|AAO84021.1| nucleosome/chromatin assembly
            factor group A [Zea mays] gi|413953208|gb|AFW85857.1|
            nucleosome/chromatin assembly factor group A [Zea mays]
          Length = 380

 Score =  422 bits (1085), Expect = e-115
 Identities = 218/306 (71%), Positives = 239/306 (78%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1620 KDNFNMADLTESLPGATAALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEV 1441
            K+ F+ +DL  SLP A AALSAEDRAGLVNALKDKLQSLAGQH DVLETLSP VRKRVE 
Sbjct: 5    KETFDTSDLNASLPAAAAALSAEDRAGLVNALKDKLQSLAGQHADVLETLSPNVRKRVEF 64

Query: 1440 LREIQSQHDELEAKFFEERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXE-APIDQE 1264
            LREIQSQHDE+EAKFFEERAALEAKYQKLYEPLY+KRY I            E A  +  
Sbjct: 65   LREIQSQHDEIEAKFFEERAALEAKYQKLYEPLYTKRYGIVNGEVEVDGVCDEPASENTV 124

Query: 1263 EGKGTEVKGVPDFWLNAMKTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFD 1084
            EGK  + KGVPDFWL AMKTNEVL+EEI ERDE ALK+LKDIKW RIE+PKGF L+FFFD
Sbjct: 125  EGKEPDAKGVPDFWLTAMKTNEVLSEEIQERDEAALKYLKDIKWSRIEDPKGFKLDFFFD 184

Query: 1083 ANPYFKNSVLTKTYHMIDDDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPIT 904
             NP+FKNSVLTKTYHM+D+D+PILEKAIGTEIEW P                     PIT
Sbjct: 185  TNPFFKNSVLTKTYHMVDEDDPILEKAIGTEIEWYPGKNLTQKILKKKPKKGSKNTKPIT 244

Query: 903  KTENCESFFNFFNPPQVPXXXXXXXXDTAEQLQNEMEQDYDIGSTIRDKIIPHAVSWFTG 724
            KTE+CESFFNFFNPPQVP        DTA++LQ++ME DYDIG+TIRDKIIPHAVSWFTG
Sbjct: 245  KTEDCESFFNFFNPPQVPEDDDDIDEDTADELQSQMEHDYDIGTTIRDKIIPHAVSWFTG 304

Query: 723  EAVQGE 706
            EAVQGE
Sbjct: 305  EAVQGE 310


>ref|XP_002436481.1| hypothetical protein SORBIDRAFT_10g003450 [Sorghum bicolor]
            gi|241914704|gb|EER87848.1| hypothetical protein
            SORBIDRAFT_10g003450 [Sorghum bicolor]
          Length = 381

 Score =  421 bits (1082), Expect = e-115
 Identities = 215/306 (70%), Positives = 239/306 (78%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1620 KDNFNMADLTESLPGATAALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEV 1441
            K+ F+++DL  SLP A AALSAEDRAGLVNALKDKLQSLAGQH DVLE+LSP VRKRVE 
Sbjct: 5    KETFDISDLNASLPAAAAALSAEDRAGLVNALKDKLQSLAGQHADVLESLSPNVRKRVEF 64

Query: 1440 LREIQSQHDELEAKFFEERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXEAPIDQ-E 1264
            LREIQSQHDE+EAKFFEERAALEAKYQKLYEPLY+KRYDI            E   +   
Sbjct: 65   LREIQSQHDEIEAKFFEERAALEAKYQKLYEPLYTKRYDIVNGVVEVDGVSDEPTSENAA 124

Query: 1263 EGKGTEVKGVPDFWLNAMKTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFD 1084
            EGK  + KGVPDFWL A+KTNEVL+EEI ERDE ALK+LKDIKW RIE+PKGF LEFFFD
Sbjct: 125  EGKEPDAKGVPDFWLTALKTNEVLSEEIQERDEPALKYLKDIKWSRIEDPKGFKLEFFFD 184

Query: 1083 ANPYFKNSVLTKTYHMIDDDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPIT 904
             NP+FKNSVLTKTYHM+D+D+PILEKAIGT+I+W P                     PIT
Sbjct: 185  TNPFFKNSVLTKTYHMVDEDDPILEKAIGTDIDWYPGKNLTQKILKKKPKKGSKNTKPIT 244

Query: 903  KTENCESFFNFFNPPQVPXXXXXXXXDTAEQLQNEMEQDYDIGSTIRDKIIPHAVSWFTG 724
            KTE+CESFFNFFNPPQVP        DTA++LQ EME DYDIG+TIRDKIIPHAVSWFTG
Sbjct: 245  KTEDCESFFNFFNPPQVPEDDEDIDEDTADELQGEMEHDYDIGTTIRDKIIPHAVSWFTG 304

Query: 723  EAVQGE 706
            EAVQG+
Sbjct: 305  EAVQGD 310


>emb|CBI27898.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  421 bits (1081), Expect = e-115
 Identities = 222/320 (69%), Positives = 241/320 (75%), Gaps = 14/320 (4%)
 Frame = -1

Query: 1623 NKDNFNMADLTESLPGATAALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVE 1444
            +K+ FNMADL  SLPGA AAL+AEDRA LVNALK+KLQ+LAGQH DVLE L+P VRKRVE
Sbjct: 4    SKETFNMADLGSSLPGAVAALNAEDRADLVNALKNKLQNLAGQHSDVLENLTPKVRKRVE 63

Query: 1443 VLREIQS--------------QHDELEAKFFEERAALEAKYQKLYEPLYSKRYDIXXXXX 1306
             LREIQ+              QHDELEAKFFEERAALEAKYQKLY+PLYSKRYDI     
Sbjct: 64   TLREIQALVNYYNLKVLQVSGQHDELEAKFFEERAALEAKYQKLYQPLYSKRYDIVNGVV 123

Query: 1305 XXXXXXXEAPIDQEEGKGTEVKGVPDFWLNAMKTNEVLTEEISERDEEALKFLKDIKWRR 1126
                   E  +DQE+    E KGVPDFWL AMKTNEVL EEISERDE ALK++KDIKW R
Sbjct: 124  EVDGVTNEVTMDQEDK--AEEKGVPDFWLTAMKTNEVLAEEISERDEGALKYIKDIKWCR 181

Query: 1125 IENPKGFMLEFFFDANPYFKNSVLTKTYHMIDDDEPILEKAIGTEIEWLPXXXXXXXXXX 946
            I+NPKGF LEFFFD NPYFKNSVLTKTYHMID+DEPILEKAIGTEIEW P          
Sbjct: 182  IDNPKGFKLEFFFDTNPYFKNSVLTKTYHMIDEDEPILEKAIGTEIEWFPGKCLTQKLLK 241

Query: 945  XXXXXXXXXXXPITKTENCESFFNFFNPPQVPXXXXXXXXDTAEQLQNEMEQDYDIGSTI 766
                       PITKTE+CESFFNFF+PPQVP        DTAE+LQN+MEQDYDIGSTI
Sbjct: 242  KKPRKGSKNAKPITKTESCESFFNFFSPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSTI 301

Query: 765  RDKIIPHAVSWFTGEAVQGE 706
            RDKIIPHAVSWFTGEA QG+
Sbjct: 302  RDKIIPHAVSWFTGEAAQGD 321


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